Ciclev10014845m.g (Citrus clementina)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Ciclev10014845m.g T202393_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10014845m GRAS 166 536

Links

Other GRAS family TFs
Other Citrus clementina TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.791
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.753
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.713
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.772
PAT1 Arabidopsis thaliana AT5G48150 N 0.786
SCL5 Arabidopsis thaliana AT1G50600 N 0.710
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.775
Bo2g149670 Brassica oleracea Bo2g149670 N 0.775
Bo7g089080 Brassica oleracea Bo7g089080 N 0.751
Bo9g009240 Brassica oleracea Bo9g009240 N 0.000
Bo9g009260 Brassica oleracea Bo9g009260 N 0.772
Bra020715 Brassica rapa Bra020715 N 0.775
Bra026077 Brassica rapa Bra026077 N 0.000
Bra036185 Brassica rapa Bra036185 N 0.770
PK15082.1 Cannabis sativa PK15082.1 N 0.715
PK09018.1 Cannabis sativa PK09018.1 N 0.808
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.789
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.789
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.732
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.851
Ca_09786 Cicer arietinum Ca_09786 N 0.829
Cla004565 Citrullus lanatus Cla004565 N 0.702
Cla001429 Citrullus lanatus Cla001429 N 0.824
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.743
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.989
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.813
Cucsa.042310 Cucumis sativus Cucsa.042310 N 0.000
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N 0.721
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.824
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.762
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.859
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.764
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.854
GLYMA09G22110 Glycine max GLYMA09G22110 N 0.000
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.854
GLYMA02G46730 Glycine max GLYMA02G46730 N 0.000
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.859
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.740
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.862
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.770
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.810
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.740
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.775
Lus10003772.g Linum usitatissimum Lus10003772.g N 0.000
LjSGA_018703.2 Lotus japonicus LjSGA_018703.2 N 0.000
MDP0000152670 Malus domestica MDP0000152670 N 0.851
MDP0000804652 Malus domestica MDP0000804652 N 0.846
MDP0000284679 Malus domestica MDP0000284679 N 0.753
MDP0000205236 Malus domestica MDP0000205236 N 0.753
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.759
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.786
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.791
cassava8885.m1 Manihot esculenta cassava8885.m1 N 0.753
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.837
OMERI10G05450 Oryza meridionalis OMERI10G05450 N 0.710
CIGR2 Oryza sativa OS07G0583600 N 0.000
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.751
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.759
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.862
Pm015021 Prunus mume Pm015021 N 0.851
Pm012019 Prunus mume Pm012019 N 0.764
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.745
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.856
29949.m000124 Ricinus communis 29949.m000124 N 0.764
27613.m000642 Ricinus communis 27613.m000642 N 0.783
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.770
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.865
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.827
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N 0.740
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.829
TCM_002319 Theobroma cacao TCM_002319 N 0.867
TCM_030733 Theobroma cacao TCM_030733 N 0.767
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.846
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.767