CY34DRAFT_72872 (Suillus luteus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 CY34DRAFT_72872 T206342_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
unc-62
M02185_2.00 		Caenorhabditis elegans
NHDAHANNN
NNNTDTHDN		 PBM
Weirauch et al.(2014)
pTH5781 		0.705 0.593
Meis1
M00407_2.00 		Mus musculus
NTGACADNN
NNHTGTCAN		 PBM
Berger et al.(2008)
Meis1_2335 		0.681 0.593
Meis2
M00437_2.00 		Mus musculus
NTGACANNN
NNNTGTCAN		 PBM
Berger et al.(2008)
Mrg1_2246 		0.681 0.593
Meis3
M00488_2.00 		Mus musculus
NTGACANNN
NNNTGTCAN		 PBM
Berger et al.(2008)
Mrg2_2302 		0.681 0.593
MEIS1
M03165_2.00 		Homo sapiens
NTGACAN
NTGTCAN		 SELEX
Jolma et al.(2013)
MEIS1_1 		0.681 0.593
MEIS2
M03147_2.00 		Homo sapiens
WTGACAGSTGTCAM
KTGACASCTGTCAW		 SELEX
Jolma et al.(2013)
MEIS2_1 		0.681 0.593
MEIS2
M03148_2.00 		Homo sapiens
DTGACAGS
SCTGTCAH		 SELEX
Jolma et al.(2013)
MEIS2_2 		0.681 0.593
Meis2
M03261_2.00 		Mus musculus
NTGACAN
NTGTCAN		 SELEX
Jolma et al.(2013)
Meis2_1 		0.681 0.593
Meis2
M03262_2.00 		Mus musculus
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
Meis2_2 		0.681 0.593
Meis3
M03279_2.00 		Mus musculus
NTGACAN
NTGTCAN		 SELEX
Jolma et al.(2013)
Meis3_1 		0.681 0.593
Meis3
M03280_2.00 		Mus musculus
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
Meis3_2 		0.681 0.593
MEIS2
M02740_2.00 		Homo sapiens
TGACASSTGTC
GACASSTGTCA		 SELEX
Jolma et al.(2010)
MEIS2_dimer 		0.681 0.593
MEIS2
M02741_2.00 		Homo sapiens
GGACAKNT
ANMTGTCC		 SELEX
Jolma et al.(2010)
MEIS2_monomer 		0.681 0.593
MEIS2
M05138_2.00 		Homo sapiens
TGACASSTGTCA
TGACASSTGTCA		 SELEX
Yin et al.(2017)
MEIS2_eDBD_HT-SELEX 		0.681 0.593
MEIS2
M05140_2.00 		Homo sapiens
TGACASSTGTCA
TGACASSTGTCA		 SELEX
Yin et al.(2017)
MEIS2_FL_HT-SELEX 		0.681 0.593
hth
M06490_2.00 		Drosophila melanogaster
TGACAK
MTGTCA		 B1H
Mathelier et al.(2014)
MA0227.1 		0.681 0.593
hth
M06252_2.00 		Drosophila melanogaster
TGTCA
TGACA		 B1H
Zhu et al.(2011)
Hth_Cell_FBgn0001235 		0.681 0.593
hth
M06253_2.00 		Drosophila melanogaster
NNTGACAD
HTGTCANN		 B1H
Zhu et al.(2011)
hth_SOLEXA_2_FBgn0001235 		0.681 0.593
hth
M06254_2.00 		Drosophila melanogaster
NTGACA
TGTCAN		 B1H
Zhu et al.(2011)
Hth_SOLEXA_FBgn0001235 		0.681 0.593
MEIS1
M09148_2.00 		Homo sapiens
NTGATTDATDDB
VHHATHAATCAN		 Misc
Kulakovskiy et al.(2013)
MEIS1_HUMAN.H11MO.0.A 		0.681 0.593
MEIS2
M09143_2.00 		Homo sapiens
HTGACAGBTKTBM
KVAMAVCTGTCAD		 Misc
Kulakovskiy et al.(2013)
MEIS2_HUMAN.H11MO.0.B 		0.681 0.593
Meis1
M09178_2.00 		Mus musculus
NTGATTDATDDB
VHHATHAATCAN		 Misc
Kulakovskiy et al.(2013)
MEIS1_MOUSE.H11MO.0.A 		0.681 0.593
Meis2
M09189_2.00 		Mus musculus
HTGACAGBTKTBM
KVAMAVCTGTCAD		 Misc
Kulakovskiy et al.(2013)
MEIS2_MOUSE.H11MO.0.B 		0.681 0.593
Meis1
M09568_2.00 		Mus musculus
VBTGWCASNN
NNSTGWCAVB		 Misc
Heinz et al.(2010)
MastCells-Meis1_GSE48085 		0.681 0.593
