Ubp1 (Mus musculus)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 ENSMUSG00000009741 T199107_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within angiogenesis. Predicted to be located in cytosol and nucleoplasm. Predicted to be active in nucleus. Is expressed in several structures, including aorta; early conceptus; genitourinary system; gut gland; and limb. Orthologous to human UBP1 (upstream binding protein 1). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
UBP1
M04893_2.00 		Homo sapiens
NDCYRGHNNNNDCYRGHN
NDCYRGHNNNNDCYRGHN		 SELEX
Yin et al.(2017)
UBP1_eDBD_HT-SELEX 		0.957 0.957
UBP1
M10614_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6_01 		0.957 0.957
UBP1
M10615_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6 		0.957 0.957
UBP1
M04894_2.00 		Homo sapiens
DWCYRGHHNNDDCYRGWH
DWCYRGHHNNDDCYRGWH		 SELEX
Yin et al.(2017)
UBP1_eDBD_Methyl-HT-SELEX 		0.957 0.957
ENSGALG00000002235
M02030_2.00 		Gallus gallus
AACCGGTTA
TAACCGGTT		 PBM
Weirauch et al.(2014)
pTH8565 		0.789 0.789
TFCP2L1
M04885_2.00 		Homo sapiens
DCYRGHHNNNDCYRGH
DCYRGHNNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_HT-SELEX 		0.770 0.770
TFCP2L1
M10609_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP9_01 		0.770 0.770
TFCP2L1
M04886_2.00 		Homo sapiens
DCYRGHHNNDDCYRGH
DCYRGHHNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_Methyl-HT-SELEX 		0.770 0.770
Tcfcp2l1
M08029_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfc2pI1 		0.742 0.742
Tcfcp2l1
M08030_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfcp2I1 		0.742 0.742
Tcfcp2l1
M09127_2.00 		Mus musculus
DDCYRGYTYHNDCYRGHYB
VRDCYRGHNDRARCYRGHH		 Misc
Kulakovskiy et al.(2013)
TF2L1_MOUSE.H11MO.0.C 		0.742 0.742
TFCP2
M03074_2.00 		Homo sapiens
DAWCCGGTTY
RAACCGGWTH		 SELEX
Jolma et al.(2013)
TFCP2_1 		0.706 0.706
TFCP2
M03075_2.00 		Homo sapiens
WCCGGWWHDAWCYGGW
WCCRGWTHDWWCCGGW		 SELEX
Jolma et al.(2013)
TFCP2_2 		0.706 0.706
TFCP2
M04889_2.00 		Homo sapiens
DWCYRGWHNNDWCYRGWH
DWCYRGWHNNDWCYRGWH		 SELEX
Yin et al.(2017)
TFCP2_eDBD_HT-SELEX 		0.706 0.706
TFCP2
M04891_2.00 		Homo sapiens
AWCYGGTTHNDACCGGTW
WACCGGTHNDAACCRGWT		 SELEX
Yin et al.(2017)
TFCP2_FL_HT-SELEX 		0.706 0.706
TFCP2
M10610_2.00 		Homo sapiens
CTKGKTHKDGC
GCHMDAMCMAG		 Transfac
Matys et al.(2006)
V$CP2_01 		0.706 0.706
TFCP2
M10611_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CP2_02 		0.706 0.706
TFCP2
M10612_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CP2_Q4 		0.706 0.706
TFCP2
M10613_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CP2_Q6 		0.706 0.706
TFCP2
M04890_2.00 		Homo sapiens
DWCYRGWHNNDWCYRGWH
