SapurV1A.2554s0010 (Salix purpurea)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SapurV1A.2554s0010 T229521_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATHB-22
M02041_2.00 		Arabidopsis thaliana
NNATAATWWWNNN
NNNWWWATTATNN		 PBM
Weirauch et al.(2014)
pTH5883 		0.674 0.456
ATHB-51
M00867_2.00 		Arabidopsis thaliana
ATWATKNN
NNMATWAT		 PBM
Franco-Zorrilla et al.(2014)
ATHB51 		0.665 0.491
ATHB-51
M06927_2.00 		Arabidopsis thaliana
DNCAATAATTGAD
HTCAATTATTGNH		 Dap-seq
OMalley et al.(2016)
LMI1_col_a 		0.665 0.491
ATHB-51
M06928_2.00 		Arabidopsis thaliana
NDNCAATAATTGA
TCAATTATTGNHN		 Dap-seq
OMalley et al.(2016)
LMI1_colamp_a 		0.665 0.491
PK20392.1
M01250_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11331 		0.639 0.544
PK20392.1
M01251_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11332 		0.639 0.544
ATHB-20
M06912_2.00 		Arabidopsis thaliana
HYAATAATTRD
HYAATTATTRD		 Dap-seq
OMalley et al.(2016)
ATHB20_col_a 		0.639 0.526
ATHB-20
M06913_2.00 		Arabidopsis thaliana
HYAATMATTRD
HYAATKATTRD		 Dap-seq
OMalley et al.(2016)
ATHB20_colamp_a 		0.639 0.526
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.2554s0010.1.p Homeodomain 18 74

Links

Other Homeodomain family TFs
Other Salix purpurea TFs

163 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0017s04820 Populus trichocarpa POPTR_0017s04820 I 0.865
SapurV1A.3101s0010 Salix purpurea SapurV1A.3101s0010 I 0.863
29983.m003123 Ricinus communis 29983.m003123 I 0.835
POPTR_0007s01370 Populus trichocarpa POPTR_0007s01370 I 0.769
TCM_031644 Theobroma cacao TCM_031644 I 0.712
Gorai.002G067100 Gossypium raimondii Gorai.002G067100 I 0.712
Lus10003492.g Linum usitatissimum Lus10003492.g I 0.708
Lus10013103.g Linum usitatissimum Lus10013103.g I 0.708
mgf013301m Mimulus guttatus mgf013301m I 0.702
mgf022748m Mimulus guttatus mgf022748m I 0.699
VIT_10s0003g00380 Vitis vinifera VIT_10s0003g00380 I 0.697
PGSC0003DMG402012439 Solanum tuberosum PGSC0003DMG402012439 I 0.695
SapurV1A.0118s0340 Salix purpurea SapurV1A.0118s0340 N 0.694
Solyc07g062790.1 Solanum lycopersicum Solyc07g062790.1 I 0.693
GLYMA10G07440 Glycine max GLYMA10G07440 I 0.687
GLYMA13G21330 Glycine max GLYMA13G21330 I 0.687
MDP0000909160 Malus domestica MDP0000909160 I 0.685
ATHB22 Arabidopsis lyrata Al_scaffold_0004_2163 I 0.676
PGSC0003DMG400021278 Solanum tuberosum PGSC0003DMG400021278 I 0.676
POPTR_0001s40540 Populus trichocarpa POPTR_0001s40540 I 0.676
POPTR_0011s11510 Populus trichocarpa POPTR_0011s11510 I 0.676
SapurV1A.0207s0080 Salix purpurea SapurV1A.0207s0080 I 0.676
PGSC0003DMG400031777 Solanum tuberosum PGSC0003DMG400031777 I 0.675
Solyc02g077590.1 Solanum lycopersicum Solyc02g077590.1 I 0.675
Ciclev10012525m.g Citrus clementina Ciclev10012525m.g I 0.675
orange1.1g040769m.g Citrus sinensis orange1.1g040769m.g I 0.675
ATHB-22 Arabidopsis thaliana AT2G36610 D 0.674
Bo4g034490 Brassica oleracea Bo4g034490 I 0.674
Bra005259 Brassica rapa Bra005259 I 0.674
Bostr.23794s0432 Boechera stricta Bostr.23794s0432 I 0.674
Cagra.0228s0052 Capsella grandiflora Cagra.0228s0052 I 0.674
Carubv10024148m.g Capsella rubella Carubv10024148m.g I 0.674
Thhalv10017567m.g Eutrema salsugineum Thhalv10017567m.g I 0.674
SapurV1A.0226s0110 Salix purpurea SapurV1A.0226s0110 I 0.673
mgf025174m Mimulus guttatus mgf025174m I 0.671
PGSC0003DMG400002692 Solanum tuberosum PGSC0003DMG400002692 I 0.667
Solyc09g008810.2 Solanum lycopersicum Solyc09g008810.2 I 0.667
VIT_08s0007g04200 Vitis vinifera VIT_08s0007g04200 I 0.667
