tfcp2l1.L (Xenopus laevis)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04516 (CP2) IPR007604 XB-GENE-997202 T199615_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TFCP2L1
M04885_2.00 		Homo sapiens
DCYRGHHNNNDCYRGH
DCYRGHNNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_HT-SELEX 		0.908 0.908
TFCP2L1
M10609_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP9_01 		0.908 0.908
TFCP2L1
M04886_2.00 		Homo sapiens
DCYRGHHNNDDCYRGH
DCYRGHHNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_Methyl-HT-SELEX 		0.908 0.908
Tcfcp2l1
M08029_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfc2pI1 		0.894 0.894
Tcfcp2l1
M08030_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfcp2I1 		0.894 0.894
Tcfcp2l1
M09127_2.00 		Mus musculus
DDCYRGYTYHNDCYRGHYB
VRDCYRGHNDRARCYRGHH		 Misc
Kulakovskiy et al.(2013)
TF2L1_MOUSE.H11MO.0.C 		0.894 0.894
ENSGALG00000002235
M02030_2.00 		Gallus gallus
AACCGGTTA
TAACCGGTT		 PBM
Weirauch et al.(2014)
pTH8565 		0.841 0.841
UBP1
M04893_2.00 		Homo sapiens
NDCYRGHNNNNDCYRGHN
NDCYRGHNNNNDCYRGHN		 SELEX
Yin et al.(2017)
UBP1_eDBD_HT-SELEX 		0.754 0.754
UBP1
M10614_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6_01 		0.754 0.754
UBP1
M10615_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6 		0.754 0.754
UBP1
M04894_2.00 		Homo sapiens
DWCYRGHHNNDDCYRGWH
DWCYRGHHNNDDCYRGWH		 SELEX
Yin et al.(2017)
UBP1_eDBD_Methyl-HT-SELEX 		0.754 0.754
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH44100 Grainyhead 27 240

Links

Other Grainyhead family TFs
Other Xenopus laevis TFs

201 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
tfcp2l1.S Xenopus laevis XB-GENE-6255174 I 0.976
ENSSARG00000013877 Sorex araneus ENSSARG00000013877 I 0.942
Gfo_R001211 Geospiza fortis Gfo_R001211 I 0.932
Aan_R003641 Calypte anna Aan_R003641 I 0.932
TFCP2L1 Gallus gallus ENSGALG00000011635 I 0.932
ENSPSIG00000008408 Pelodiscus sinensis ENSPSIG00000008408 I 0.932
Tal_R011103 Tyto alba Tal_R011103 I 0.932
Brh_R004848 Buceros rhinoceros Brh_R004848 I 0.932
TFCP2L1 Meleagris gallopavo ENSMGAG00000011889 I 0.932
Afo_R006827 Aptenodytes forsteri Afo_R006827 I 0.932
TFCP2L1 Taeniopygia guttata ENSTGUG00000004573 I 0.927
ENSFALG00000013230 Ficedula albicollis ENSFALG00000013230 I 0.923
Cmyd_10009085 Chelonia mydas Cmyd_10009085 I 0.923
ENSAPLG00000015648 Anas platyrhynchos ENSAPLG00000015648 I 0.919
TFCP2L1 Anolis carolinensis ENSACAG00000004268 I 0.914
ENSGGOG00000023919 Gorilla gorilla ENSGGOG00000023919 I 0.913
Alligator_sinensis_CCG001515.1 Alligator sinensis Alligator_sinensis_CCG001515.1 I 0.913
Pvit_06471 Pogona vitticeps Pvit_06471 I 0.913