MEIS1
M10709_2.00 		Homo sapiens
NHNTGACAGNDN
NHNCTGTCANDN		 Transfac
Matys et al.(2006)
V$MEIS1_01 		0.681 0.593
MEIS1
M10710_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MEIS1_06 		0.681 0.593
MEIS2
M05139_2.00 		Homo sapiens
YGACASSYGHCR
YGDCRSSTGTCR		 SELEX
Yin et al.(2017)
MEIS2_eDBD_Methyl-HT-SELEX 		0.681 0.593
MEIS2
M05141_2.00 		Homo sapiens
TGACASSTGTCA
TGACASSTGTCA		 SELEX
Yin et al.(2017)
MEIS2_FL_Methyl-HT-SELEX 		0.681 0.593
Pknox1
M00399_2.00 		Mus musculus
HGACRNNN
NNNYGTCD		 PBM
Berger et al.(2008)
Pknox1_2364 		0.675 0.537
PKNOX1
M03178_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
PKNOX1_1 		0.675 0.537
PKNOX1
M05206_2.00 		Homo sapiens
TGACASSTGTCA
TGACASSTGTCA		 SELEX
Yin et al.(2017)
PKNOX1_eDBD_HT-SELEX 		0.675 0.537
PKNOX1
M05208_2.00 		Homo sapiens
TGACAGCTGTCA
TGACAGCTGTCA		 SELEX
Yin et al.(2017)
PKNOX1_FL_HT-SELEX 		0.675 0.537
PKNOX1
M09150_2.00 		Homo sapiens
TGABTGRCRGV
BCYGYCAVTCA		 Misc
Kulakovskiy et al.(2013)
PKNX1_HUMAN.H11MO.0.B 		0.675 0.537
Pknox1
M09175_2.00 		Mus musculus
TGABTGRCRGV
BCYGYCAVTCA		 Misc
Kulakovskiy et al.(2013)
PKNX1_MOUSE.H11MO.0.A 		0.675 0.537
PKNOX1
M10712_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PREP1_Q3 		0.675 0.537
PKNOX1
M05207_2.00 		Homo sapiens
YGWCASSTGWCR
YGWCASSTGWCR		 SELEX
Yin et al.(2017)
PKNOX1_eDBD_Methyl-HT-SELEX 		0.675 0.537
PKNOX1
M05209_2.00 		Homo sapiens
TGACABVTGTCA
TGACABVTGTCA		 SELEX
Yin et al.(2017)
PKNOX1_FL_Methyl-HT-SELEX 		0.675 0.537
Pknox2
M00468_2.00 		Mus musculus
NNNGACRNNN
NNNYGTCNNN		 PBM
Berger et al.(2008)
Pknox2_3077 		0.675 0.519
PKNOX2
M03195_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
PKNOX2_1 		0.675 0.519
Pknox2
M03270_2.00 		Mus musculus
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
Pknox2_1 		0.675 0.519
PKNOX2
M05246_2.00 		Homo sapiens
TGACABVTGTCA
TGACABVTGTCA		 SELEX
Yin et al.(2017)
PKNOX2_eDBD_HT-SELEX 		0.675 0.519
PKNOX2
M05247_2.00 		Homo sapiens
TGACASSTGTCA
TGACASSTGTCA		 SELEX
Yin et al.(2017)
PKNOX2_eDBD_Methyl-HT-SELEX 		0.675 0.519
Tgif1
M00500_2.00 		Mus musculus
NNTGACANNN
NNNTGTCANN		 PBM
Berger et al.(2008)
Tgif1_2342 		0.638 0.519
TGIF1
M03223_2.00 		Homo sapiens
TGACAGCTGTCA
TGACAGCTGTCA		 SELEX
Jolma et al.(2013)
TGIF1_1 		0.638 0.519
TGIF1
M05317_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Yin et al.(2017)
TGIF1_eDBD_HT-SELEX 		0.638 0.519
TGIF1
M09159_2.00 		Homo sapiens
TGACAGS
SCTGTCA		 Misc
Kulakovskiy et al.(2013)
TGIF1_HUMAN.H11MO.0.A 		0.638 0.519
Tgif1
M09211_2.00 		Mus musculus
TGACAGBNV
BNVCTGTCA		 Misc
Kulakovskiy et al.(2013)
TGIF1_MOUSE.H11MO.0.A 		0.638 0.519
TGIF1
M10740_2.00 		Homo sapiens
WHNTGACARST
ASYTGTCANDW		 Transfac
Matys et al.(2006)
V$TGIF_01 		0.638 0.519
TGIF1
M05318_2.00 		Homo sapiens
TGACAKVTGTCA
TGACABMTGTCA		 SELEX
Yin et al.(2017)
TGIF1_eDBD_Methyl-HT-SELEX 		0.638 0.519