ATHB-51 Arabidopsis thaliana AT5G03790 D 0.665
Bo2g005230 Brassica oleracea Bo2g005230 I 0.665
Bo3g002560 Brassica oleracea Bo3g002560 I 0.665
Bo9g181720 Brassica oleracea Bo9g181720 I 0.665
Bra009510 Brassica rapa Bra009510 I 0.665
Bra028820 Brassica rapa Bra028820 I 0.665
ATHB51 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6000249 I 0.665
POPTR_0006s11890 Populus trichocarpa POPTR_0006s11890 I 0.665
PRUPE_ppa015952mg Prunus persica PRUPE_ppa015952mg I 0.665
TCM_022391 Theobroma cacao TCM_022391 I 0.665
Cla018017 Citrullus lanatus Cla018017 I 0.665
Cla018641 Citrullus lanatus Cla018641 I 0.665
Pm026270 Prunus mume Pm026270 I 0.665
29815.m000499 Ricinus communis 29815.m000499 I 0.665
cassava14646.m1 Manihot esculenta cassava14646.m1 I 0.665
cassava34082.m1 Manihot esculenta cassava34082.m1 I 0.665
Cucsa.125070 Cucumis sativus Cucsa.125070 I 0.665
Cucsa.378700 Cucumis sativus Cucsa.378700 I 0.665
mgf019824m Mimulus guttatus mgf019824m I 0.665
Bostr.2128s0071 Boechera stricta Bostr.2128s0071 I 0.665
Cagra.0154s0025 Capsella grandiflora Cagra.0154s0025 I 0.665
Cagra.0463s0004 Capsella grandiflora Cagra.0463s0004 I 0.665
Carubv10002440m.g Capsella rubella Carubv10002440m.g I 0.665
Carubv10003464m.g Capsella rubella Carubv10003464m.g I 0.665
evm.TU.supercontig_5.106 Carica papaya evm.TU.supercontig_5.106 I 0.665
gene30097-v1.0-hybrid Fragaria vesca gene30097-v1.0-hybrid I 0.665
Gorai.002G244000 Gossypium raimondii Gorai.002G244000 I 0.665
Gorai.002G244200 Gossypium raimondii Gorai.002G244200 I 0.665
Gorai.009G409600 Gossypium raimondii Gorai.009G409600 I 0.665
Lus10008641.g Linum usitatissimum Lus10008641.g I 0.665
Lus10035583.g Linum usitatissimum Lus10035583.g I 0.665
MDP0000119544 Malus domestica MDP0000119544 I 0.665
MDP0000134241 Malus domestica MDP0000134241 I 0.665
MDP0000738604 Malus domestica MDP0000738604 I 0.665
Thhalv10014547m.g Eutrema salsugineum Thhalv10014547m.g I 0.665
PK15535.1 Cannabis sativa PK15535.1 I 0.665
LjSGA_022706.2 Lotus japonicus LjSGA_022706.2 I 0.665
VIT_19s0014g02110 Vitis vinifera VIT_19s0014g02110 I 0.664
Gorai.001G256300 Gossypium raimondii Gorai.001G256300 I 0.662
Aquca_009_01021 Aquilegia coerulea Aquca_009_01021 I 0.660
Eucgr.A01421 Eucalyptus grandis Eucgr.A01421 I 0.658
GLYMA06G35050 Glycine max GLYMA06G35050 I 0.656
PRUPE_ppa017711mg Prunus persica PRUPE_ppa017711mg I 0.656
Pm011328 Prunus mume Pm011328 I 0.656
evm.TU.supercontig_80.1 Carica papaya evm.TU.supercontig_80.1 I 0.656
Thhalv10015784m.g Eutrema salsugineum Thhalv10015784m.g I 0.655
gene18656-v1.0-hybrid Fragaria vesca gene18656-v1.0-hybrid I 0.654
MDP0000146339 Malus domestica MDP0000146339 I 0.654
Eucgr.I01934 Eucalyptus grandis Eucgr.I01934 I 0.648
AMTR_s00027p00144540 Amborella trichopoda AMTR_s00027p00144540 I 0.643
evm.TU.supercontig_83.103 Carica papaya evm.TU.supercontig_83.103 N 0.640
ATHB-20 Arabidopsis thaliana AT3G01220 D 0.639
HAT7 Arabidopsis thaliana AT5G15150 I 0.639
Bo1g158730 Brassica oleracea Bo1g158730 I 0.639
Bo2g012410 Brassica oleracea Bo2g012410 I 0.639
Bo3g010120 Brassica oleracea Bo3g010120 I 0.639
Bo9g165360 Brassica oleracea Bo9g165360 I 0.639
Bra006285 Brassica rapa Bra006285 I 0.639
Bra008717 Brassica rapa Bra008717 I 0.639
Bra023506 Brassica rapa Bra023506 I 0.639
Bra039135 Brassica rapa Bra039135 I 0.639
ATHB-3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6001192 I 0.639
GLYMA09G37410 Glycine max GLYMA09G37410 I 0.639
GLYMA18G49290 Glycine max GLYMA18G49290 I 0.639
