Tfcp2l1 (Rattus norvegicus)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 ENSRNOG00000002414 T199214_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within several processes, including determination of adult lifespan; epithelial cell maturation; and negative regulation of transcription by RNA polymerase II. Predicted to be located in cytoplasm and membrane. Predicted to be active in nucleus. Orthologous to human TFCP2L1 (transcription factor CP2 like 1). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TFCP2L1
M04885_2.00 		Homo sapiens
DCYRGHHNNNDCYRGH
DCYRGHNNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_HT-SELEX 		0.990 0.990
TFCP2L1
M10609_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP9_01 		0.990 0.990
TFCP2L1
M04886_2.00 		Homo sapiens
DCYRGHHNNDDCYRGH
DCYRGHHNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_Methyl-HT-SELEX 		0.990 0.990
Tcfcp2l1
M08029_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfc2pI1 		0.981 0.981
Tcfcp2l1
M08030_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfcp2I1 		0.981 0.981
Tcfcp2l1
M09127_2.00 		Mus musculus
DDCYRGYTYHNDCYRGHYB
VRDCYRGHNDRARCYRGHH		 Misc
Kulakovskiy et al.(2013)
TF2L1_MOUSE.H11MO.0.C 		0.981 0.981
ENSGALG00000002235
M02030_2.00 		Gallus gallus
AACCGGTTA
TAACCGGTT		 PBM
Weirauch et al.(2014)
pTH8565 		0.836 0.836
UBP1
M04893_2.00 		Homo sapiens
NDCYRGHNNNNDCYRGHN
NDCYRGHNNNNDCYRGHN		 SELEX
Yin et al.(2017)
UBP1_eDBD_HT-SELEX 		0.773 0.773
UBP1
M10614_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6_01 		0.773 0.773
UBP1
M10615_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6 		0.773 0.773
UBP1
M04894_2.00 		Homo sapiens
DWCYRGHHNNDDCYRGWH
DWCYRGHHNNDDCYRGWH		 SELEX
Yin et al.(2017)
UBP1_eDBD_Methyl-HT-SELEX 		0.773 0.773
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000003280 Grainyhead 27 240

Links

Other Grainyhead family TFs
Other Rattus norvegicus TFs

191 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TFCP2L1 Gorilla gorilla ENSGGOG00000001680 I 0.990
TFCP2L1 Oryctolagus cuniculus ENSOCUG00000006877 I 0.990
TFCP2L1 Pan troglodytes ENSPTRG00000012415 I 0.990
TFCP2L1 Callithrix jacchus ENSCJAG00000013356 I 0.986
ENSNLEG00000000988 Nomascus leucogenys ENSNLEG00000000988 I 0.986
TFCP2L1 Cavia porcellus ENSCPOG00000011523 I 0.986
TFCP2L1 Canis familiaris ENSCAFG00000004788 I 0.986
TFCP2L1 Microcebus murinus ENSMICG00000007161 I 0.986
ENSSTOG00000013080 Ictidomys tridecemlineatus ENSSTOG00000013080 I 0.981
ENSTSYG00000013882 Tarsius syrichta ENSTSYG00000013882 I 0.981
TFCP2L1 Otolemur garnettii ENSOGAG00000012031 I 0.981
ENSCSAG00000016679 Chlorocebus sabaeus ENSCSAG00000016679 I 0.981
ENSPPYG00000012777 Pongo abelii ENSPPYG00000012777 I 0.981
ENSOARG00000013124 Ovis aries ENSOARG00000013124 I 0.981
ENSAMEG00000005284 Ailuropoda melanoleuca ENSAMEG00000005284 I 0.981
Tcfcp2l1 Mus musculus ENSMUSG00000026380 D 0.981
TFCP2L1 Homo sapiens ENSG00000115112 D 0.981
ENSPANG00000016702 Papio anubis ENSPANG00000016702 I 0.981
ENSSHAG00000013877 Sarcophilus harrisii ENSSHAG00000013877 I 0.976
TFCP2L1 Monodelphis domestica ENSMODG00000000229 I 0.976
TFCP2L1 Sus scrofa ENSSSCG00000015732 I 0.976
TFCP2L1 Bos taurus ENSBTAG00000007765 I 0.976