DWCYRGWHNNDWCYRGWH		 SELEX
Yin et al.(2017)
TFCP2_eDBD_Methyl-HT-SELEX 		0.706 0.706
TFCP2
M04892_2.00 		Homo sapiens
AWCCGGWTNDAWCCGGTT
AACCGGWTHNAACCGGWT		 SELEX
Yin et al.(2017)
TFCP2_FL_Methyl-HT-SELEX 		0.706 0.706
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000009885 Grainyhead 42 257
ENSMUSP00000081946 Grainyhead 42 257
ENSMUSP00000112192 Grainyhead 42 257

Links

Other Grainyhead family TFs
Other Mus musculus TFs

178 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ubp1 Rattus norvegicus ENSRNOG00000009729 I 0.981
UBP1 Oryctolagus cuniculus ENSOCUG00000011063 I 0.971
UBP1 Pteropus vampyrus ENSPVAG00000004158 I 0.967
UBP1 Cavia porcellus ENSCPOG00000009270 I 0.967
UBP1 Canis familiaris ENSCAFG00000004598 I 0.962
UBP1 Myotis lucifugus ENSMLUG00000010827 I 0.962
ENSCSAG00000009395 Chlorocebus sabaeus ENSCSAG00000009395 I 0.962
UBP1 Callithrix jacchus ENSCJAG00000012030 I 0.962
ENSP00000283629 Macaca fascicularis ENSP00000283629 I 0.962
UBP1 Macaca mulatta ENSMMUG00000016917 I 0.962
ENSMPUG00000013008 Mustela putorius furo ENSMPUG00000013008 I 0.962
ENSAMEG00000002341 Ailuropoda melanoleuca ENSAMEG00000002341 I 0.962
UBP1 Pan troglodytes ENSPTRG00000014733 I 0.962
ENSNLEG00000004651 Nomascus leucogenys ENSNLEG00000004651 I 0.962
ENSPPYG00000014030 Pongo abelii ENSPPYG00000014030 I 0.962
UBP1 Otolemur garnettii ENSOGAG00000000962 I 0.957
UBP1 Ochotona princeps ENSOPRG00000012913 I 0.957
UBP1 Homo sapiens ENSG00000153560 D 0.957
UBP1 Bos taurus ENSBTAG00000003968 I 0.957
ENSOARG00000015881 Ovis aries ENSOARG00000015881 I 0.952
ENSPANG00000003702 Papio anubis ENSPANG00000003702 I 0.943
UBP1 Ornithorhynchus anatinus ENSOANG00000008309 I 0.938
Ogr01415 Ophisaurus gracilis Ogr01415 I 0.933
ENSGALG00000011980 Gallus gallus ENSGALG00000011980 I 0.923
ENSFALG00000004962 Ficedula albicollis ENSFALG00000004962 I 0.923
Afo_R010081 Aptenodytes forsteri Afo_R010081 I 0.919
Gfo_R001955 Geospiza fortis Gfo_R001955 I 0.919
Brh_R008147 Buceros rhinoceros Brh_R008147 I 0.919
Aan_R001501 Calypte anna Aan_R001501 I 0.919
Tal_R012945 Tyto alba Tal_R012945 I 0.919
UBP1 Anolis carolinensis ENSACAG00000013565 I 0.914
ENSLACG00000000718 Latimeria chalumnae ENSLACG00000000718 I 0.904
UBP1 Felis catus ENSFCAG00000006123 I 0.900
Ubp1 Dipodomys ordii ENSDORG00000010133 I 0.900
UBP1 Equus caballus ENSECAG00000018555 I 0.900
Myotis_brandtii_UBP1_10023937 Myotis brandtii Myotis_brandtii_UBP1_10023937 I 0.900
ENSLAFG00000030783 Loxodonta africana ENSLAFG00000030783 I 0.895
UBP1 Sorex araneus ENSSARG00000008670 I 0.895
UBP1 Sus scrofa ENSSSCG00000011235 I 0.890
