GLYMA10G40510 (Glycine max)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03101 (FAR1) IPR004330 GLYMA10G40510 T179455_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FAR1
M06880_2.00 		Arabidopsis thaliana
NNYHCACGCGCYDNH
DNHRGCGCGTGDRNN		 Dap-seq
OMalley et al.(2016)
FAR1_col_a 		0.886 0.886
FAR1
M06881_2.00 		Arabidopsis thaliana
NNNNBDNDNNYHCACGCGCYD
HRGCGCGTGDRNNHNHVNNNN		 Dap-seq
OMalley et al.(2016)
FAR1_colamp_a 		0.886 0.886
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA10G40510.1 FAR1 48 135
GLYMA10G40510.2 FAR1 48 135

Links

Other FAR1 family TFs
Other Glycine max TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA20G26810 Glycine max GLYMA20G26810 I 0.989
gene24215-v1.0-hybrid Fragaria vesca gene24215-v1.0-hybrid I 0.943
PK04639.1 Cannabis sativa PK04639.1 I 0.943
FAR1 Vitis vinifera VIT_03s0017g01810 I 0.933
PRUPE_ppa001511mg Prunus persica PRUPE_ppa001511mg I 0.932
Thhalv10024410m.g Eutrema salsugineum Thhalv10024410m.g I 0.932
Gorai.007G173400 Gossypium raimondii Gorai.007G173400 I 0.932
Pm014858 Prunus mume Pm014858 I 0.932
TCM_002030 Theobroma cacao TCM_002030 I 0.920
SapurV1A.0767s0090 Salix purpurea SapurV1A.0767s0090 I 0.920
Eucgr.C04090 Eucalyptus grandis Eucgr.C04090 I 0.920
Carubv10004178m.g Capsella rubella Carubv10004178m.g I 0.910
Carubv10012703m.g Capsella rubella Carubv10012703m.g I 0.910
Cagra.1850s0019 Capsella grandiflora Cagra.1850s0019 I 0.910
30106.m000672 Ricinus communis 30106.m000672 I 0.909
mgf008053m Mimulus guttatus mgf008053m I 0.909
Cucsa.180090 Cucumis sativus Cucsa.180090 I 0.909
POPTR_0006s02140 Populus trichocarpa POPTR_0006s02140 I 0.909
cassava24584.valid.m1 Manihot esculenta cassava24584.valid.m1 I 0.909
Bostr.0597s0142 Boechera stricta Bostr.0597s0142 I 0.889
Solyc08g060840.1 Solanum lycopersicum Solyc08g060840.1 I 0.886
Bra040696 Brassica rapa Bra040696 I 0.867
FAR1 Arabidopsis thaliana AT4G15090 D 0.867
Bo6g054750 Brassica oleracea Bo6g054750 I 0.867
SapurV1A.0767s0100 Salix purpurea SapurV1A.0767s0100 I 0.846
TCM_013043 Theobroma cacao TCM_013043 I 0.808
MDP0000286803 Malus domestica MDP0000286803 I 0.727
evm.TU.supercontig_8.288 Carica papaya evm.TU.supercontig_8.288 I 0.722
PK08903.1 Cannabis sativa PK08903.1 I 0.716
cassava31125.valid.m1 Manihot esculenta cassava31125.valid.m1 I 0.716
cassava31126.valid.m1 Manihot esculenta cassava31126.valid.m1 I 0.716
cassava31127.valid.m1 Manihot esculenta cassava31127.valid.m1 I 0.716
FHY3 Vitis vinifera VIT_03s0017g01780 I 0.716
cassava31128.valid.m1 Manihot esculenta cassava31128.valid.m1 I 0.716
PRUPE_ppa001344mg Prunus persica PRUPE_ppa001344mg I 0.711
GLYMA06G47210 Glycine max GLYMA06G47210 I 0.711
GLYMA04G14850 Glycine max GLYMA04G14850 I 0.711
Gorai.005G134200 Gossypium raimondii Gorai.005G134200 I 0.711
Pm014859 Prunus mume Pm014859 I 0.711
POPTR_0006s02150 Populus trichocarpa POPTR_0006s02150 I 0.700
SapurV1A.0154s0240 Salix purpurea SapurV1A.0154s0240 I 0.700
Cucsa.180080 Cucumis sativus Cucsa.180080 I 0.700
POPTR_0016s01980 Populus trichocarpa POPTR_0016s01980 I 0.700