CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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dalao
(
Drosophila melanogaster
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
FBgn0030093
T329514_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0071235
Sox
89
157
PEKPILPYMRYSKRVWDSVKAKHPELKLWELGKKIGAMWKLLPEDEKTEFIDEYEAEKLEYEKSLKAYH
Links
Other
Sox
family TFs
Other
Drosophila melanogaster
TFs
144 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
28428.m000040
Ricinus communis
28428.m000040
I
0.000
29883.m002035
Ricinus communis
29883.m002035
I
0.000
30072.m000955
Ricinus communis
30072.m000955
I
0.000
30174.m008898
Ricinus communis
30174.m008898
I
0.000
AC149818.2_FG009
Zea mays
AC149818.2_FG009
I
0.000
AMTR_s00041p00044170
Amborella trichopoda
AMTR_s00041p00044170
I
0.000
Aquca_009_00560
Aquilegia coerulea
Aquca_009_00560
I
0.000
Aquca_013_00578
Aquilegia coerulea
Aquca_013_00578
I
0.000
Aquca_017_00683
Aquilegia coerulea
Aquca_017_00683
I
0.000
Aquca_017_00693
Aquilegia coerulea
Aquca_017_00693
I
0.000
Aquca_034_00401
Aquilegia coerulea
Aquca_034_00401
I
0.000
BGIOSGA005344
Oryza indica
BGIOSGA005344
I
0.000
BGIOSGA011118
Oryza indica
BGIOSGA011118
I
0.000
BGIOSGA011445
Oryza indica
BGIOSGA011445
I
0.000
BGIOSGA026473
Oryza indica
BGIOSGA026473
I
0.000
Bo3g036000
Brassica oleracea
Bo3g036000
I
0.000
Bo3g036030
Brassica oleracea
Bo3g036030
I
0.000
Bo4g016000
Brassica oleracea
Bo4g016000
I
0.000
Bo4g024620
Brassica oleracea
Bo4g024620
I
0.000
Bo4g108600
Brassica oleracea
Bo4g108600
I
0.000
Bo4g191530
Brassica oleracea
Bo4g191530
I
0.000
Bo4g195520
Brassica oleracea
Bo4g195520
I
0.000
Bo8g092560
Brassica oleracea
Bo8g092560
I
0.000
Bo9g002160
Brassica oleracea
Bo9g002160
I
0.000
Bostr.20903s0070
Boechera stricta
Bostr.20903s0070
I
0.000
Bostr.25993s0233
Boechera stricta
Bostr.25993s0233
I
0.000
Bostr.25993s0538
Boechera stricta
Bostr.25993s0538
I
0.000
Bra000257
Brassica rapa
Bra000257
I
0.000
Bra001087
Brassica rapa
Bra001087
I
0.000
Bra004693
Brassica rapa
Bra004693
I
0.000
Bra004910
Brassica rapa
Bra004910
I
0.000
Bra014581
Brassica rapa
Bra014581
I
0.000
Bra016877
Brassica rapa
Bra016877
I
0.000
Bra037323
Brassica rapa
Bra037323
I
0.000
Bra040311
Brassica rapa
Bra040311
I
0.000
BRADI1G68170
Brachypodium distachyon
BRADI1G68170
I
0.000
BRADI1G75110
Brachypodium distachyon
BRADI1G75110
I
0.000
BRADI3G22510
Brachypodium distachyon
BRADI3G22510
I
0.000
BRADI3G55680
Brachypodium distachyon
BRADI3G55680
I
0.000
Cagra.0686s0035
Capsella grandiflora
Cagra.0686s0035
I
0.000
Cagra.0686s0036
Capsella grandiflora