UBP1 Tursiops truncatus ENSTTRG00000016791 I 0.890
ENSP00000283628-D1 Bos grunniens ENSP00000283628-D1 I 0.890
UBP1 Procavia capensis ENSPCAG00000008237 I 0.890
UBP1 Echinops telfairi ENSETEG00000016510 I 0.890
ENSAPLG00000001472 Anas platyrhynchos ENSAPLG00000001472 I 0.890
ENSSTOG00000012083 Ictidomys tridecemlineatus ENSSTOG00000012083 I 0.876
Alligator_sinensis_CCG001336.1 Alligator sinensis Alligator_sinensis_CCG001336.1 I 0.871
ENSDNOG00000019550 Dasypus novemcinctus ENSDNOG00000019550 I 0.871
ENSPSIG00000003763 Pelodiscus sinensis ENSPSIG00000003763 I 0.866
UBP1 Meleagris gallopavo ENSMGAG00000011814 I 0.852
TFCP2 Pteropus vampyrus ENSPVAG00000014772 I 0.847
Afo_R010616 Aptenodytes forsteri Afo_R010616 I 0.847
ENSPMAG00000006794 Petromyzon marinus ENSPMAG00000006794 I 0.847
tfcp2 Xenopus tropicalis XB-GENE-485720 I 0.847
UBP1 Taeniopygia guttata ENSTGUG00000001752 I 0.847
pou6f1 Takifugu rubripes ENSTRUG00000014900 I 0.842
Pvit_12019 Pogona vitticeps Pvit_12019 I 0.842
ENSPANG00000019744 Papio anubis ENSPANG00000019744 I 0.842
ENSPSIG00000015527 Pelodiscus sinensis ENSPSIG00000015527 I 0.842
ENSAPLG00000012157 Anas platyrhynchos ENSAPLG00000012157 I 0.842
ENSSTOG00000009123 Ictidomys tridecemlineatus ENSSTOG00000009123 I 0.842
TFCP2 Callithrix jacchus ENSCJAG00000017599 I 0.842
ENSP00000257915 Macaca fascicularis ENSP00000257915 I 0.842
ENSMODG00000002605 Monodelphis domestica ENSMODG00000002605 I 0.837
AAP78771 Xenopus laevis AAP78771 I 0.837
AAI06326 Xenopus laevis AAI06326 I 0.837
ENSDNOG00000017309 Dasypus novemcinctus ENSDNOG00000017309 I 0.837
tfcp2 Tetraodon nigroviridis ENSTNIG00000012528 I 0.837
Alligator_sinensis_CCG015050.1 Alligator sinensis Alligator_sinensis_CCG015050.1 I 0.837
ENSLOCG00000002718 Lepisosteus oculatus ENSLOCG00000002718 I 0.837
tfcp2.L Xenopus laevis XB-GENE-865546 I 0.829
ENSSHAG00000002389 Sarcophilus harrisii ENSSHAG00000002389 I 0.828
ENSDNOG00000018905 Dasypus novemcinctus ENSDNOG00000018905 I 0.828
TFCP2 Cavia porcellus ENSCPOG00000007923 I 0.823
ENSONIG00000002320 Oreochromis niloticus ENSONIG00000002320 I 0.818
ubp1 Gasterosteus aculeatus ENSGACG00000005520 I 0.813
ENSLOCG00000004816 Lepisosteus oculatus ENSLOCG00000004816 I 0.809
ubp1 Takifugu rubripes ENSTRUG00000013570 I 0.804
ENSGMOG00000010354 Gadus morhua ENSGMOG00000010354 I 0.804
ENSSHAG00000005805 Sarcophilus harrisii ENSSHAG00000005805 I 0.799
TFCP2 Anolis carolinensis ENSACAG00000012289 I 0.799
Pvit_07455 Pogona vitticeps Pvit_07455 I 0.799
Tfcp2 Rattus norvegicus ENSRNOG00000032395 I 0.794
ENSP00000283628-D2 Bos grunniens ENSP00000283628-D2 I 0.794
TFCP2 Pan troglodytes ENSPTRG00000004949 I 0.794