TFCP2L1 Canis familiaris ENSCAFG00000004788 I 0.913
ENSAMEG00000005284 Ailuropoda melanoleuca ENSAMEG00000005284 I 0.913
TFCP2L1 Monodelphis domestica ENSMODG00000000229 I 0.910
ENSSHAG00000013877 Sarcophilus harrisii ENSSHAG00000013877 I 0.910
TFCP2L1 Pan troglodytes ENSPTRG00000012415 I 0.908
TFCP2L1 Microcebus murinus ENSMICG00000007161 I 0.908
ENSOARG00000013124 Ovis aries ENSOARG00000013124 I 0.908
ENSNLEG00000000988 Nomascus leucogenys ENSNLEG00000000988 I 0.908
TFCP2L1 Oryctolagus cuniculus ENSOCUG00000006877 I 0.904
TFCP2L1 Loxodonta africana ENSLAFG00000006873 I 0.904
TFCP2L1 Gorilla gorilla ENSGGOG00000001680 I 0.904
ENSTSYG00000013882 Tarsius syrichta ENSTSYG00000013882 I 0.903
Tfcp2l1 Rattus norvegicus ENSRNOG00000002414 I 0.903
ENSPANG00000016702 Papio anubis ENSPANG00000016702 I 0.900
TFCP2L1 Otolemur garnettii ENSOGAG00000012031 I 0.900
ENSPPYG00000012777 Pongo abelii ENSPPYG00000012777 I 0.900
TFCP2L1 Sus scrofa ENSSSCG00000015732 I 0.900
TFCP2L1 Homo sapiens ENSG00000115112 D 0.900
ENSCSAG00000016679 Chlorocebus sabaeus ENSCSAG00000016679 I 0.900
TFCP2L1 Cavia porcellus ENSCPOG00000011523 I 0.899
TFCP2L1 Bos taurus ENSBTAG00000007765 I 0.899
TFCP2L1 Felis catus ENSFCAG00000012143 I 0.895
TFCP2L1 Equus caballus ENSECAG00000024837 I 0.894
ENSP00000263707-D1 Bos grunniens ENSP00000263707-D1 I 0.894
Tcfcp2l1 Mus musculus ENSMUSG00000026380 D 0.894
ENSSTOG00000013080 Ictidomys tridecemlineatus ENSSTOG00000013080 I 0.894
TFCP2 Sorex araneus ENSSARG00000002127 I 0.893
TFCP2L1 Ornithorhynchus anatinus ENSOANG00000007591 I 0.893
Myotis_brandtii_TFCP2L1_10019079 Myotis brandtii Myotis_brandtii_TFCP2L1_10019079 I 0.885
ENSPMAG00000007229 Petromyzon marinus ENSPMAG00000007229 I 0.879
ENSP00000263707 Macaca fascicularis ENSP00000263707 I 0.867
ENSMPUG00000000711 Mustela putorius furo ENSMPUG00000000711 I 0.863
TFCP2L1 Macaca mulatta ENSMMUG00000008829 I 0.856
ENSTGUG00000015251 Taeniopygia guttata ENSTGUG00000015251 I 0.851
ENSMGAG00000005564 Meleagris gallopavo ENSMGAG00000005564 I 0.851
TFCP2L1 Callithrix jacchus ENSCJAG00000013356 I 0.850
Aan_R009566 Calypte anna Aan_R009566 I 0.841
Tal_R010177 Tyto alba Tal_R010177 I 0.841
TFCP2 Homo sapiens ENSG00000135457 D 0.839
Cmyd_10002729 Chelonia mydas Cmyd_10002729 I 0.836
TFCP2 Vicugna pacos ENSVPAG00000007617 I 0.831
Pvit_07455 Pogona vitticeps Pvit_07455 I 0.829
ENSGALG00000002235 Gallus gallus ENSGALG00000002235 D 0.829
tfcp2 Gasterosteus aculeatus ENSGACG00000010929 I 0.828
ENSLACG00000012609 Latimeria chalumnae ENSLACG00000012609 I 0.828
Myotis_brandtii_TFCP2_10023086 Myotis brandtii Myotis_brandtii_TFCP2_10023086 I 0.826