Cagra.0686s0036
I
0.000
Cagra.0698s0021
Capsella grandiflora
Cagra.0698s0021
I
0.000
Cagra.2636s0029
Capsella grandiflora
Cagra.2636s0029
I
0.000
Carubv10018619m.g
Capsella rubella
Carubv10018619m.g
I
0.000
Carubv10019250m.g
Capsella rubella
Carubv10019250m.g
I
0.000
Carubv10025050m.g
Capsella rubella
Carubv10025050m.g
I
0.000
Carubv10025548m.g
Capsella rubella
Carubv10025548m.g
I
0.000
cassava15337.m1
Manihot esculenta
cassava15337.m1
I
0.000
cassava15612.m1
Manihot esculenta
cassava15612.m1
I
0.000
cassava25975.m1
Manihot esculenta
cassava25975.m1
I
0.000
cassava28659.m1
Manihot esculenta
cassava28659.m1
I
0.000
cassava36912.valid.m1
Manihot esculenta
cassava36912.valid.m1
I
0.000
cassava40664.m1
Manihot esculenta
cassava40664.m1
I
0.000
cassava41632.m1
Manihot esculenta
cassava41632.m1
I
0.000
Ca_07763
Cicer arietinum
Ca_07763
I
0.000
Ca_12213
Cicer arietinum
Ca_12213
I
0.000
chr1.LjT38H23.30.nd
Lotus japonicus
chr1.LjT38H23.30.nd
I
0.000
chr5.CM0494.160.nd
Lotus japonicus
chr5.CM0494.160.nd
I
0.000
Ciclev10021843m.g
Citrus clementina
Ciclev10021843m.g
I
0.000
Ciclev10021992m.g
Citrus clementina
Ciclev10021992m.g
I
0.000
Ciclev10023341m.g
Citrus clementina
Ciclev10023341m.g
I
0.000
Ciclev10024416m.g
Citrus clementina
Ciclev10024416m.g
I
0.000
Cla002965
Citrullus lanatus
Cla002965
I
0.000
Cla006087
Citrullus lanatus
Cla006087
I
0.000
Cla006088
Citrullus lanatus
Cla006088
I
0.000
Cla007068
Citrullus lanatus
Cla007068
I
0.000
Cucsa.053440
Cucumis sativus
Cucsa.053440
I
0.000
Cucsa.053450
Cucumis sativus
Cucsa.053450
I
0.000
Cucsa.362840
Cucumis sativus
Cucsa.362840
I
0.000
Eucgr.B01529
Eucalyptus grandis
Eucgr.B01529
I
0.000
Eucgr.E01414
Eucalyptus grandis
Eucgr.E01414
I
0.000
evm.TU.supercontig_18.118
Carica papaya
evm.TU.supercontig_18.118
I
0.000
evm.TU.supercontig_50.42
Carica papaya
evm.TU.supercontig_50.42
I
0.000
evm.TU.supercontig_50.43
Carica papaya
evm.TU.supercontig_50.43
I
0.000
F775_02052
Aegilops tauschii
F775_02052
I
0.000
gene08250-v1.0-hybrid
Fragaria vesca
gene08250-v1.0-hybrid
I
0.000
gene08253-v1.0-hybrid
Fragaria vesca
gene08253-v1.0-hybrid
I
0.000
GLYMA03G02620
Glycine max
GLYMA03G02620
I
0.000
GLYMA03G31830
Glycine max
GLYMA03G31830
I
0.000
GLYMA03G31860
Glycine max
GLYMA03G31860
I
0.000
GLYMA10G04040
Glycine max
GLYMA10G04040
I
0.000
GLYMA10G04050
Glycine max
GLYMA10G04050
I
0.000
GLYMA13G18191
Glycine max
GLYMA13G18191
I
0.000
GLYMA13G18210
Glycine max
GLYMA13G18210
I
0.000
GLYMA19G34590
Glycine max
GLYMA19G34590
I
0.000
GLYMA19G34600
Glycine max
GLYMA19G34600
I
0.000
Gorai.001G251600