TFCP2 Vicugna pacos ENSVPAG00000007617 I 0.794
ENSSHAG00000000901 Sarcophilus harrisii ENSSHAG00000000901 I 0.794
ENSPPYG00000004522 Pongo abelii ENSPPYG00000004522 I 0.794
TFCP2 Otolemur garnettii ENSOGAG00000007969 I 0.794
TFCP2 Equus caballus ENSECAG00000020650 I 0.794
ENSNLEG00000017779 Nomascus leucogenys ENSNLEG00000017779 I 0.794
TFCP2 Loxodonta africana ENSLAFG00000009123 I 0.794
TFCP2 Felis catus ENSFCAG00000030292 I 0.794
TFCP2 Homo sapiens ENSG00000135457 D 0.794
TFCP2 Myotis lucifugus ENSMLUG00000013918 I 0.794
TFCP2 Macaca mulatta ENSMMUG00000000152 I 0.794
TFCP2 Canis familiaris ENSCAFG00000007831 I 0.794
ENSCSAG00000005909 Chlorocebus sabaeus ENSCSAG00000005909 I 0.794
TFCP2 Bos taurus ENSBTAG00000019312 I 0.794
ENSAMXG00000016608 Astyanax mexicanus ENSAMXG00000016608 I 0.794
ENSAMEG00000002108 Ailuropoda melanoleuca ENSAMEG00000002108 I 0.794
ENSOARG00000017390 Ovis aries ENSOARG00000017390 I 0.789
Aan_R009566 Calypte anna Aan_R009566 I 0.789
Tfcp2 Mus musculus ENSMUSG00000009733 I 0.789
ENSGALG00000002235 Gallus gallus ENSGALG00000002235 D 0.789
TFCP2 Tursiops truncatus ENSTTRG00000013836 I 0.789
TFCP2 Ochotona princeps ENSOPRG00000005747 I 0.789
Cmyd_10002729 Chelonia mydas Cmyd_10002729 I 0.789
Myotis_brandtii_TFCP2_10023086 Myotis brandtii Myotis_brandtii_TFCP2_10023086 I 0.789
Tal_R010177 Tyto alba Tal_R010177 I 0.789
ENSLACG00000017694 Latimeria chalumnae ENSLACG00000017694 I 0.789
ENSONIG00000016680 Oreochromis niloticus ENSONIG00000016680 I 0.785
tfcp2 Danio rerio ENSDARG00000060306 I 0.785
tfcp2 Oryzias latipes ENSORLG00000015644 I 0.785
tfcp2 Gasterosteus aculeatus ENSGACG00000010929 I 0.785
Gfo_R015659 Geospiza fortis Gfo_R015659 I 0.780
TFCP2 Oryctolagus cuniculus ENSOCUG00000009026 I 0.780
ENSPFOG00000011621 Poecilia formosa ENSPFOG00000011621 I 0.775
TFCP2L1 Gorilla gorilla ENSGGOG00000001680 I 0.770
ENSCSAG00000016679 Chlorocebus sabaeus ENSCSAG00000016679 I 0.770
TFCP2L1 Homo sapiens ENSG00000115112 D 0.770
ENSXMAG00000005202 Xiphophorus maculatus ENSXMAG00000005202 I 0.770
TFCP2L1 Otolemur garnettii ENSOGAG00000012031 I 0.770
ENSTSYG00000013882 Tarsius syrichta ENSTSYG00000013882 I 0.770
TFCP2L1 Oryctolagus cuniculus ENSOCUG00000006877 I 0.770
ENSPANG00000016702 Papio anubis ENSPANG00000016702 I 0.770
TFCP2L1 Microcebus murinus ENSMICG00000007161 I 0.770
TFCP2L1 Monodelphis domestica ENSMODG00000000229 I 0.770
TFCP2L1 Pan troglodytes ENSPTRG00000012415 I 0.770
ENSSHAG00000013877 Sarcophilus harrisii ENSSHAG00000013877 I 0.770
ENSNLEG00000000988 Nomascus leucogenys ENSNLEG00000000988 I 0.770
ENSPPYG00000012777 Pongo abelii ENSPPYG00000012777 I 0.770