ENSOARG00000017390 Ovis aries ENSOARG00000017390 I 0.826
Gfo_R015659 Geospiza fortis Gfo_R015659 I 0.825
TFCP2 Anolis carolinensis ENSACAG00000012289 I 0.825
ENSMEUG00000009266 Macropus eugenii ENSMEUG00000009266 I 0.822
ENSMICG00000010940 Microcebus murinus ENSMICG00000010940 I 0.820
TFCP2 Macaca mulatta ENSMMUG00000000152 I 0.820
TFCP2 Otolemur garnettii ENSOGAG00000007969 I 0.820
TFCP2 Felis catus ENSFCAG00000030292 I 0.820
ENSCSAG00000005909 Chlorocebus sabaeus ENSCSAG00000005909 I 0.820
tfcp2 Danio rerio ENSDARG00000060306 I 0.820
TFCP2 Callithrix jacchus ENSCJAG00000017599 I 0.820
TFCP2 Canis familiaris ENSCAFG00000007831 I 0.820
ENSAMEG00000002108 Ailuropoda melanoleuca ENSAMEG00000002108 I 0.820
ENSONIG00000016680 Oreochromis niloticus ENSONIG00000016680 I 0.820
TFCP2 Equus caballus ENSECAG00000020650 I 0.820
ENSNLEG00000017779 Nomascus leucogenys ENSNLEG00000017779 I 0.820
ENSPANG00000019744 Papio anubis ENSPANG00000019744 I 0.820
TFCP2 Pan troglodytes ENSPTRG00000004949 I 0.820
ENSPPYG00000004522 Pongo abelii ENSPPYG00000004522 I 0.820
ENSMPUG00000001036 Mustela putorius furo ENSMPUG00000001036 I 0.818
TFCP2 Loxodonta africana ENSLAFG00000009123 I 0.816
TFCP2 Bos taurus ENSBTAG00000019312 I 0.815
TFCP2 Myotis lucifugus ENSMLUG00000013918 I 0.815
ENSP00000283628-D2 Bos grunniens ENSP00000283628-D2 I 0.815
Tfcp2 Rattus norvegicus ENSRNOG00000032395 I 0.814
Tfcp2 Mus musculus ENSMUSG00000009733 I 0.814
ENSSHAG00000000901 Sarcophilus harrisii ENSSHAG00000000901 I 0.811
ENSAMXG00000016608 Astyanax mexicanus ENSAMXG00000016608 I 0.811
ENSSTOG00000012083 Ictidomys tridecemlineatus ENSSTOG00000012083 I 0.811
TFCP2 Ochotona princeps ENSOPRG00000005747 I 0.810
TFCP2 Tursiops truncatus ENSTTRG00000013836 I 0.810
ENSLOCG00000004816 Lepisosteus oculatus ENSLOCG00000004816 I 0.808
Pvit_12019 Pogona vitticeps Pvit_12019 I 0.805
tfcp2 Xenopus tropicalis XB-GENE-485720 I 0.805
tfcp2 Oryzias latipes ENSORLG00000015644 I 0.803
ENSSTOG00000009123 Ictidomys tridecemlineatus ENSSTOG00000009123 I 0.801
ENSP00000257915 Macaca fascicularis ENSP00000257915 I 0.801
TFCP2L1 Erinaceus europaeus ENSEEUG00000011003 I 0.801
ENSLACG00000017694 Latimeria chalumnae ENSLACG00000017694 I 0.800
ENSPMAG00000003474 Petromyzon marinus ENSPMAG00000003474 I 0.800
AAP78771 Xenopus laevis AAP78771 I 0.800
ENSPFOG00000011621 Poecilia formosa ENSPFOG00000011621 I 0.798
Afo_R010616 Aptenodytes forsteri Afo_R010616 I 0.797
Ogr17000 Ophisaurus gracilis Ogr17000 I 0.797
ENSDNOG00000017309 Dasypus novemcinctus ENSDNOG00000017309 I 0.796
AAI06326 Xenopus laevis AAI06326 I 0.796