Gossypium raimondii
Gorai.001G251600
I
0.000
Gorai.001G251700
Gossypium raimondii
Gorai.001G251700
I
0.000
Gorai.004G073200
Gossypium raimondii
Gorai.004G073200
I
0.000
Gorai.004G073300
Gossypium raimondii
Gorai.004G073300
I
0.000
Gorai.004G073400
Gossypium raimondii
Gorai.004G073400
I
0.000
Gorai.004G161100
Gossypium raimondii
Gorai.004G161100
I
0.000
Gorai.004G219900
Gossypium raimondii
Gorai.004G219900
I
0.000
Gorai.004G220000
Gossypium raimondii
Gorai.004G220000
I
0.000
Gorai.007G144400
Gossypium raimondii
Gorai.007G144400
I
0.000
Gorai.007G144500
Gossypium raimondii
Gorai.007G144500
I
0.000
Gorai.008G114400
Gossypium raimondii
Gorai.008G114400
I
0.000
GRMZM2G075499
Zea mays
GRMZM2G075499
I
0.000
GRMZM2G076327
Zea mays
GRMZM2G076327
I
0.000
GRMZM2G092483
Zea mays
GRMZM2G092483
I
0.000
GRMZM2G092542
Zea mays
GRMZM2G092542
I
0.000
GRMZM2G110913
Zea mays
GRMZM2G110913
I
0.000
GRMZM2G150594
Zea mays
GRMZM2G150594
I
0.000
GSMUA_Achr10G06700_001
Musa acuminata
GSMUA_Achr10G06700_001
I
0.000
GSMUA_Achr11G02110_001
Musa acuminata
GSMUA_Achr11G02110_001
I
0.000
GSMUA_Achr1G01350_001
Musa acuminata
GSMUA_Achr1G01350_001
I
0.000
GSMUA_Achr1G01360_001
Musa acuminata
GSMUA_Achr1G01360_001
I
0.000
GSMUA_Achr1G02520_001
Musa acuminata
GSMUA_Achr1G02520_001
I
0.000
GSMUA_Achr1G06580_001
Musa acuminata
GSMUA_Achr1G06580_001
I
0.000
GSMUA_Achr2G11240_001
Musa acuminata
GSMUA_Achr2G11240_001
I
0.000
GSMUA_Achr3G27340_001
Musa acuminata
GSMUA_Achr3G27340_001
I
0.000
GSMUA_Achr4G25190_001
Musa acuminata
GSMUA_Achr4G25190_001
I
0.000
GSMUA_Achr5G11330_001
Musa acuminata
GSMUA_Achr5G11330_001
I
0.000
GSMUA_Achr5G13230_001
Musa acuminata
GSMUA_Achr5G13230_001
I
0.000
GSMUA_Achr8G14330_001
Musa acuminata
GSMUA_Achr8G14330_001
I
0.000
GSMUA_AchrUn_randomG07730_001
Musa acuminata
GSMUA_AchrUn_randomG07730_001
I
0.000
GSMUA_AchrUn_randomG10470_001
Musa acuminata
GSMUA_AchrUn_randomG10470_001
I
0.000
GSMUA_AchrUn_randomG23710_001
Musa acuminata
GSMUA_AchrUn_randomG23710_001
I
0.000
gw1.157.74.1
Physcomitrella patens
gw1.157.74.1
I
0.000
gw1.190.59.1
Physcomitrella patens
gw1.190.59.1
I
0.000
gw1.261.12.1
Physcomitrella patens
gw1.261.12.1
I
0.000
gw1.42.84.1
Physcomitrella patens
gw1.42.84.1
I
0.000
gw1.61.81.1
Physcomitrella patens
gw1.61.81.1
I
0.000
LBD16
Arabidopsis thaliana
AT2G42430
D
0.000
LBD16
Arabidopsis lyrata
scaffold_403099.1
I
0.000
LBD16
Vitis vinifera
VIT_07s0005g03030
I
0.000
LBD18
Arabidopsis thaliana
AT2G45420
D
0.000
LBD18
Arabidopsis lyrata
fgenesh2_kg.4__2737__AT2G45420.1
I
0.000
LBD20
Vitis vinifera
VIT_08s0056g01650
I
0.000
LBD29