TFCP2L1 Ornithorhynchus anatinus ENSOANG00000007591 I 0.766
TFCP2L1 Cavia porcellus ENSCPOG00000011523 I 0.766
TFCP2L1 Callithrix jacchus ENSCJAG00000013356 I 0.766
TFCP2L1 Canis familiaris ENSCAFG00000004788 I 0.766
ENSAMEG00000005284 Ailuropoda melanoleuca ENSAMEG00000005284 I 0.766
ENSGMOG00000007483 Gadus morhua ENSGMOG00000007483 I 0.761
TFCP2L1 Equus caballus ENSECAG00000024837 I 0.761
TFCP2L1 Sus scrofa ENSSSCG00000015732 I 0.761
Myotis_brandtii_TFCP2L1_10019079 Myotis brandtii Myotis_brandtii_TFCP2L1_10019079 I 0.761
Tfcp2l1 Rattus norvegicus ENSRNOG00000002414 I 0.761
ENSOARG00000013124 Ovis aries ENSOARG00000013124 I 0.761
TFCP2L1 Felis catus ENSFCAG00000012143 I 0.756
TFCP2L1 Loxodonta africana ENSLAFG00000006873 I 0.756
TFCP2L1 Bos taurus ENSBTAG00000007765 I 0.756
ENSMPUG00000001036 Mustela putorius furo ENSMPUG00000001036 I 0.756
ENSP00000263707-D1 Bos grunniens ENSP00000263707-D1 I 0.751
TFCP2L1 Anolis carolinensis ENSACAG00000004268 I 0.751
tfcp2l1.S Xenopus laevis XB-GENE-6255174 I 0.751
ENSPSIG00000008408 Pelodiscus sinensis ENSPSIG00000008408 I 0.751
ENSXMAG00000003023 Xiphophorus maculatus ENSXMAG00000003023 I 0.751
ENSSTOG00000013080 Ictidomys tridecemlineatus ENSSTOG00000013080 I 0.751
Pvit_06471 Pogona vitticeps Pvit_06471 I 0.746
Cmyd_10009085 Chelonia mydas Cmyd_10009085 I 0.746
TFCP2L1 Meleagris gallopavo ENSMGAG00000011889 I 0.746
ubp1 Tetraodon nigroviridis ENSTNIG00000016974 I 0.746
ubp1 Oryzias latipes ENSORLG00000011706 I 0.746
TFCP2L1 Gallus gallus ENSGALG00000011635 I 0.746
ENSPFOG00000008378 Poecilia formosa ENSPFOG00000008378 I 0.746
ENSMODG00000014457 Monodelphis domestica ENSMODG00000014457 I 0.746
Tal_R011103 Tyto alba Tal_R011103 I 0.742
ENSAPLG00000015648 Anas platyrhynchos ENSAPLG00000015648 I 0.742
Brh_R004848 Buceros rhinoceros Brh_R004848 I 0.742
Tcfcp2l1 Mus musculus ENSMUSG00000026380 D 0.742
Afo_R006827 Aptenodytes forsteri Afo_R006827 I 0.742
Alligator_sinensis_CCG001515.1 Alligator sinensis Alligator_sinensis_CCG001515.1 I 0.742
ENSPMAG00000003474 Petromyzon marinus ENSPMAG00000003474 I 0.742
Aan_R003641 Calypte anna Aan_R003641 I 0.742
ENSFALG00000013230 Ficedula albicollis ENSFALG00000013230 I 0.742
Gfo_R001211 Geospiza fortis Gfo_R001211 I 0.742
tfcp2l1.L Xenopus laevis XB-GENE-997202 I 0.742
TFCP2L1 Taeniopygia guttata ENSTGUG00000004573 I 0.737
ubp1 Danio rerio ENSDARG00000018000 I 0.727
TFCP2L1 Erinaceus europaeus ENSEEUG00000011003 I 0.722
ENSLACG00000012609 Latimeria chalumnae ENSLACG00000012609 I 0.713
Ogr17000 Ophisaurus gracilis Ogr17000 I 0.713
TFCP2L1 Macaca mulatta ENSMMUG00000008829 I 0.713