GLYMA19G02490 Glycine max GLYMA19G02490 I 0.639
GSMUA_Achr10G18860_001 Musa acuminata GSMUA_Achr10G18860_001 I 0.639
GSMUA_Achr4G00550_001 Musa acuminata GSMUA_Achr4G00550_001 I 0.639
GSMUA_Achr6G36450_001 Musa acuminata GSMUA_Achr6G36450_001 I 0.639
MTR_6g011610 Medicago truncatula MTR_6g011610 I 0.639
POPTR_0017s11800 Populus trichocarpa POPTR_0017s11800 I 0.639
PRUPE_ppa020465mg Prunus persica PRUPE_ppa020465mg I 0.639
ATHB20 Arabidopsis lyrata scaffold_300109.1 I 0.639
TCM_018470 Theobroma cacao TCM_018470 I 0.639
VIT_16s0098g01170 Vitis vinifera VIT_16s0098g01170 I 0.639
Ca_10527 Cicer arietinum Ca_10527 I 0.639
Cla010510 Citrullus lanatus Cla010510 I 0.639
Pm015861 Prunus mume Pm015861 I 0.639
29822.m003500 Ricinus communis 29822.m003500 I 0.639
cassava13234.valid.m1 Manihot esculenta cassava13234.valid.m1 I 0.639
cassava39955.m1 Manihot esculenta cassava39955.m1 I 0.639
Cucsa.158420 Cucumis sativus Cucsa.158420 I 0.639
Bostr.1460s0094 Boechera stricta Bostr.1460s0094 I 0.639
Bostr.2902s0249 Boechera stricta Bostr.2902s0249 I 0.639
Cagra.1036s0042 Capsella grandiflora Cagra.1036s0042 I 0.639
Cagra.1390s0021 Capsella grandiflora Cagra.1390s0021 I 0.639
Carubv10001498m.g Capsella rubella Carubv10001498m.g I 0.639
Carubv10014214m.g Capsella rubella Carubv10014214m.g I 0.639
Ciclev10012352m.g Citrus clementina Ciclev10012352m.g I 0.639
evm.TU.supercontig_14.18 Carica papaya evm.TU.supercontig_14.18 I 0.639
gene28322-v1.0-hybrid Fragaria vesca gene28322-v1.0-hybrid I 0.639
Gorai.006G022100 Gossypium raimondii Gorai.006G022100 I 0.639
MDP0000124827 Malus domestica MDP0000124827 I 0.639
MDP0000737128 Malus domestica MDP0000737128 I 0.639
orange1.1g041877m.g Citrus sinensis orange1.1g041877m.g I 0.639
SapurV1A.1260s0050 Salix purpurea SapurV1A.1260s0050 I 0.639
SapurV1A.2065s0030 Salix purpurea SapurV1A.2065s0030 I 0.639
Thhalv10014157m.g Eutrema salsugineum Thhalv10014157m.g I 0.639
Thhalv10021334m.g Eutrema salsugineum Thhalv10021334m.g I 0.639
PK20392.1 Cannabis sativa PK20392.1 D 0.639
chr2.LjT39I02.10.nc Lotus japonicus chr2.LjT39I02.10.nc I 0.639
MTR_1g061660 Medicago truncatula MTR_1g061660 I 0.638
Ciclev10009522m.g Citrus clementina Ciclev10009522m.g I 0.638
orange1.1g035661m.g Citrus sinensis orange1.1g035661m.g I 0.638
Eucgr.A01575 Eucalyptus grandis Eucgr.A01575 I 0.637
VIT_18s0001g06430 Vitis vinifera VIT_18s0001g06430 I 0.635
gene24976-v1.0-hybrid Fragaria vesca gene24976-v1.0-hybrid I 0.635
ATHB-52 Arabidopsis thaliana AT5G53980 I 0.633
ATHB52 Arabidopsis lyrata fgenesh2_kg.8__1293__AT5G53980.1 I 0.633
GSMUA_Achr6G10660_001 Musa acuminata GSMUA_Achr6G10660_001 I 0.633
BRADI4G35910 Brachypodium distachyon BRADI4G35910 I 0.629
GRMZM2G034113 Zea mays GRMZM2G034113 I 0.629
GRMZM2G041462 Zea mays GRMZM2G041462 I 0.629
Sb02g030660 Sorghum bicolor Sb02g030660 I 0.629
Si030983m.g Setaria italica Si030983m.g I 0.629
Eucgr.I02255 Eucalyptus grandis Eucgr.I02255 I 0.629
Pavir.Ba01249 Panicum virgatum Pavir.Ba01249 I 0.629
Pavir.Bb02633 Panicum virgatum Pavir.Bb02633 I 0.629
PRUPE_ppa010647mg Prunus persica PRUPE_ppa010647mg I 0.623
Pm018314 Prunus mume Pm018314 I 0.623
Pavir.Hb01447 Panicum virgatum Pavir.Hb01447 I 0.623
Bo12274s010 Brassica oleracea Bo12274s010 I 0.620
GLYMA13G05270 Glycine max GLYMA13G05270 I 0.606
Bostr.26833s0878 Boechera stricta Bostr.26833s0878 I 0.601
Cagra.4622s0007 Capsella grandiflora Cagra.4622s0007 I 0.601
Carubv10027280m.g Capsella rubella Carubv10027280m.g I 0.601