TFCP2L1 Felis catus ENSFCAG00000012143 I 0.971
TFCP2L1 Ornithorhynchus anatinus ENSOANG00000007591 I 0.971
ENSP00000263707-D1 Bos grunniens ENSP00000263707-D1 I 0.971
TFCP2L1 Loxodonta africana ENSLAFG00000006873 I 0.967
TFCP2L1 Equus caballus ENSECAG00000024837 I 0.966
Myotis_brandtii_TFCP2L1_10019079 Myotis brandtii Myotis_brandtii_TFCP2L1_10019079 I 0.957
TFCP2L1 Gallus gallus ENSGALG00000011635 I 0.952
Gfo_R001211 Geospiza fortis Gfo_R001211 I 0.952
TFCP2L1 Meleagris gallopavo ENSMGAG00000011889 I 0.952
Aan_R003641 Calypte anna Aan_R003641 I 0.951
Tal_R011103 Tyto alba Tal_R011103 I 0.951
Brh_R004848 Buceros rhinoceros Brh_R004848 I 0.951
Afo_R006827 Aptenodytes forsteri Afo_R006827 I 0.951
ENSPSIG00000008408 Pelodiscus sinensis ENSPSIG00000008408 I 0.947
ENSFALG00000013230 Ficedula albicollis ENSFALG00000013230 I 0.943
TFCP2L1 Taeniopygia guttata ENSTGUG00000004573 I 0.942
TFCP2L1 Anolis carolinensis ENSACAG00000004268 I 0.942
Cmyd_10009085 Chelonia mydas Cmyd_10009085 I 0.942
ENSAPLG00000015648 Anas platyrhynchos ENSAPLG00000015648 I 0.938
Pvit_06471 Pogona vitticeps Pvit_06471 I 0.937
TFCP2L1 Macaca mulatta ENSMMUG00000008829 I 0.932
Alligator_sinensis_CCG001515.1 Alligator sinensis Alligator_sinensis_CCG001515.1 I 0.928
tfcp2l1.S Xenopus laevis XB-GENE-6255174 I 0.908
tfcp2l1.L Xenopus laevis XB-GENE-997202 I 0.903
ENSMPUG00000001036 Mustela putorius furo ENSMPUG00000001036 I 0.894
ENSPMAG00000007229 Petromyzon marinus ENSPMAG00000007229 I 0.864
TFCP2L1 Myotis lucifugus ENSMLUG00000002967 I 0.859
TFCP2L1 Erinaceus europaeus ENSEEUG00000011003 I 0.854
TFCP2 Homo sapiens ENSG00000135457 D 0.845
Pvit_07455 Pogona vitticeps Pvit_07455 I 0.841
ENSNLEG00000017779 Nomascus leucogenys ENSNLEG00000017779 I 0.841
TFCP2 Macaca mulatta ENSMMUG00000000152 I 0.841
ENSPPYG00000004522 Pongo abelii ENSPPYG00000004522 I 0.841
ENSPANG00000019744 Papio anubis ENSPANG00000019744 I 0.841
TFCP2 Pan troglodytes ENSPTRG00000004949 I 0.841
TFCP2 Otolemur garnettii ENSOGAG00000007969 I 0.841
TFCP2 Canis familiaris ENSCAFG00000007831 I 0.841
ENSAMEG00000002108 Ailuropoda melanoleuca ENSAMEG00000002108 I 0.841
TFCP2 Felis catus ENSFCAG00000030292 I 0.841
ENSCSAG00000005909 Chlorocebus sabaeus ENSCSAG00000005909 I 0.841
TFCP2 Equus caballus ENSECAG00000020650 I 0.841
TFCP2 Callithrix jacchus ENSCJAG00000017599 I 0.841
ENSTGUG00000015251 Taeniopygia guttata ENSTGUG00000015251 I 0.839
ENSLACG00000017694 Latimeria chalumnae ENSLACG00000017694 I 0.836
ENSSHAG00000000901 Sarcophilus harrisii ENSSHAG00000000901 I 0.836
Tal_R010177 Tyto alba Tal_R010177 I 0.836
TFCP2L1 Tursiops truncatus ENSTTRG00000003387 I 0.836
TFCP2 Vicugna pacos ENSVPAG00000007617 I 0.836
Aan_R009566 Calypte anna Aan_R009566 I 0.836
ENSOARG00000017390 Ovis aries ENSOARG00000017390 I 0.831
Myotis_brandtii_TFCP2_10023086 Myotis brandtii Myotis_brandtii_TFCP2_10023086 I 0.831
Cmyd_10002729 Chelonia mydas Cmyd_10002729 I 0.831
Pvit_12019 Pogona vitticeps Pvit_12019 I 0.827
Tfcp2 Mus musculus ENSMUSG00000009733 I 0.826
ENSGALG00000002235 Gallus gallus ENSGALG00000002235 D 0.824
Tfcp2 Rattus norvegicus ENSRNOG00000032395 I 0.824
TFCP2 Loxodonta africana ENSLAFG00000009123 I 0.821