Arabidopsis thaliana
AT3G58190
I
0.000
LBD29
Arabidopsis lyrata
fgenesh2_kg.5__2263__AT3G58190.1
I
0.000
LBD30
Vitis vinifera
VIT_15s0048g00830
I
0.000
LjSGA_002536.2
Lotus japonicus
LjSGA_002536.2
I
0.000
LjT35F15.70.nd
Lotus japonicus
LjT35F15.70.nd
I
0.000
LjT35F15.90.nd
Lotus japonicus
LjT35F15.90.nd
I
0.000
LPERR02G31040
Leersia perrieri
LPERR02G31040
I
0.000
LPERR03G03460
Leersia perrieri
LPERR03G03460
I
0.000
LPERR03G03470
Leersia perrieri
LPERR03G03470
I
0.000
LPERR03G09330
Leersia perrieri
LPERR03G09330
I
0.000
LPERR08G20530
Leersia perrieri
LPERR08G20530
I
0.000
Lus10000613.g
Linum usitatissimum
Lus10000613.g
I
0.000
Lus10000707.g
Linum usitatissimum
Lus10000707.g
I
0.000
Lus10014757.g
Linum usitatissimum
Lus10014757.g
I
0.000
Lus10024877.g
Linum usitatissimum
Lus10024877.g
I
0.000
Lus10033872.g
Linum usitatissimum
Lus10033872.g
I
0.000
Lus10033873.g
Linum usitatissimum
Lus10033873.g
I
0.000
MDP0000131964
Malus domestica
MDP0000131964
I
0.000
MDP0000145761
Malus domestica
MDP0000145761
I
0.000
MDP0000254224
Malus domestica
MDP0000254224
I
0.000
mgf020773m
Mimulus guttatus
mgf020773m
I
0.000
mgf026090m
Mimulus guttatus
mgf026090m
I
0.000
MLOC_10784
Hordeum vulgare
MLOC_10784
I
0.000
MLOC_52276
Hordeum vulgare
MLOC_52276
I
0.000
MLOC_55239
Hordeum vulgare
MLOC_55239
I
0.000
MLOC_61947
Hordeum vulgare
MLOC_61947
I
0.000
MTR_1g070205
Medicago truncatula
MTR_1g070205
I
0.000
MTR_1g070220
Medicago truncatula
MTR_1g070220
I
0.000
MTR_7g096530
Medicago truncatula
MTR_7g096530
I
0.000
MTR_7g096610
Medicago truncatula
MTR_7g096610
I
0.000
OB02G44330
Oryza brachyantha
OB02G44330
I
0.000
OB03G13880
Oryza brachyantha
OB03G13880
I
0.000
OB03G13890
Oryza brachyantha
OB03G13890
I
0.000
OB08G30680
Oryza brachyantha
OB08G30680
I
0.000
OBART02G37570
Oryza barthii
OBART02G37570
I
0.000
OBART03G03820
Oryza barthii
OBART03G03820
I
0.000
OBART03G03830
Oryza barthii
OBART03G03830
I
0.000
OBART03G10450
Oryza barthii
OBART03G10450
I
0.000
OBART08G23860
Oryza barthii
OBART08G23860
I
0.000
OGLUM02G38740
Oryza glumaepatula
OGLUM02G38740
I
0.000
OGLUM03G03700
Oryza glumaepatula
OGLUM03G03700
I
0.000
OGLUM03G10340
Oryza glumaepatula
OGLUM03G10340
I
0.000
OGLUM08G25340
Oryza glumaepatula
OGLUM08G25340
I
0.000
OLONG_001985
Oryza longistaminata
OLONG_001985
I
0.000
OLONG_010223
Oryza longistaminata
OLONG_010223
I
0.000
OMERI02G35350
Oryza meridionalis
OMERI02G35350
I
0.000
OMERI03G09680
Oryza meridionalis
OMERI03G09680
I
0.000
OMERI07G01660
Oryza meridionalis
OMERI07G01660
I
0.000
OMERI08G18670
Oryza meridionalis
OMERI08G18670
I
0.000
ONIVA02G40360
