Hsal_12028--XP_001122464.1_APIME (Harpegnathos saltator)
DM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00751 (DM) IPR001275 Hsal_12028--XP_001122464.1_APIME T169479_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DMRT2
M01931_2.00 		Homo sapiens
NAATKTATHN
NDATAMATTN		 PBM
Weirauch et al.(2014)
pTH9189 		0.915 0.809
DMRT2
M10434_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT2_01 		0.915 0.809
DMRTA2
M01930_2.00 		Homo sapiens
NNHDTDDNNN
NNNHHAHDNN		 PBM
Weirauch et al.(2014)
pTH9198 		0.901 0.766
dmrta2
M01937_2.00 		Xenopus tropicalis
NNWDWDDN
NHHWHWNN		 PBM
Weirauch et al.(2014)
pTH9300 		0.901 0.766
DMRTA2
M04692_2.00 		Homo sapiens
VHTGTWDCVDHN
NDHBGHWACADB		 SELEX
Yin et al.(2017)
DMRTA2_eDBD_HT-SELEX 		0.901 0.766
DMRTA2
M10433_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT5_01 		0.901 0.766
DMRTA2
M04693_2.00 		Homo sapiens
HHTGTWDCVNHN
NDNBGHWACADD		 SELEX
Yin et al.(2017)
DMRTA2_eDBD_Methyl-HT-SELEX 		0.901 0.766
dmrt99B
M01935_2.00 		Drosophila melanogaster
WRTWDCNDNN
NNHNGHWAYW		 PBM
Weirauch et al.(2014)
pTH9261 		0.901 0.745
dmrt99B
M01211_2.00 		Drosophila melanogaster
NNHDTDDNNN
NNNHHAHDNN		 PBM
Lambert et al.(2019)
pTH9799 		0.901 0.745
dmrt99B
M03720_2.00 		Drosophila melanogaster
HNGHWACAATGTWDCND
HNGHWACATTGTWDCND		 SELEX
Nitta et al.(2015)
dmrt99B_1 		0.901 0.745
DMRT3
M01927_2.00 		Homo sapiens
NWTGTAWCMNN
NNKGWTACAWN		 PBM
Weirauch et al.(2014)
pTH9188 		0.891 0.745
DMRT3
M04681_2.00 		Homo sapiens
AWTGTAWCAAWWH
DWWTTGWTACAWT		 SELEX
Yin et al.(2017)
DMRT3_eDBD_HT-SELEX 		0.891 0.745
DMRT3
M10430_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT3_01 		0.891 0.745
DMRT3
M04682_2.00 		Homo sapiens
AATGTAWCRAWWY
RWWTYGWTACATT		 SELEX
Yin et al.(2017)
DMRT3_eDBD_Methyl-HT-SELEX 		0.891 0.745
dmd-5
M00659_2.00 		Caenorhabditis elegans
WNWRTWDHNN
NNDHWAYWNW		 PBM
Narasimhan et al.(2015)
pTH10777 		0.886 0.745
Dmrt1
M09027_2.00 		Mus musculus
HDGHWACAAWGTWDCHN
NDGHWACWTTGTWDCHD		 Misc
Kulakovskiy et al.(2013)
DMRT1_MOUSE.H11MO.0.C 		0.876 0.723
dmd-4
M00656_2.00 		Caenorhabditis elegans
NWGTAWCNNN
NNNGWTACWN		 PBM
Narasimhan et al.(2015)
pTH10640 		0.875 0.702
dmrt93B
M03718_2.00 		Drosophila melanogaster
NDTGTATCRWW
WWYGATACAHN		 SELEX
Nitta et al.(2015)
dmrt93B_1 		0.875 0.660
dmrt93B
M03719_2.00 		Drosophila melanogaster
NNHGTAWCNNN
NNNGWTACDNN		 SELEX
Nitta et al.(2015)
dmrt93B_2 		0.875 0.660
DMRT1
M01928_2.00 		Homo sapiens
NDWGTWDCNN
NNGHWACWHN		 PBM
Weirauch et al.(2014)
pTH9197 		0.874 0.723
DMRT1
M01929_2.00 		Homo sapiens
TGTATCAA
TTGATACA		 PBM