Alligator_sinensis_CCG015050.1 Alligator sinensis Alligator_sinensis_CCG015050.1 I 0.796
tfcp2.L Xenopus laevis XB-GENE-865546 I 0.795
ENSPSIG00000015527 Pelodiscus sinensis ENSPSIG00000015527 I 0.793
TFCP2L1 Myotis lucifugus ENSMLUG00000002967 I 0.791
ENSXMAG00000005202 Xiphophorus maculatus ENSXMAG00000005202 I 0.790
ENSDNOG00000019550 Dasypus novemcinctus ENSDNOG00000019550 I 0.787
TFCP2 Pteropus vampyrus ENSPVAG00000014772 I 0.786
ENSXMAG00000003023 Xiphophorus maculatus ENSXMAG00000003023 I 0.785
TFCP2L1 Tursiops truncatus ENSTTRG00000003387 I 0.784
ENSLACG00000000718 Latimeria chalumnae ENSLACG00000000718 I 0.784
ENSLAFG00000030783 Loxodonta africana ENSLAFG00000030783 I 0.784
ENSGMOG00000007483 Gadus morhua ENSGMOG00000007483 I 0.784
ENSOANG00000031853 Ornithorhynchus anatinus ENSOANG00000031853 I 0.782
UBP1 Equus caballus ENSECAG00000018555 I 0.780
Myotis_brandtii_UBP1_10023937 Myotis brandtii Myotis_brandtii_UBP1_10023937 I 0.780
UBP1 Sus scrofa ENSSSCG00000011235 I 0.780
UBP1 Felis catus ENSFCAG00000006123 I 0.780
ENSPFOG00000008378 Poecilia formosa ENSPFOG00000008378 I 0.779
UBP1 Procavia capensis ENSPCAG00000008237 I 0.779
ENSDNOG00000018905 Dasypus novemcinctus ENSDNOG00000018905 I 0.778
pou6f1 Takifugu rubripes ENSTRUG00000014900 I 0.778
UBP1 Sorex araneus ENSSARG00000008670 I 0.778
ENSAPLG00000012157 Anas platyrhynchos ENSAPLG00000012157 I 0.777
TFCP2 Cavia porcellus ENSCPOG00000007923 I 0.776
ENSPSIG00000017477 Pelodiscus sinensis ENSPSIG00000017477 I 0.775
ENSP00000283628-D1 Bos grunniens ENSP00000283628-D1 I 0.775
UBP1 Tursiops truncatus ENSTTRG00000016791 I 0.774
Ubp1 Dipodomys ordii ENSDORG00000010133 I 0.774
ubp1 Danio rerio ENSDARG00000018000 I 0.770
ENSPMAG00000006794 Petromyzon marinus ENSPMAG00000006794 I 0.770
UBP1 Meleagris gallopavo ENSMGAG00000011814 I 0.770
UBP1 Echinops telfairi ENSETEG00000016510 I 0.769
ubp1 Takifugu rubripes ENSTRUG00000013570 I 0.768
ubp1 Oryzias latipes ENSORLG00000011706 I 0.766
ENSOARG00000015881 Ovis aries ENSOARG00000015881 I 0.766
tfcp2 Tetraodon nigroviridis ENSTNIG00000012528 I 0.763
ENSSHAG00000002389 Sarcophilus harrisii ENSSHAG00000002389 I 0.762
ubp1 Tetraodon nigroviridis ENSTNIG00000016974 I 0.757
ENSPSIG00000003763 Pelodiscus sinensis ENSPSIG00000003763 I 0.757
ENSMODG00000002605 Monodelphis domestica ENSMODG00000002605 I 0.756
ENSONIG00000004467 Oreochromis niloticus ENSONIG00000004467 I 0.756
ENSLOCG00000002718 Lepisosteus oculatus ENSLOCG00000002718 I 0.754
Tfcp2l1 Dipodomys ordii ENSDORG00000004265 I 0.754
ENSLOCG00000002070 Lepisosteus oculatus ENSLOCG00000002070 I 0.752
UBP1 Homo sapiens ENSG00000153560 D 0.750
