Bostr.20129s0513 (Boechera stricta)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Bostr.20129s0513 T028186_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.20129s0513.1.p BED ZF 70 121

Links

Other BED ZF family TFs
Other Boechera stricta TFs

80 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10019720m.g Capsella rubella Carubv10019720m.g N 0.977
Bo4g107870 Brassica oleracea Bo4g107870 N 0.977
Cagra.1725s0137 Capsella grandiflora Cagra.1725s0137 N 0.977
Thhalv10022530m.g Eutrema salsugineum Thhalv10022530m.g N 0.909
Bo6g067130 Brassica oleracea Bo6g067130 N 0.909
Eucgr.F03885 Eucalyptus grandis Eucgr.F03885 N 0.864
POPTR_0001s20900 Populus trichocarpa POPTR_0001s20900 N 0.841
SapurV1A.0199s0250 Salix purpurea SapurV1A.0199s0250 N 0.841
PRUPE_ppa002495mg Prunus persica PRUPE_ppa002495mg N 0.841
cassava11655.m1 Manihot esculenta cassava11655.m1 N 0.841
SapurV1A.0344s0280 Salix purpurea SapurV1A.0344s0280 N 0.841
Pm013703 Prunus mume Pm013703 N 0.841
VIT_09s0002g07340 Vitis vinifera VIT_09s0002g07340 N 0.841
POPTR_0003s02610 Populus trichocarpa POPTR_0003s02610 N 0.841
Solyc03g116840.1 Solanum lycopersicum Solyc03g116840.1 N 0.818
gene15718-v1.0-hybrid Fragaria vesca gene15718-v1.0-hybrid N 0.818
PGSC0003DMG400019816 Solanum tuberosum PGSC0003DMG400019816 N 0.818
GLYMA13G22855 Glycine max GLYMA13G22855 N 0.773
Gorai.010G137500 Gossypium raimondii Gorai.010G137500 N 0.773
TCM_027266 Theobroma cacao TCM_027266 N 0.773
Eucgr.C01383 Eucalyptus grandis Eucgr.C01383 N 0.773
GLYMA13G22881 Glycine max GLYMA13G22881 N 0.773
mgf025287m Mimulus guttatus mgf025287m N 0.750
GSMUA_Achr8G29120_001 Musa acuminata GSMUA_Achr8G29120_001 N 0.750
GSMUA_Achr3G16690_001 Musa acuminata GSMUA_Achr3G16690_001 N 0.750
gene30791-v1.0-hybrid Fragaria vesca gene30791-v1.0-hybrid N 0.750
orange1.1g005485m.g Citrus sinensis orange1.1g005485m.g N 0.750
PK27100.1 Cannabis sativa PK27100.1 N 0.750
Traes_4DS_990D31BB1 Triticum aestivum Traes_4DS_990D31BB1 N 0.750
Traes_4AL_54F25AA7C Triticum aestivum Traes_4AL_54F25AA7C N 0.750
MDP0000394762 Malus domestica MDP0000394762 N 0.750
gene31107-v1.0-hybrid Fragaria vesca gene31107-v1.0-hybrid N 0.750
Ciclev10007308m.g Citrus clementina Ciclev10007308m.g N 0.750
Ciclev10025036m.g Citrus clementina Ciclev10025036m.g N 0.750
orange1.1g002915m.g Citrus sinensis orange1.1g002915m.g N 0.750
Traes_4BS_D5227ED8B Triticum aestivum Traes_4BS_D5227ED8B N 0.750
GLYMA17G11981 Glycine max GLYMA17G11981 N 0.750
Sb02g043380 Sorghum bicolor Sb02g043380 N 0.750
MLOC_75540 Hordeum vulgare MLOC_75540 N 0.750
POPTR_0004s12760 Populus trichocarpa POPTR_0004s12760 N 0.744
Carubv10008021m.g Capsella rubella Carubv10008021m.g N 0.727
VIT_11s0016g05750 Vitis vinifera VIT_11s0016g05750 N 0.727
Cagra.13611s0003 Capsella grandiflora Cagra.13611s0003 N 0.727
Gorai.004G107300 Gossypium raimondii Gorai.004G107300 N 0.727
Si034159m.g Setaria italica Si034159m.g N 0.727
Thhalv10009614m.g Eutrema salsugineum Thhalv10009614m.g N 0.727
OB08G27840 Oryza brachyantha OB08G27840 N 0.727
GLYMA07G03280 Glycine max GLYMA07G03280 N 0.727
fgenesh1_pm.C_scaffold_5000603 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5000603 N 0.727
Bo8g066350 Brassica oleracea Bo8g066350 N 0.727
PRUPE_ppa001983mg Prunus persica PRUPE_ppa001983mg N 0.727
Pavir.J31170 Panicum virgatum Pavir.J31170 N 0.727
Pavir.Ia00683 Panicum virgatum Pavir.Ia00683 N 0.727
Pavir.Eb00997 Panicum virgatum Pavir.Eb00997 N 0.727
TCM_038144 Theobroma cacao TCM_038144 N 0.727
Pavir.Eb00995 Panicum virgatum Pavir.Eb00995 N 0.727
Pavir.J05554 Panicum virgatum Pavir.J05554 N 0.727
Si000431m.g Setaria italica Si000431m.g N 0.727
POPTR_0004s12810 Populus trichocarpa POPTR_0004s12810 N 0.721
PK28412.1 Cannabis sativa PK28412.1 N 0.705
Pavir.Ea02468 Panicum virgatum Pavir.Ea02468 N 0.705
SapurV1A.0034s0250 Salix purpurea SapurV1A.0034s0250 N 0.705
SapurV1A.0197s0170 Salix purpurea SapurV1A.0197s0170 N 0.705
Traes_4BS_5B1737D7C Triticum aestivum Traes_4BS_5B1737D7C N 0.705
OB08G27850 Oryza brachyantha OB08G27850 N 0.705
PGSC0003DMG400002911 Solanum tuberosum PGSC0003DMG400002911 N 0.705
PGSC0003DMG400023690 Solanum tuberosum PGSC0003DMG400023690 N 0.705
MLOC_66012 Hordeum vulgare MLOC_66012 N 0.705
GLYMA13G44351 Glycine max GLYMA13G44351 N 0.705
Bo4g137780 Brassica oleracea Bo4g137780 N 0.705
BRADI3G40810 Brachypodium distachyon BRADI3G40810 N 0.705
POPTR_0018s12680 Populus trichocarpa POPTR_0018s12680 N 0.705
POPTR_0018s12690 Populus trichocarpa POPTR_0018s12690 N 0.705
Traes_4DS_9C5CECE46 Triticum aestivum Traes_4DS_9C5CECE46 N 0.705
mgf010516m Mimulus guttatus mgf010516m N 0.705
Traes_4AL_A494372EB Triticum aestivum Traes_4AL_A494372EB N 0.705
Solyc12g009640.1 Solanum lycopersicum Solyc12g009640.1 N 0.705
Sb01g009090 Sorghum bicolor Sb01g009090 N 0.705
Solyc10g080090.1 Solanum lycopersicum Solyc10g080090.1 N 0.705
MDP0000197332 Malus domestica MDP0000197332 N 0.705