Oryza nivara
ONIVA02G40360
I
0.000
ONIVA03G03570
Oryza nivara
ONIVA03G03570
I
0.000
ONIVA03G03580
Oryza nivara
ONIVA03G03580
I
0.000
ONIVA09G01330
Oryza nivara
ONIVA09G01330
I
0.000
OPUNC02G34750
Oryza punctata
OPUNC02G34750
I
0.000
OPUNC03G03520
Oryza punctata
OPUNC03G03520
I
0.000
OPUNC03G10080
Oryza punctata
OPUNC03G10080
I
0.000
OPUNC08G21770
Oryza punctata
OPUNC08G21770
I
0.000
orange1.1g027399m.g
Citrus sinensis
orange1.1g027399m.g
I
0.000
orange1.1g036534m.g
Citrus sinensis
orange1.1g036534m.g
I
0.000
orange1.1g040761m.g
Citrus sinensis
orange1.1g040761m.g
I
0.000
orange1.1g042813m.g
Citrus sinensis
orange1.1g042813m.g
I
0.000
ORGLA02G0327800
Oryza glaberrima
ORGLA02G0327800
I
0.000
ORGLA03G0035900
Oryza glaberrima
ORGLA03G0035900
I
0.000
ORGLA03G0100400
Oryza glaberrima
ORGLA03G0100400
I
0.000
ORGLA08G0192400
Oryza glaberrima
ORGLA08G0192400
I
0.000
ORUFI02G39110
Oryza rufipogon
ORUFI02G39110
I
0.000
ORUFI03G03540
Oryza rufipogon
ORUFI03G03540
I
0.000
ORUFI03G03550
Oryza rufipogon
ORUFI03G03550
I
0.000
ORUFI03G10670
Oryza rufipogon
ORUFI03G10670
I
0.000
ORUFI08G26340
Oryza rufipogon
ORUFI08G26340
I
0.000
OS02G0820500
Oryza sativa
OS02G0820500
I
0.000
OS03G0149100
Oryza sativa
OS03G0149100
I
0.000
OS03G0246900
Oryza sativa
OS03G0246900
I
0.000
OS08G0563400
Oryza sativa
OS08G0563400
I
0.000
Pavir.Aa00097
Panicum virgatum
Pavir.Aa00097
I
0.000
Pavir.Ia04220
Panicum virgatum
Pavir.Ia04220
I
0.000
Pavir.Ib00282
Panicum virgatum
Pavir.Ib00282
I
0.000
Pavir.Ib00283
Panicum virgatum
Pavir.Ib00283
I
0.000
Pavir.J03376
Panicum virgatum
Pavir.J03376
I
0.000
Pavir.J24246
Panicum virgatum
Pavir.J24246
I
0.000
Pavir.J34872
Panicum virgatum
Pavir.J34872
I
0.000
Pavir.J39638
Panicum virgatum
Pavir.J39638
I
0.000
PDK_20s1428661g002
Phoenix dactylifera
PDK_20s1428661g002
I
0.000
PGSC0003DMG400009713
Solanum tuberosum
PGSC0003DMG400009713
I
0.000
PGSC0003DMG400009716
Solanum tuberosum
PGSC0003DMG400009716
I
0.000
PGSC0003DMG400020069
Solanum tuberosum
PGSC0003DMG400020069
I
0.000
PGSC0003DMG400022454
Solanum tuberosum
PGSC0003DMG400022454
I
0.000
PGSC0003DMG402012772
Solanum tuberosum
PGSC0003DMG402012772
I
0.000
PK23380.1
Cannabis sativa
PK23380.1
I
0.000
Pm017935
Prunus mume
Pm017935
I
0.000
Pm017936
Prunus mume
Pm017936
I
0.000
Pm020627
Prunus mume
Pm020627
I
0.000
Pm020628
Prunus mume
Pm020628
I
0.000
Pm020629
Prunus mume
Pm020629
I
0.000
POPTR_0002s04200
Populus trichocarpa
POPTR_0002s04200
I
0.000
POPTR_0002s04210
Populus trichocarpa
POPTR_0002s04210
I
0.000
POPTR_0005s24320
Populus trichocarpa
POPTR_0005s24320
I
0.000
POPTR_0047s00280
