Bo3g041690 (Brassica oleracea)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04873 (EIN3) IPR006957 Bo3g041690 T175010_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.915 0.915
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.875 0.875
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.875 0.875
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.875 0.875
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.871 0.871
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.819 0.819
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g041690.1 EIN3 48 298

Links

Other EIN3 family TFs
Other Brassica oleracea TFs

157 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra000528 Brassica rapa Bra000528 I 0.992
EIL1 Arabidopsis thaliana AT2G27050 D 0.919
Carubv10022879m.g Capsella rubella Carubv10022879m.g I 0.915
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.915
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.915
Cagra.6016s0001 Capsella grandiflora Cagra.6016s0001 I 0.915
Bostr.29505s0037 Boechera stricta Bostr.29505s0037 I 0.903
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.891
TCM_042022 Theobroma cacao TCM_042022 I 0.890
POPTR_0004s20830 Populus trichocarpa POPTR_0004s20830 I 0.890
29708.m000185 Ricinus communis 29708.m000185 I 0.887
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.886
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.886
Thhalv10020292m.g Eutrema salsugineum Thhalv10020292m.g I 0.886
gene25474-v1.0-hybrid Fragaria vesca gene25474-v1.0-hybrid I 0.883
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.883
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.883
Cagra.2243s0007 Capsella grandiflora Cagra.2243s0007 I 0.882
Bostr.19424s0573 Boechera stricta Bostr.19424s0573 I 0.882
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.882
Carubv10013213m.g Capsella rubella Carubv10013213m.g I 0.882
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.882
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.879
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.878
EIN3 Arabidopsis lyrata fgenesh2_kg.3__2304__AT3G20770.1 I 0.878
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.878
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.875
Bo5g106280 Brassica oleracea Bo5g106280 I 0.875
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.875
EIN3 Arabidopsis thaliana AT3G20770 D 0.875
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.875
POPTR_0009s16080 Populus trichocarpa POPTR_0009s16080 I 0.874
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.874
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 0.871
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 0.871
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.871
Solyc01g009170.2 Solanum lycopersicum Solyc01g009170.2 I 0.870
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.867
Gorai.013G266300 Gossypium raimondii Gorai.013G266300 I 0.867
Ca_07534 Cicer arietinum Ca_07534 I 0.866
Ca_10236 Cicer arietinum Ca_10236 I 0.863
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.863
MTR_3g078770 Medicago truncatula MTR_3g078770 I 0.863
SapurV1A.0561s0140 Salix purpurea SapurV1A.0561s0140 I 0.859
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.858
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.858
Pm017009 Prunus mume Pm017009 I 0.858
Cucsa.364340 Cucumis sativus Cucsa.364340 I 0.858
gene00379-v1.0-hybrid Fragaria vesca gene00379-v1.0-hybrid I 0.858
Bo1g108650 Brassica oleracea Bo1g108650 I 0.857
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.855
Bo3g076180 Brassica oleracea Bo3g076180 I 0.855
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.855
MDP0000202831 Malus domestica MDP0000202831 I 0.854
Aquca_014_00938 Aquilegia coerulea Aquca_014_00938 I 0.854
Solyc06g073730.1 Solanum lycopersicum Solyc06g073730.1 I 0.851
mgf018950m Mimulus guttatus mgf018950m I 0.851
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I 0.851
Ciclev10000608m.g Citrus clementina Ciclev10000608m.g I 0.850
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.850
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.850
VIT_06s0009g01380 Vitis vinifera VIT_06s0009g01380 I 0.847
PGSC0003DMG400005914 Solanum tuberosum PGSC0003DMG400005914 I 0.847
Bra001802 Brassica rapa Bra001802 I 0.847
Solyc01g096810.2 Solanum lycopersicum Solyc01g096810.2 I 0.846
mgf015996m Mimulus guttatus mgf015996m I 0.845
PK13351.1 Cannabis sativa PK13351.1 I 0.843
PK01239.1 Cannabis sativa PK01239.1 I 0.843
PRUPE_ppa003550mg Prunus persica PRUPE_ppa003550mg I 0.839
POPTR_0008s01200 Populus trichocarpa POPTR_0008s01200 I 0.839
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I 0.839
MDP0000306498 Malus domestica MDP0000306498 I 0.839