achi
M03860_2.00 		Drosophila melanogaster
TGACAD
HTGTCA		 SELEX
Nitta et al.(2015)
achi_1 		0.606 0.463
achi
M03861_2.00 		Drosophila melanogaster
TGACAGMTGTCA
TGACAKCTGTCA		 SELEX
Nitta et al.(2015)
achi_2 		0.606 0.463
achi
M03862_2.00 		Drosophila melanogaster
TGACAGNNNNNNYGTCA
TGACRNNNNNNCTGTCA		 SELEX
Nitta et al.(2015)
achi_3 		0.606 0.463
vis
M03859_2.00 		Drosophila melanogaster
TGACAS
STGTCA		 SELEX
Nitta et al.(2015)
vis_1 		0.606 0.463
vis
M06534_2.00 		Drosophila melanogaster
TGACAB
BTGTCA		 B1H
Mathelier et al.(2014)
MA0252.1 		0.606 0.463
achi
M06535_2.00 		Drosophila melanogaster
TGACAG
CTGTCA		 B1H
Mathelier et al.(2014)
MA0207.1 		0.606 0.463
achi
M06345_2.00 		Drosophila melanogaster
TGTCADW
WHTGACA		 B1H
Zhu et al.(2011)
Achi_Cell_FBgn0033749 		0.606 0.463
achi
M06346_2.00 		Drosophila melanogaster
HTGACA
TGTCAD		 B1H
Zhu et al.(2011)
Achi_SOLEXA_FBgn0033749 		0.606 0.463
vis
M06343_2.00 		Drosophila melanogaster
TGTCA
TGACA		 B1H
Zhu et al.(2011)
Vis_Cell_FBgn0033748 		0.606 0.463
vis
M06344_2.00 		Drosophila melanogaster
TGTCAD
HTGACA		 B1H
Zhu et al.(2011)
Vis_SOLEXA_FBgn0033748 		0.606 0.463
Tgif2
M00521_2.00 		Mus musculus
NNTGACANNN
NNNTGTCANN		 PBM
Berger et al.(2008)
Tgif2_3451 		0.605 0.481
TGIF2
M03123_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
TGIF2_1 		0.605 0.481
TGIF2
M05032_2.00 		Homo sapiens
TGACABVTGTCA
TGACABVTGTCA		 SELEX
Yin et al.(2017)
TGIF2_eDBD_HT-SELEX 		0.605 0.481
TGIF2
M05034_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Yin et al.(2017)
TGIF2_FL_HT-SELEX 		0.605 0.481
TGIF2
M05033_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
TGIF2_eDBD_Methyl-HT-SELEX 		0.605 0.481
TGIF2
M05035_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Yin et al.(2017)
TGIF2_FL_Methyl-HT-SELEX 		0.605 0.481
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KIK48012 Homeodomain 365 421

Links

Other Homeodomain family TFs
Other Suillus luteus TFs

780 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30024.m001746 Ricinus communis 30024.m001746 N 0.000
30131.m007244 Ricinus communis 30131.m007244 N 0.000
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N 0.000
Bo5g078760 Brassica oleracea Bo5g078760 N 0.000
Bostr.26675s0133 Boechera stricta Bostr.26675s0133 N 0.000
Bra014251 Brassica rapa Bra014251 N 0.000
Bra018848 Brassica rapa Bra018848 N 0.000
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N 0.000
Carubv10008999m.g Capsella rubella Carubv10008999m.g N 0.000
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N 0.000
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N 0.000
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.000
cassava20989.m1 Manihot esculenta cassava20989.m1 N 0.000
cassava31043.valid.m1 Manihot esculenta cassava31043.valid.m1 N 0.000
Ca_11133 Cicer arietinum Ca_11133 N 0.000
Ca_27441 Cicer arietinum Ca_27441 N 0.000
