Eucgr.F01607 (Eucalyptus grandis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Eucgr.F01607 T008160_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.726 0.878
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.726 0.878
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.726 0.878
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.F01607.1 AP2 36 87

Links

Other AP2 family TFs
Other Eucalyptus grandis TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_01779 Aegilops tauschii F775_01779 I 0.695
F775_02345 Aegilops tauschii F775_02345 I 0.710
F775_32062 Aegilops tauschii F775_32062 I 0.682
Aquca_013_00679 Aquilegia coerulea Aquca_013_00679 I 0.710
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.709
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.726
DREB2D Arabidopsis thaliana AT1G75490 D 0.726
Bostr.23794s0027 Boechera stricta Bostr.23794s0027 I 0.687
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.726
BRADI3G12680 Brachypodium distachyon BRADI3G12680 I 0.700
Bo2g083920 Brassica oleracea Bo2g083920 I 0.727
Bo6g086320 Brassica oleracea Bo6g086320 I 0.713
Bo6g119660 Brassica oleracea Bo6g119660 I 0.726
Bra003752 Brassica rapa Bra003752 I 0.713
Bra008200 Brassica rapa Bra008200 I 0.727
Bra015840 Brassica rapa Bra015840 I 0.726
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.726
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.726
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.749
Ca_10770 Cicer arietinum Ca_10770 I 0.737
Cla021113 Citrullus lanatus Cla021113 I 0.751
Cla022803 Citrullus lanatus Cla022803 I 0.774
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.749
Ciclev10022244m.g Citrus clementina Ciclev10022244m.g I 0.726
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.749
Cucsa.231820 Cucumis sativus Cucsa.231820 I 0.774
Cucsa.342750 Cucumis sativus Cucsa.342750 I 0.750
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.681
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.726
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I 0.732
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.693
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.694
GLYMA04G03070 Glycine max GLYMA04G03070 I 0.737
GLYMA06G03110 Glycine max GLYMA06G03110 I 0.737
GLYMA14G07620 Glycine max GLYMA14G07620 I 0.733
GLYMA17G37350 Glycine max GLYMA17G37350 I 0.733
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I 0.750
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.695
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I 0.750
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.713
MLOC_12223 Hordeum vulgare MLOC_12223 I 0.707
MLOC_66580 Hordeum vulgare MLOC_66580 I 0.710
LPERR08G12790 Leersia perrieri LPERR08G12790 I 0.710
LPERR08G20650 Leersia perrieri LPERR08G20650 I 0.698
Lus10006127.g Linum usitatissimum Lus10006127.g I 0.793
Lus10010632.g Linum usitatissimum Lus10010632.g I 0.794
Lus10024298.g Linum usitatissimum Lus10024298.g I 0.793
chr1.CM0195.510.nd Lotus japonicus chr1.CM0195.510.nd I 0.781
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I 0.737
MDP0000141335 Malus domestica MDP0000141335 I 0.723
MDP0000147009 Malus domestica MDP0000147009 I 0.694
MDP0000165880 Malus domestica MDP0000165880 I 0.691
MDP0000250924 Malus domestica MDP0000250924 I 0.738
MDP0000250927 Malus domestica MDP0000250927 I 0.706
MDP0000295902 Malus domestica MDP0000295902 I 0.723
MDP0000446783 Malus domestica MDP0000446783 I 0.694
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.749
cassava45031.m1 Manihot esculenta cassava45031.m1 I 0.753
MTR_1g023170 Medicago truncatula MTR_1g023170 I 0.737
MTR_3g112440 Medicago truncatula MTR_3g112440 I 0.679
mgf024545m Mimulus guttatus mgf024545m I 0.747
OB08G30790 Oryza brachyantha OB08G30790 I 0.713
ORGLA08G0193700 Oryza glaberrima ORGLA08G0193700 I 0.713
OGLUM08G25470 Oryza glumaepatula OGLUM08G25470 I 0.713
BGIOSGA026461 Oryza indica BGIOSGA026461 I 0.713
BGIOSGA026464 Oryza indica BGIOSGA026464 I 0.713
OMERI08G18820 Oryza meridionalis OMERI08G18820 I 0.713
ONIVA09G01190 Oryza nivara ONIVA09G01190 I 0.713
OPUNC08G21890 Oryza punctata OPUNC08G21890 I 0.713
ORUFI08G26490 Oryza rufipogon ORUFI08G26490 I 0.713
DREB2C Oryza sativa OS08G0565200 I 0.713
Pavir.J22169 Panicum virgatum Pavir.J22169 I 0.710
Pavir.J25464 Panicum virgatum Pavir.J25464 I 0.710
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.683
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.747
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I 0.748
Pm003634 Prunus mume Pm003634 I 0.696
Pm006274 Prunus mume Pm006274 I 0.750
Pm018989 Prunus mume Pm018989 I 0.692
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.692
PRUPE_ppa022996mg Prunus persica PRUPE_ppa022996mg I 0.684
PRUPE_ppa023248mg Prunus persica PRUPE_ppa023248mg I 0.746
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.704
30170.m014115 Ricinus communis 30170.m014115 I 0.749
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I 0.758
SELMODRAFT_38498 Selaginella moellendorffii SELMODRAFT_38498 N 0.682
SELMODRAFT_38500 Selaginella moellendorffii SELMODRAFT_38500 N 0.682
Si024059m.g Setaria italica Si024059m.g I 0.710
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.678
Solyc04g080910.1 Solanum lycopersicum Solyc04g080910.1 I 0.743
PGSC0003DMG400003706 Solanum tuberosum PGSC0003DMG400003706 I 0.743
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.678
TCM_026121 Theobroma cacao TCM_026121 I 0.721
TCM_034132 Theobroma cacao TCM_034132 I 0.755
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I 0.682
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I 0.682
Traes_2AL_3FB37A3E7 Triticum aestivum Traes_2AL_3FB37A3E7 I 0.690
Traes_2BL_B397F2CE3 Triticum aestivum Traes_2BL_B397F2CE3 I 0.703
Traes_2DL_B32203C91 Triticum aestivum Traes_2DL_B32203C91 I 0.710
TRIUR3_03342 Triticum urartu TRIUR3_03342 N 0.682
TRIUR3_17409 Triticum urartu TRIUR3_17409 I 0.682
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I 0.739