AMTR_s00088p00161000 (Amborella trichopoda)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 AMTR_s00088p00161000 T199802_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ERM99617 GRAS 188 558

Links

Other GRAS family TFs
Other Amborella trichopoda TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27613.m000642 Ricinus communis 27613.m000642 N 0.726
29949.m000124 Ricinus communis 29949.m000124 N 0.737
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.745
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.745
Bo2g149670 Brassica oleracea Bo2g149670 N 0.726
Bo6g022330 Brassica oleracea Bo6g022330 N 0.710
Bo7g089080 Brassica oleracea Bo7g089080 N 0.721
Bo9g009240 Brassica oleracea Bo9g009240 N 0.720
Bo9g009260 Brassica oleracea Bo9g009260 N 0.724
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.710
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.726
Bra018860 Brassica rapa Bra018860 N 0.710
Bra020715 Brassica rapa Bra020715 N 0.726
Bra026077 Brassica rapa Bra026077 N 0.719
Bra036185 Brassica rapa Bra036185 N 0.715
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.740
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.740
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.734
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.729
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.715
Ca_09786 Cicer arietinum Ca_09786 N 0.740
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.702
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.721
CIGR2 Oryza sativa OS07G0583600 N 0.716
Cla001429 Citrullus lanatus Cla001429 N 0.740
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.740
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.737
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N 0.702
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.721
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.743
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.710
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.743
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.743
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.745
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.753
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.710
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.753
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.724
GSMUA_Achr8G03610_001 Musa acuminata GSMUA_Achr8G03610_001 N 0.708
Lus10003772.g Linum usitatissimum Lus10003772.g N 0.700
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.733
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.732
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.729
MDP0000152670 Malus domestica MDP0000152670 N 0.751
MDP0000205236 Malus domestica MDP0000205236 N 0.721
MDP0000284679 Malus domestica MDP0000284679 N 0.721
MDP0000804652 Malus domestica MDP0000804652 N 0.745
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.745
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.724
PAT1 Arabidopsis thaliana AT5G48150 N 0.737
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.729
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.743
PDK_20s1421311g003 Phoenix dactylifera PDK_20s1421311g003 N 0.707
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.740
PK09018.1 Cannabis sativa PK09018.1 N 0.715
Pm012019 Prunus mume Pm012019 N 0.726
Pm015021 Prunus mume Pm015021 N 0.743
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.726
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.745
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.710
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.710
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.726
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.707
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.710
SCL5 Arabidopsis thaliana AT1G50600 N 0.710
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.724
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.740
TCM_002319 Theobroma cacao TCM_002319 N 0.753
TCM_030733 Theobroma cacao TCM_030733 N 0.749
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.711
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N 0.713
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.745