UBP1 Pteropus vampyrus ENSPVAG00000004158 I 0.749
ENSNLEG00000004651 Nomascus leucogenys ENSNLEG00000004651 I 0.745
ENSAMEG00000002341 Ailuropoda melanoleuca ENSAMEG00000002341 I 0.745
UBP1 Macaca mulatta ENSMMUG00000016917 I 0.745
UBP1 Pan troglodytes ENSPTRG00000014733 I 0.745
ENSP00000283629 Macaca fascicularis ENSP00000283629 I 0.745
Ubp1 Rattus norvegicus ENSRNOG00000009729 I 0.745
ENSCSAG00000009395 Chlorocebus sabaeus ENSCSAG00000009395 I 0.745
ENSMPUG00000013008 Mustela putorius furo ENSMPUG00000013008 I 0.745
UBP1 Callithrix jacchus ENSCJAG00000012030 I 0.745
UBP1 Cavia porcellus ENSCPOG00000009270 I 0.745
ENSPPYG00000014030 Pongo abelii ENSPPYG00000014030 I 0.745
UBP1 Canis familiaris ENSCAFG00000004598 I 0.745
UBP1 Myotis lucifugus ENSMLUG00000010827 I 0.745
UBP1 Oryctolagus cuniculus ENSOCUG00000011063 I 0.742
Ubp1 Mus musculus ENSMUSG00000009741 I 0.742
UBP1 Otolemur garnettii ENSOGAG00000000962 I 0.740
UBP1 Ochotona princeps ENSOPRG00000012913 I 0.740
ENSPANG00000003702 Papio anubis ENSPANG00000003702 I 0.740
UBP1 Bos taurus ENSBTAG00000003968 I 0.740
ENSAPLG00000001472 Anas platyrhynchos ENSAPLG00000001472 I 0.737
Alligator_sinensis_CCG001336.1 Alligator sinensis Alligator_sinensis_CCG001336.1 I 0.736
TFCP2 Oryctolagus cuniculus ENSOCUG00000009026 I 0.733
UBP1 Anolis carolinensis ENSACAG00000013565 I 0.730
ENSSHAG00000005805 Sarcophilus harrisii ENSSHAG00000005805 I 0.728
Ogr01415 Ophisaurus gracilis Ogr01415 I 0.727
Brh_R008147 Buceros rhinoceros Brh_R008147 I 0.726
Tal_R012945 Tyto alba Tal_R012945 I 0.726
Afo_R010081 Aptenodytes forsteri Afo_R010081 I 0.726
Gfo_R001955 Geospiza fortis Gfo_R001955 I 0.726
Aan_R001501 Calypte anna Aan_R001501 I 0.726
ENSGALG00000011980 Gallus gallus ENSGALG00000011980 I 0.722
UBP1 Ornithorhynchus anatinus ENSOANG00000008309 I 0.722
ENSONIG00000002320 Oreochromis niloticus ENSONIG00000002320 I 0.720
ubp1 Gasterosteus aculeatus ENSGACG00000005520 I 0.720
TFCP2L1 Pteropus vampyrus ENSPVAG00000001653 I 0.719
ENSSHAG00000001157 Sarcophilus harrisii ENSSHAG00000001157 I 0.717
ENSFALG00000004962 Ficedula albicollis ENSFALG00000004962 I 0.716
TFCP2 Echinops telfairi ENSETEG00000010787 I 0.714
ENSFALG00000004724 Ficedula albicollis ENSFALG00000004724 I 0.714
ENSMODG00000014457 Monodelphis domestica ENSMODG00000014457 I 0.708
ENSGMOG00000010354 Gadus morhua ENSGMOG00000010354 I 0.705
ENSGGOG00000025429 Gorilla gorilla ENSGGOG00000025429 I 0.705
ENSPFOG00000001485 Poecilia formosa ENSPFOG00000001485 N 0.702
tfcp2l1 Tetraodon nigroviridis ENSTNIG00000017829 N 0.701
ENSACAG00000017482 Anolis carolinensis ENSACAG00000017482 I 0.700