Weirauch et al.(2014)
pTH9446 		0.874 0.723
DMRT1
M04683_2.00 		Homo sapiens
NWTGTWDCVWHN
NDWBGHWACAWN		 SELEX
Yin et al.(2017)
DMRT1_FL_HT-SELEX 		0.874 0.723
DMRT1
M10431_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT1_01 		0.874 0.723
DMRT1
M04684_2.00 		Homo sapiens
NDYGTWDCVNNN
NNNBGHWACRHN		 SELEX
Yin et al.(2017)
DMRT1_FL_Methyl-HT-SELEX 		0.874 0.723
For this family, TFs with SR scores > 0.845 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Hsal_12028--XP_001122464.1_APIME DM 20 66

Links

Other DM family TFs
Other Harpegnathos saltator TFs

516 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00017p00206510 Amborella trichopoda AMTR_s00017p00206510 N
BRADI1G02640 Brachypodium distachyon BRADI1G02640 N
BRADI1G02650 Brachypodium distachyon BRADI1G02650 N
BRADI2G07090 Brachypodium distachyon BRADI2G07090 N
BRADI3G01960 Brachypodium distachyon BRADI3G01960 N
Bo7g049880 Brassica oleracea Bo7g049880 I
PK01533.1 Cannabis sativa PK01533.1 N
PK03316.1 Cannabis sativa PK03316.1 N
evm.TU.supercontig_37.170 Carica papaya evm.TU.supercontig_37.170 N
CHLREDRAFT_126810 Chlamydomonas reinhardtii CHLREDRAFT_126810 N
IGS.gm_9_00317 Chlorella NC64A IGS.gm_9_00317 N
e_gw1.1.536.1 Chlorella vulgaris e_gw1.1.536.1 N
estExt_fgeneshCV_pm.C_10002 Chlorella vulgaris estExt_fgeneshCV_pm.C_10002 N
Ca_11038 Cicer arietinum Ca_11038 N
Cla016088 Citrullus lanatus Cla016088 N
Ciclev10002696m.g Citrus clementina Ciclev10002696m.g N
orange1.1g030905m.g Citrus sinensis orange1.1g030905m.g N
fgenesh1_pg.1_#_433 Coccomyxa subellipsoidea C169 fgenesh1_pg.1_#_433 N
estExt_fgenesh1_pg.C_10541 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pg.C_10541 N
Cucsa.381750 Cucumis sativus Cucsa.381750 N
ETH_00029175 Eimeria tenella ETH_00029175 N
gene07618-v1.0-hybrid Fragaria vesca gene07618-v1.0-hybrid N
gene14603-v1.0-hybrid Fragaria vesca gene14603-v1.0-hybrid N
GLYMA11G11290 Glycine max GLYMA11G11290 N
GLYMA12G03470 Glycine max GLYMA12G03470 N
Gorai.008G062500 Gossypium raimondii Gorai.008G062500 N
Gorai.005G253200 Gossypium raimondii Gorai.005G253200 I
Gorai.002G195100 Gossypium raimondii Gorai.002G195100 I
Gorai.002G195000 Gossypium raimondii Gorai.002G195000 I
LPERR08G02000 Leersia perrieri LPERR08G02000 N
LPERR02G01370 Leersia perrieri LPERR02G01370 N
Lus10027839.g Linum usitatissimum Lus10027839.g N
Lus10025058.g Linum usitatissimum Lus10025058.g N
Lus10005066.g Linum usitatissimum Lus10005066.g N
chr3.CM0112.180.nd Lotus japonicus chr3.CM0112.180.nd N
chr6.CM0045.280.nd Lotus japonicus chr6.CM0045.280.nd N