chr1.CM0794.360.nd Lotus japonicus chr1.CM0794.360.nd N 0.000
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N 0.000
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.000
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N 0.000
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N 0.000
Cla006433 Citrullus lanatus Cla006433 N 0.000
Cla020893 Citrullus lanatus Cla020893 N 0.000
Cucsa.055340 Cucumis sativus Cucsa.055340 N 0.000
Cucsa.308180 Cucumis sativus Cucsa.308180 N 0.000
Eucgr.B03716 Eucalyptus grandis Eucgr.B03716 N 0.000
Eucgr.G03258 Eucalyptus grandis Eucgr.G03258 N 0.000
evm.TU.supercontig_197.7 Carica papaya evm.TU.supercontig_197.7 N 0.000
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.000
GLYMA01G43620 Glycine max GLYMA01G43620 N 0.000
GLYMA11G01850 Glycine max GLYMA11G01850 N 0.000
GLYMA11G10170 Glycine max GLYMA11G10170 N 0.000
GLYMA12G02490 Glycine max GLYMA12G02490 N 0.000
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N 0.000
Gorai.012G080500 Gossypium raimondii Gorai.012G080500 N 0.000
Gorai.013G015100 Gossypium raimondii Gorai.013G015100 N 0.000
Gorai.013G252600 Gossypium raimondii Gorai.013G252600 N 0.000
Lus10009717.g Linum usitatissimum Lus10009717.g N 0.000
Lus10022418.g Linum usitatissimum Lus10022418.g N 0.000
mgf022906m Mimulus guttatus mgf022906m N 0.000
MTR_4g076140 Medicago truncatula MTR_4g076140 N 0.000
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.000
orange1.1g011736m.g Citrus sinensis orange1.1g011736m.g N 0.000
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N 0.000
PDK_20s1303935g001 Phoenix dactylifera PDK_20s1303935g001 N 0.000
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N 0.000
PGSC0003DMG400022709 Solanum tuberosum PGSC0003DMG400022709 N 0.000
PK02707.1 Cannabis sativa PK02707.1 N 0.000
Pm012190 Prunus mume Pm012190 N 0.000
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N 0.000
POPTR_0003s20100 Populus trichocarpa POPTR_0003s20100 N 0.000
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.000
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N 0.000
SapurV1A.0415s0050 Salix purpurea SapurV1A.0415s0050 N 0.000
SapurV1A.0504s0280 Salix purpurea SapurV1A.0504s0280 N 0.000
SapurV1A.1723s0080 Salix purpurea SapurV1A.1723s0080 N 0.000
SCL3 Arabidopsis thaliana AT1G50420 N 0.000
SCL3 Populus trichocarpa POPTR_0009s05330 N 0.000
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.000
SCL3 Arabidopsis lyrata fgenesh2_kg.1__4122__AT1G50420.1 N 0.000
Solyc01g008910.2 Solanum lycopersicum Solyc01g008910.2 N 0.000
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N 0.000
TCM_040833 Theobroma cacao TCM_040833 N 0.000
TCM_042392 Theobroma cacao TCM_042392 N 0.000
Thhalv10011447m.g Eutrema salsugineum Thhalv10011447m.g N 0.000
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N 0.000