Bostr.23794s0027 (Boechera stricta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Bostr.23794s0027 T007600_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q1ESI9_MAIZE
M09714_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB2A_02 		0.692 0.796
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.684 0.837
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.681 0.796
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.23794s0027.1.p AP2 70 121
Bostr.23794s0027.2.p AP2 12 63

Links

Other AP2 family TFs
Other Boechera stricta TFs

91 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DREB2C Arabidopsis lyrata scaffold_402826.1 I 0.746
MDP0000165880 Malus domestica MDP0000165880 I 0.741
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.740
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.740
MDP0000147009 Malus domestica MDP0000147009 I 0.740
MDP0000446783 Malus domestica MDP0000446783 I 0.740
Pm018989 Prunus mume Pm018989 I 0.740
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.735
AT2G40350 Arabidopsis thaliana AT2G40350 I 0.723
Aquca_013_00679 Aquilegia coerulea Aquca_013_00679 I 0.721
BRADI3G12680 Brachypodium distachyon BRADI3G12680 I 0.721
TCM_026121 Theobroma cacao TCM_026121 I 0.716
PRUPE_ppa022996mg Prunus persica PRUPE_ppa022996mg I 0.713
LPERR08G20650 Leersia perrieri LPERR08G20650 I 0.713
F775_01779 Aegilops tauschii F775_01779 I 0.711
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.711
29729.m002292 Ricinus communis 29729.m002292 I 0.705
Bra017011 Brassica rapa Bra017011 I 0.703
Bo4g190040 Brassica oleracea Bo4g190040 I 0.703
Traes_2BL_B397F2CE3 Triticum aestivum Traes_2BL_B397F2CE3 I 0.702
DREB2C Oryza sativa OS08G0565200 I 0.702
ORGLA08G0193700 Oryza glaberrima ORGLA08G0193700 I 0.702
ORUFI08G26490 Oryza rufipogon ORUFI08G26490 I 0.702
OPUNC08G21890 Oryza punctata OPUNC08G21890 I 0.702
BGIOSGA026461 Oryza indica BGIOSGA026461 I 0.702
BGIOSGA026464 Oryza indica BGIOSGA026464 I 0.702
OB08G30790 Oryza brachyantha OB08G30790 I 0.702
OGLUM08G25470 Oryza glumaepatula OGLUM08G25470 I 0.702
ONIVA09G01190 Oryza nivara ONIVA09G01190 I 0.702
OMERI08G18820 Oryza meridionalis OMERI08G18820 I 0.702
F775_02345 Aegilops tauschii F775_02345 I 0.700
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.700
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.700
MLOC_66580 Hordeum vulgare MLOC_66580 I 0.700
Pavir.J25464 Panicum virgatum Pavir.J25464 I 0.700
Traes_2DL_B32203C91 Triticum aestivum Traes_2DL_B32203C91 I 0.700
Si024059m.g Setaria italica Si024059m.g I 0.700
Pavir.J22169 Panicum virgatum Pavir.J22169 I 0.700
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.698
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.698
MLOC_12223 Hordeum vulgare MLOC_12223 I 0.697
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.696
Pavir.Ca01725 Panicum virgatum Pavir.Ca01725 I 0.696
Pavir.Cb01298 Panicum virgatum Pavir.Cb01298 I 0.696
TRIUR3_17409 Triticum urartu TRIUR3_17409 I 0.695
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I 0.695
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I 0.695
F775_32062 Aegilops tauschii F775_32062 I 0.695
Cucsa.119440 Cucumis sativus Cucsa.119440 I 0.694
Sb09g016150 Sorghum bicolor Sb09g016150 I 0.694
Cla001755 Citrullus lanatus Cla001755 I 0.694
LPERR08G12790 Leersia perrieri LPERR08G12790 I 0.694
Lus10010632.g Linum usitatissimum Lus10010632.g I 0.692
GRMZM2G006745 Zea mays GRMZM2G006745 I 0.692
Q1ESI9_MAIZE Zea mays Q1ESI9_MAIZE D 0.692
Cucsa.231820 Cucumis sativus Cucsa.231820 I 0.692
Cla022803 Citrullus lanatus Cla022803 I 0.692
chr1.CM0195.510.nd Lotus japonicus chr1.CM0195.510.nd I 0.690
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.690
Lus10024298.g Linum usitatissimum Lus10024298.g I 0.689
Lus10006127.g Linum usitatissimum Lus10006127.g I 0.689
Si022619m.g Setaria italica Si022619m.g I 0.689
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.688
SELMODRAFT_38498 Selaginella moellendorffii SELMODRAFT_38498 N 0.688
SELMODRAFT_38500 Selaginella moellendorffii SELMODRAFT_38500 N 0.688
Eucgr.F01607 Eucalyptus grandis Eucgr.F01607 I 0.687
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.686
PK07402.1 Cannabis sativa PK07402.1 D 0.684
PK16401.1 Cannabis sativa PK16401.1 N 0.684
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.683
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.683
Ciclev10022244m.g Citrus clementina Ciclev10022244m.g I 0.682
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.682
Bo9g155940 Brassica oleracea Bo9g155940 I 0.681
DREB2G Arabidopsis thaliana AT5G18450 D 0.681
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.681
Bra002159 Brassica rapa Bra002159 I 0.681
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.681
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.681
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.681
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.680
Traes_2AL_3FB37A3E7 Triticum aestivum Traes_2AL_3FB37A3E7 I 0.680
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.680
Cucsa.130200 Cucumis sativus Cucsa.130200 I 0.680
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.679
PGSC0003DMG400003706 Solanum tuberosum PGSC0003DMG400003706 I 0.679
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.679
Solyc04g080910.1 Solanum lycopersicum Solyc04g080910.1 I 0.679
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.677
Cla006713 Citrullus lanatus Cla006713 I 0.677