MDP0000225222 Malus domestica MDP0000225222 N
MDP0000121628 Malus domestica MDP0000121628 N
MDP0000155077 Malus domestica MDP0000155077 N
MDP0000202739 Malus domestica MDP0000202739 N
cassava29163.valid.m1 Manihot esculenta cassava29163.valid.m1 N
cassava12557.valid.m1 Manihot esculenta cassava12557.valid.m1 N
mgf015980m Mimulus guttatus mgf015980m I
mgf014458m Mimulus guttatus mgf014458m N
mgf001526m Mimulus guttatus mgf001526m N
OBART02G01600 Oryza barthii OBART02G01600 N
OB02G23180 Oryza brachyantha OB02G23180 I
ORGLA08G0012100 Oryza glaberrima ORGLA08G0012100 N
ORGLA02G0014700 Oryza glaberrima ORGLA02G0014700 N
OGLUM08G01920 Oryza glumaepatula OGLUM08G01920 N
OGLUM02G01470 Oryza glumaepatula OGLUM02G01470 N
BGIOSGA007226 Oryza indica BGIOSGA007226 N
BGIOSGA027713 Oryza indica BGIOSGA027713 N
OMERI02G00930 Oryza meridionalis OMERI02G00930 N
OMERI08G01940 Oryza meridionalis OMERI08G01940 N
ONIVA02G01490 Oryza nivara ONIVA02G01490 N
ONIVA08G01720 Oryza nivara ONIVA08G01720 N
OPUNC02G01060 Oryza punctata OPUNC02G01060 N
ORUFI02G01580 Oryza rufipogon ORUFI02G01580 N
ORUFI08G02050 Oryza rufipogon ORUFI08G02050 N
OS02G0121100 Oryza sativa OS02G0121100 N
OS08G0129200 Oryza sativa OS08G0129200 N
Pavir.J33349 Panicum virgatum Pavir.J33349 N
Pavir.Ab00211 Panicum virgatum Pavir.Ab00211 N
Phatr3_J12737 Phaeodactylum tricornutum Phatr3_J12737 N
POPTR_0004s17840 Populus trichocarpa POPTR_0004s17840 N
POPTR_0009s13460 Populus trichocarpa POPTR_0009s13460 N
Pm020837 Prunus mume Pm020837 I
Pm026767 Prunus mume Pm026767 N
PRUPE_ppa010531mg Prunus persica PRUPE_ppa010531mg N
SapurV1A.0514s0160 Salix purpurea SapurV1A.0514s0160 N
SapurV1A.0117s0150 Salix purpurea SapurV1A.0117s0150 N
SELMODRAFT_123455 Selaginella moellendorffii SELMODRAFT_123455 N
SELMODRAFT_154869 Selaginella moellendorffii SELMODRAFT_154869 N
Solyc01g111300.2 Solanum lycopersicum Solyc01g111300.2 N
Solyc10g055250.1 Solanum lycopersicum Solyc10g055250.1 I
PGSC0003DMG400023206 Solanum tuberosum PGSC0003DMG400023206 I
PGSC0003DMG400001590 Solanum tuberosum PGSC0003DMG400001590 N
Sb04g001720 Sorghum bicolor Sb04g001720 N
Sb06g029650 Sorghum bicolor Sb06g029650 N
TCM_000198 Theobroma cacao TCM_000198 N
Traes_6AS_539B381F1 Triticum aestivum Traes_6AS_539B381F1 N
TRIUR3_31144 Triticum urartu TRIUR3_31144 N
VIT_03s0038g02130 Vitis vinifera VIT_03s0038g02130 I
VIT_04s0023g03520 Vitis vinifera VIT_04s0023g03520 N
estExt_Genewise1Plus.C_10818 Volvox carteri estExt_Genewise1Plus.C_10818 N
GRMZM5G895313 Zea mays GRMZM5G895313 N
GRMZM2G389768 Zea mays GRMZM2G389768 N