GRMZM2G042756 (Zea mays)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GRMZM2G042756 T002106_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1E
M09709_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1E_01 		0.826 0.960
DREB1G
M01635_2.00 		Oryza sativa
NYGCCGACAN
NTGTCGGCRN		 PBM
Weirauch et al.(2014)
pTH8352 		0.797 0.940
DREB1G
M09707_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1G_01 		0.797 0.940
DREB1C
M01623_2.00 		Arabidopsis thaliana
RCCGACAT
ATGTCGGY		 PBM
Weirauch et al.(2014)
pTH8187 		0.690 0.760
DREB1C
M06639_2.00 		Arabidopsis thaliana
NNNHBRCCGACATNN
NNATGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF2_col_a 		0.690 0.760
DREB1C
M06640_2.00 		Arabidopsis thaliana
NYBRCCGACATVN
NBATGTCGGYVRN		 Dap-seq
OMalley et al.(2016)
CBF2_colamp_a 		0.690 0.760
DREB1A
M01624_2.00 		Arabidopsis thaliana
NRCCGACNNN
NNNGTCGGYN		 PBM
Weirauch et al.(2014)
pTH8163 		0.689 0.800
DREB1A
M01625_2.00 		Arabidopsis thaliana
NNRCCGACNW
WNGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH9718 		0.689 0.800
DREB1A
M06641_2.00 		Arabidopsis thaliana
HNYBRCCGACDWNN
NNWHGTCGGYVRND		 Dap-seq
OMalley et al.(2016)
CBF3_col_a 		0.689 0.800
DREB1A
M06642_2.00 		Arabidopsis thaliana
YBRCCGACATN
NATGTCGGYVR		 Dap-seq
OMalley et al.(2016)
CBF3_colamp_a 		0.689 0.800
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.689 0.800
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.689 0.800
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G042756_P01 AP2 48 99

Links

Other AP2 family TFs
Other Zea mays TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb06g025900 Sorghum bicolor Sb06g025900 I 0.850
Si011005m.g Setaria italica Si011005m.g I 0.850
Pavir.Ga00931 Panicum virgatum Pavir.Ga00931 I 0.840
DREB1E Oryza indica BGIOSGA016950 I 0.826
LPERR04G18190 Leersia perrieri LPERR04G18190 I 0.826
OBART04G22220 Oryza barthii OBART04G22220 I 0.826
OGLUM04G22260 Oryza glumaepatula OGLUM04G22260 I 0.826
OMERI04G18770 Oryza meridionalis OMERI04G18770 I 0.826
ONIVA04G20840 Oryza nivara ONIVA04G20840 I 0.826
OPUNC04G19970 Oryza punctata OPUNC04G19970 I 0.826
ORGLA04G0192900 Oryza glaberrima ORGLA04G0192900 I 0.826
ORUFI04G23890 Oryza rufipogon ORUFI04G23890 I 0.826
DREB1E Oryza sativa OS04G0572400 D 0.826
DREB1G Oryza indica BGIOSGA008804 I 0.797
GRMZM2G137341 Zea mays GRMZM2G137341 I 0.797
LPERR02G22610 Leersia perrieri LPERR02G22610 I 0.797
OBART02G27760 Oryza barthii OBART02G27760 I 0.797
OGLUM02G28340 Oryza glumaepatula OGLUM02G28340 I 0.797
OMERI02G26980 Oryza meridionalis OMERI02G26980 I 0.797
ONIVA02G30790 Oryza nivara ONIVA02G30790 I 0.797
OPUNC02G25480 Oryza punctata OPUNC02G25480 I 0.797
ORUFI02G29230 Oryza rufipogon ORUFI02G29230 I 0.797
DREB1G Oryza sativa OS02G0677300 D 0.797
Sb04g031950 Sorghum bicolor Sb04g031950 I 0.797
Pavir.Aa00912 Panicum virgatum Pavir.Aa00912 I 0.797
Pavir.Ab02685 Panicum virgatum Pavir.Ab02685 I 0.797
Si018262m.g Setaria italica Si018262m.g I 0.787
BRADI3G51630 Brachypodium distachyon BRADI3G51630 I 0.782
MLOC_75886 Hordeum vulgare MLOC_75886 I 0.782
Aquca_012_00144 Aquilegia coerulea Aquca_012_00144 I 0.727
Aquca_013_00435 Aquilegia coerulea Aquca_013_00435 I 0.720
Aquca_013_00436 Aquilegia coerulea Aquca_013_00436 I 0.718
Aquca_013_00434 Aquilegia coerulea Aquca_013_00434 I 0.700
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.692
DREB1C Arabidopsis thaliana AT4G25470 D 0.690
DREB1A Arabidopsis thaliana AT4G25480 D 0.689
DREB1D Arabidopsis thaliana AT5G51990 D 0.689
Bo9g104770 Brassica oleracea Bo9g104770 I 0.689
Bra028290 Brassica rapa Bra028290 I 0.689
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.689
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.689
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.689
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.689
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.689
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.685
30147.m014313 Ricinus communis 30147.m014313 I 0.685
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.685
Bostr.7867s0359 Boechera stricta Bostr.7867s0359 I 0.685
Bostr.7867s0361 Boechera stricta Bostr.7867s0361 I 0.685
Cagra.28753s0001 Capsella grandiflora Cagra.28753s0001 I 0.685
Carubv10005709m.g Capsella rubella Carubv10005709m.g I 0.685
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.685
CBF2 Arabidopsis lyrata fgenesh2_kg.7__1712__AT4G25470.1 I 0.683
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I 0.683
mgf026642m Mimulus guttatus mgf026642m I 0.683
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I 0.682
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I 0.680
Cla002362 Citrullus lanatus Cla002362 I 0.680
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.679
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I 0.678
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.678
evm.TU.supercontig_5.66 Carica papaya evm.TU.supercontig_5.66 I 0.677