MDP0000564884 Malus domestica MDP0000564884 I 0.837
SapurV1A.0036s0870 Salix purpurea SapurV1A.0036s0870 I 0.837
MDP0000212881 Malus domestica MDP0000212881 I 0.837
PGSC0003DMG400027507 Solanum tuberosum PGSC0003DMG400027507 I 0.835
POPTR_0010s25370 Populus trichocarpa POPTR_0010s25370 I 0.835
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.827
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.825
Traes_4BL_F34EBD618 Triticum aestivum Traes_4BL_F34EBD618 I 0.823
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.810
GSMUA_Achr6G15930_001 Musa acuminata GSMUA_Achr6G15930_001 I 0.810
GSMUA_Achr2G11540_001 Musa acuminata GSMUA_Achr2G11540_001 I 0.806
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.806
mgf012394m Mimulus guttatus mgf012394m I 0.802
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.802
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.802
GSMUA_Achr8G21550_001 Musa acuminata GSMUA_Achr8G21550_001 I 0.802
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.798
GRMZM2G317584 Zea mays GRMZM2G317584 I 0.794
Si034616m.g Setaria italica Si034616m.g I 0.794
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I 0.793
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I 0.793
Traes_4DL_C083C804E Triticum aestivum Traes_4DL_C083C804E I 0.790
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.790
Sb01g036740 Sorghum bicolor Sb01g036740 I 0.789
Pavir.Ia03450 Panicum virgatum Pavir.Ia03450 I 0.789
GRMZM2G033570 Zea mays GRMZM2G033570 I 0.789
PRUPE_ppa003493mg Prunus persica PRUPE_ppa003493mg I 0.786
MLOC_14619 Hordeum vulgare MLOC_14619 I 0.781
OGLUM03G15860 Oryza glumaepatula OGLUM03G15860 I 0.781
F775_28545 Aegilops tauschii F775_28545 I 0.781
OS03G0324200 Oryza sativa OS03G0324200 I 0.781
Traes_4AS_2BDA1260C Triticum aestivum Traes_4AS_2BDA1260C I 0.781
OS03G0324300 Oryza sativa OS03G0324300 I 0.781
ORUFI03G16290 Oryza rufipogon ORUFI03G16290 I 0.781
BGIOSGA012535 Oryza indica BGIOSGA012535 I 0.781
ONIVA03G16680 Oryza nivara ONIVA03G16680 I 0.781
OMERI03G14140 Oryza meridionalis OMERI03G14140 I 0.781
OPUNC03G15240 Oryza punctata OPUNC03G15240 I 0.781
ORGLA03G0150600 Oryza glaberrima ORGLA03G0150600 I 0.781
SELMODRAFT_449238 Selaginella moellendorffii SELMODRAFT_449238 I 0.780
OPUNC07G25150 Oryza punctata OPUNC07G25150 I 0.778
evm.TU.supercontig_54.30 Carica papaya evm.TU.supercontig_54.30 I 0.778
PDK_20s1443543g001 Phoenix dactylifera PDK_20s1443543g001 I 0.774
ONIVA07G26490 Oryza nivara ONIVA07G26490 I 0.774
OS07G0685700 Oryza sativa OS07G0685700 I 0.774
ORUFI07G27710 Oryza rufipogon ORUFI07G27710 I 0.774
ORGLA07G0211700 Oryza glaberrima ORGLA07G0211700 I 0.774
BGIOSGA023694 Oryza indica BGIOSGA023694 I 0.774
OMERI07G23380 Oryza meridionalis OMERI07G23380 I 0.769
GSMUA_Achr9G17080_001 Musa acuminata GSMUA_Achr9G17080_001 I 0.769
GRMZM2G151811 Zea mays GRMZM2G151811 I 0.761
GSMUA_Achr11G25120_001 Musa acuminata GSMUA_Achr11G25120_001 I 0.753
Si029213m.g Setaria italica Si029213m.g I 0.745
GRMZM2G003558 Zea mays GRMZM2G003558 I 0.742
Pavir.Bb03705 Panicum virgatum Pavir.Bb03705 I 0.734
OLONG_004360 Oryza longistaminata OLONG_004360 I 0.733
LPERR07G23570 Leersia perrieri LPERR07G23570 I 0.730
OMERI05G02190 Oryza meridionalis OMERI05G02190 I 0.727
GSMUA_Achr3G09440_001 Musa acuminata GSMUA_Achr3G09440_001 I 0.727
Pavir.J01001 Panicum virgatum Pavir.J01001 I 0.726
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.725
Traes_2BS_647C82888 Triticum aestivum Traes_2BS_647C82888 I 0.722
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.718
OBART07G26760 Oryza barthii OBART07G26760 I 0.714
Sb02g043350 Sorghum bicolor Sb02g043350 I 0.714
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.713
TRIUR3_30860 Triticum urartu TRIUR3_30860 I 0.711
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.710
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.710
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.709
30169.m006395 Ricinus communis 30169.m006395 I 0.706
PK19114.1 Cannabis sativa PK19114.1 I 0.706
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.704
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.704
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.704
Bo6g118030 Brassica oleracea Bo6g118030 I 0.703
Pm028171 Prunus mume Pm028171 I 0.703
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.702
SELMODRAFT_16065 Selaginella moellendorffii SELMODRAFT_16065 I 0.702
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.702
SELMODRAFT_16064 Selaginella moellendorffii SELMODRAFT_16064 I 0.702
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.700
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.700
Ca_02669 Cicer arietinum Ca_02669 I 0.700
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.700