TFCP2 Myotis lucifugus ENSMLUG00000013918 I 0.820
TFCP2 Bos taurus ENSBTAG00000019312 I 0.820
TFCP2 Tursiops truncatus ENSTTRG00000013836 I 0.820
TFCP2 Anolis carolinensis ENSACAG00000012289 I 0.820
ENSP00000283628-D2 Bos grunniens ENSP00000283628-D2 I 0.820
ENSLACG00000012609 Latimeria chalumnae ENSLACG00000012609 I 0.817
TFCP2 Ochotona princeps ENSOPRG00000005747 I 0.815
Gfo_R015659 Geospiza fortis Gfo_R015659 I 0.815
Tfcp2l1 Dipodomys ordii ENSDORG00000004265 I 0.814
ENSDNOG00000019550 Dasypus novemcinctus ENSDNOG00000019550 I 0.812
tfcp2 Danio rerio ENSDARG00000060306 I 0.812
tfcp2 Gasterosteus aculeatus ENSGACG00000010929 I 0.812
ENSLAFG00000030783 Loxodonta africana ENSLAFG00000030783 I 0.808
UBP1 Equus caballus ENSECAG00000018555 I 0.807
Myotis_brandtii_UBP1_10023937 Myotis brandtii Myotis_brandtii_UBP1_10023937 I 0.807
ENSAMXG00000016608 Astyanax mexicanus ENSAMXG00000016608 I 0.807
UBP1 Sus scrofa ENSSSCG00000011235 I 0.807
UBP1 Felis catus ENSFCAG00000006123 I 0.807
ENSP00000283628-D1 Bos grunniens ENSP00000283628-D1 I 0.802
ENSPMAG00000003474 Petromyzon marinus ENSPMAG00000003474 I 0.802
tfcp2 Oryzias latipes ENSORLG00000015644 I 0.802
UBP1 Echinops telfairi ENSETEG00000016510 I 0.798
UBP1 Procavia capensis ENSPCAG00000008237 I 0.798
Ubp1 Dipodomys ordii ENSDORG00000010133 I 0.797
UBP1 Sorex araneus ENSSARG00000008670 I 0.797
ENSP00000257915 Macaca fascicularis ENSP00000257915 I 0.797
Ogr17000 Ophisaurus gracilis Ogr17000 I 0.797
ENSSTOG00000009123 Ictidomys tridecemlineatus ENSSTOG00000009123 I 0.797
ENSDNOG00000017309 Dasypus novemcinctus ENSDNOG00000017309 I 0.796
UBP1 Meleagris gallopavo ENSMGAG00000011814 I 0.794
ENSLOCG00000004816 Lepisosteus oculatus ENSLOCG00000004816 I 0.793
UBP1 Tursiops truncatus ENSTTRG00000016791 I 0.793
ENSOARG00000015881 Ovis aries ENSOARG00000015881 I 0.792
tfcp2 Xenopus tropicalis XB-GENE-485720 I 0.790
Afo_R010616 Aptenodytes forsteri Afo_R010616 I 0.787
ENSXMAG00000005202 Xiphophorus maculatus ENSXMAG00000005202 I 0.787
ENSONIG00000016680 Oreochromis niloticus ENSONIG00000016680 I 0.787
ubp1 Tetraodon nigroviridis ENSTNIG00000016974 I 0.787
TFCP2L1 Pteropus vampyrus ENSPVAG00000001653 I 0.784
ENSPSIG00000015527 Pelodiscus sinensis ENSPSIG00000015527 I 0.784
Alligator_sinensis_CCG015050.1 Alligator sinensis Alligator_sinensis_CCG015050.1 I 0.783
ENSGMOG00000007483 Gadus morhua ENSGMOG00000007483 I 0.783
ENSXMAG00000003023 Xiphophorus maculatus ENSXMAG00000003023 I 0.783
ENSDNOG00000018905 Dasypus novemcinctus ENSDNOG00000018905 I 0.783
ubp1 Oryzias latipes ENSORLG00000011706 I 0.783
tfcp2.L Xenopus laevis XB-GENE-865546 I 0.781
TFCP2 Pteropus vampyrus ENSPVAG00000014772 I 0.781
ENSMODG00000002605 Monodelphis domestica ENSMODG00000002605 I 0.780
ENSLOCG00000002070 Lepisosteus oculatus ENSLOCG00000002070 I 0.778
ENSPFOG00000008378 Poecilia formosa ENSPFOG00000008378 I 0.778
TFCP2 Cavia porcellus ENSCPOG00000007923 I 0.776
AAP78771 Xenopus laevis AAP78771 I 0.776
UBP1 Homo sapiens ENSG00000153560 D 0.773
AAI06326 Xenopus laevis AAI06326 I 0.773
ENSSHAG00000002389 Sarcophilus harrisii ENSSHAG00000002389 I 0.773
ubp1 Takifugu rubripes ENSTRUG00000013570 I 0.773
ENSPSIG00000003763 Pelodiscus sinensis ENSPSIG00000003763 I 0.771