Populus trichocarpa
POPTR_0047s00280
I
0.000
PRUPE_ppa010383mg
Prunus persica
PRUPE_ppa010383mg
I
0.000
PRUPE_ppa019939mg
Prunus persica
PRUPE_ppa019939mg
I
0.000
PRUPE_ppa025349mg
Prunus persica
PRUPE_ppa025349mg
I
0.000
PRUPE_ppa025889mg
Prunus persica
PRUPE_ppa025889mg
I
0.000
SapurV1A.0006s0970
Salix purpurea
SapurV1A.0006s0970
I
0.000
SapurV1A.0006s0980
Salix purpurea
SapurV1A.0006s0980
I
0.000
SapurV1A.0024s0780
Salix purpurea
SapurV1A.0024s0780
I
0.000
SapurV1A.0378s0180
Salix purpurea
SapurV1A.0378s0180
I
0.000
SapurV1A.0532s0190
Salix purpurea
SapurV1A.0532s0190
I
0.000
SapurV1A.1704s0040
Salix purpurea
SapurV1A.1704s0040
I
0.000
Sb01g041130
Sorghum bicolor
Sb01g041130
I
0.000
Sb01g046990
Sorghum bicolor
Sb01g046990
I
0.000
Sb01g047000
Sorghum bicolor
Sb01g047000
I
0.000
Sb04g037550
Sorghum bicolor
Sb04g037550
I
0.000
Sb07g023810
Sorghum bicolor
Sb07g023810
I
0.000
SELMODRAFT_49270
Selaginella moellendorffii
SELMODRAFT_49270
I
0.000
SELMODRAFT_59642
Selaginella moellendorffii
SELMODRAFT_59642
I
0.000
Si015156m.g
Setaria italica
Si015156m.g
I
0.000
Si019578m.g
Setaria italica
Si019578m.g
I
0.000
Si037727m.g
Setaria italica
Si037727m.g
I
0.000
Si040019m.g
Setaria italica
Si040019m.g
I
0.000
Solyc01g091420.1
Solanum lycopersicum
Solyc01g091420.1
I
0.000
Solyc06g083930.1
Solanum lycopersicum
Solyc06g083930.1
I
0.000
Solyc09g066260.2
Solanum lycopersicum
Solyc09g066260.2
I
0.000
Solyc09g066270.2
Solanum lycopersicum
Solyc09g066270.2
I
0.000
TCM_004103
Theobroma cacao
TCM_004103
I
0.000
TCM_004106
Theobroma cacao
TCM_004106
I
0.000
TCM_005496
Theobroma cacao
TCM_005496
I
0.000
Thhalv10001791m.g
Eutrema salsugineum
Thhalv10001791m.g
I
0.000
Thhalv10006226m.g
Eutrema salsugineum
Thhalv10006226m.g
I
0.000
Thhalv10006423m.g
Eutrema salsugineum
Thhalv10006423m.g
I
0.000
Thhalv10017158m.g
Eutrema salsugineum
Thhalv10017158m.g
I
0.000
Traes_4AL_CAF4E16B5
Triticum aestivum
Traes_4AL_CAF4E16B5
I
0.000
Traes_4AS_5971FF832
Triticum aestivum
Traes_4AS_5971FF832
I
0.000
Traes_4BL_3FB579782
Triticum aestivum
Traes_4BL_3FB579782
I
0.000
Traes_4BL_A4D0F4AD6
Triticum aestivum
Traes_4BL_A4D0F4AD6
I
0.000
Traes_4BS_5D9291539
Triticum aestivum
Traes_4BS_5D9291539
I
0.000
Traes_4DL_43D63ABE3
Triticum aestivum
Traes_4DL_43D63ABE3
I
0.000
Traes_4DL_A2012EA68
Triticum aestivum
Traes_4DL_A2012EA68
I
0.000
Traes_6AL_D6045E37C
Triticum aestivum
Traes_6AL_D6045E37C
I
0.000
Traes_6DL_850266B2A
Triticum aestivum
Traes_6DL_850266B2A
I
0.000
TRIUR3_01477
Triticum urartu
TRIUR3_01477
I
0.000
VIT_07s0005g03020
Vitis vinifera
VIT_07s0005g03020
I
0.000