ENSPFOG00000011621 Poecilia formosa ENSPFOG00000011621 I 0.770
ENSLACG00000000718 Latimeria chalumnae ENSLACG00000000718 I 0.769
ENSCSAG00000009395 Chlorocebus sabaeus ENSCSAG00000009395 I 0.768
ENSP00000283629 Macaca fascicularis ENSP00000283629 I 0.768
ENSNLEG00000004651 Nomascus leucogenys ENSNLEG00000004651 I 0.768
UBP1 Myotis lucifugus ENSMLUG00000010827 I 0.768
UBP1 Oryctolagus cuniculus ENSOCUG00000011063 I 0.768
UBP1 Callithrix jacchus ENSCJAG00000012030 I 0.768
ENSAPLG00000012157 Anas platyrhynchos ENSAPLG00000012157 I 0.768
UBP1 Pan troglodytes ENSPTRG00000014733 I 0.768
Ubp1 Rattus norvegicus ENSRNOG00000009729 I 0.768
UBP1 Cavia porcellus ENSCPOG00000009270 I 0.768
UBP1 Pteropus vampyrus ENSPVAG00000004158 I 0.768
ENSPPYG00000014030 Pongo abelii ENSPPYG00000014030 I 0.768
UBP1 Macaca mulatta ENSMMUG00000016917 I 0.768
ENSAMEG00000002341 Ailuropoda melanoleuca ENSAMEG00000002341 I 0.764
ENSMPUG00000013008 Mustela putorius furo ENSMPUG00000013008 I 0.764
UBP1 Canis familiaris ENSCAFG00000004598 I 0.764
UBP1 Bos taurus ENSBTAG00000003968 I 0.763
ENSPANG00000003702 Papio anubis ENSPANG00000003702 I 0.763
pou6f1 Takifugu rubripes ENSTRUG00000014900 I 0.763
ENSLOCG00000002718 Lepisosteus oculatus ENSLOCG00000002718 I 0.763
ubp1 Danio rerio ENSDARG00000018000 I 0.761
Ubp1 Mus musculus ENSMUSG00000009741 I 0.761
UBP1 Otolemur garnettii ENSOGAG00000000962 I 0.760
UBP1 Ochotona princeps ENSOPRG00000012913 I 0.760
Alligator_sinensis_CCG001336.1 Alligator sinensis Alligator_sinensis_CCG001336.1 I 0.759
ENSSTOG00000012083 Ictidomys tridecemlineatus ENSSTOG00000012083 I 0.749
tfcp2 Tetraodon nigroviridis ENSTNIG00000012528 I 0.749
ENSP00000263707 Macaca fascicularis ENSP00000263707 I 0.749
Tal_R012945 Tyto alba Tal_R012945 I 0.744
ENSAPLG00000001472 Anas platyrhynchos ENSAPLG00000001472 I 0.744
Gfo_R001955 Geospiza fortis Gfo_R001955 I 0.744
UBP1 Ornithorhynchus anatinus ENSOANG00000008309 I 0.744
Afo_R010081 Aptenodytes forsteri Afo_R010081 I 0.744
ENSFALG00000004962 Ficedula albicollis ENSFALG00000004962 I 0.744
Aan_R001501 Calypte anna Aan_R001501 I 0.744
Brh_R008147 Buceros rhinoceros Brh_R008147 I 0.744
Ogr01415 Ophisaurus gracilis Ogr01415 I 0.742
ENSGALG00000011980 Gallus gallus ENSGALG00000011980 I 0.737
UBP1 Anolis carolinensis ENSACAG00000013565 I 0.734
ENSFALG00000004724 Ficedula albicollis ENSFALG00000004724 I 0.734
ENSONIG00000004467 Oreochromis niloticus ENSONIG00000004467 I 0.732
ENSPMAG00000006794 Petromyzon marinus ENSPMAG00000006794 I 0.732
TFCP2 Oryctolagus cuniculus ENSOCUG00000009026 I 0.729
ENSMODG00000014457 Monodelphis domestica ENSMODG00000014457 I 0.728
ENSONIG00000002320 Oreochromis niloticus ENSONIG00000002320 I 0.725
ENSSHAG00000005805 Sarcophilus harrisii ENSSHAG00000005805 I 0.720
ubp1 Gasterosteus aculeatus ENSGACG00000005520 I 0.715
Alligator_sinensis_CCG020804.1 Alligator sinensis Alligator_sinensis_CCG020804.1 N 0.710
tfcp2l1 Danio rerio ENSDARG00000029497 N 0.705
ENSGMOG00000010354 Gadus morhua ENSGMOG00000010354 I 0.705
ENSECAG00000023454 Equus caballus ENSECAG00000023454 I 0.701
ENSSHAG00000002647 Sarcophilus harrisii ENSSHAG00000002647 I 0.700
ENSACAG00000017482 Anolis carolinensis ENSACAG00000017482 I 0.700