ubp1 (Tetraodon nigroviridis)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 ENSTNIG00000016974 T199266_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSGALG00000002235
M02030_2.00 		Gallus gallus
AACCGGTTA
TAACCGGTT		 PBM
Weirauch et al.(2014)
pTH8565 		0.838 0.838
TFCP2L1
M04885_2.00 		Homo sapiens
DCYRGHHNNNDCYRGH
DCYRGHNNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_HT-SELEX 		0.795 0.795
TFCP2L1
M10609_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP9_01 		0.795 0.795
TFCP2L1
M04886_2.00 		Homo sapiens
DCYRGHHNNDDCYRGH
DCYRGHHNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_Methyl-HT-SELEX 		0.795 0.795
Tcfcp2l1
M08029_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfc2pI1 		0.776 0.776
Tcfcp2l1
M08030_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfcp2I1 		0.776 0.776
Tcfcp2l1
M09127_2.00 		Mus musculus
DDCYRGYTYHNDCYRGHYB
VRDCYRGHNDRARCYRGHH		 Misc
Kulakovskiy et al.(2013)
TF2L1_MOUSE.H11MO.0.C 		0.776 0.776
UBP1
M04893_2.00 		Homo sapiens
NDCYRGHNNNNDCYRGHN
NDCYRGHNNNNDCYRGHN		 SELEX
Yin et al.(2017)
UBP1_eDBD_HT-SELEX 		0.743 0.743
UBP1
M10614_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6_01 		0.743 0.743
UBP1
M10615_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6 		0.743 0.743
UBP1
M04894_2.00 		Homo sapiens
DWCYRGHHNNDDCYRGWH
DWCYRGHHNNDDCYRGWH		 SELEX
Yin et al.(2017)
UBP1_eDBD_Methyl-HT-SELEX 		0.743 0.743
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000020097 Grainyhead 42 258

Links

Other Grainyhead family TFs
Other Tetraodon nigroviridis TFs

189 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ubp1 Takifugu rubripes ENSTRUG00000013570 I 0.976
ENSXMAG00000003023 Xiphophorus maculatus ENSXMAG00000003023 I 0.933
ENSPFOG00000008378 Poecilia formosa ENSPFOG00000008378 I 0.933
ubp1 Oryzias latipes ENSORLG00000011706 I 0.914
ENSONIG00000002320 Oreochromis niloticus ENSONIG00000002320 I 0.874
ENSGMOG00000010354 Gadus morhua ENSGMOG00000010354 I 0.845
ubp1 Gasterosteus aculeatus ENSGACG00000005520 I 0.843
TFCP2 Echinops telfairi ENSETEG00000010787 I 0.843
Pvit_07455 Pogona vitticeps Pvit_07455 I 0.839
ENSGALG00000002235 Gallus gallus ENSGALG00000002235 D 0.838
Aan_R009566 Calypte anna Aan_R009566 I 0.836
Tal_R010177 Tyto alba Tal_R010177 I 0.836
TFCP2 Ochotona princeps ENSOPRG00000005747 I 0.834
ubp1 Danio rerio ENSDARG00000018000 I 0.833
ENSOARG00000017390 Ovis aries ENSOARG00000017390 I 0.833
Myotis_brandtii_TFCP2_10023086 Myotis brandtii Myotis_brandtii_TFCP2_10023086 I 0.833
TFCP2 Vicugna pacos ENSVPAG00000007617 I 0.831
Cmyd_10002729 Chelonia mydas Cmyd_10002729 I 0.831
ENSMGAG00000016919 Meleagris gallopavo ENSMGAG00000016919 I 0.830
TFCP2 Otolemur garnettii ENSOGAG00000007969 I 0.829
ENSAMEG00000002108 Ailuropoda melanoleuca ENSAMEG00000002108 I 0.829
TFCP2 Myotis lucifugus ENSMLUG00000013918 I 0.829
TFCP2 Felis catus ENSFCAG00000030292 I 0.829
ENSP00000283628-D2 Bos grunniens ENSP00000283628-D2 I 0.829
TFCP2 Pan troglodytes ENSPTRG00000004949 I 0.829
TFCP2 Macaca mulatta ENSMMUG00000000152 I 0.829
ENSSHAG00000000901 Sarcophilus harrisii ENSSHAG00000000901 I 0.829
ENSPPYG00000004522 Pongo abelii ENSPPYG00000004522 I 0.829
TFCP2 Equus caballus ENSECAG00000020650 I 0.829
TFCP2 Anolis carolinensis ENSACAG00000012289 I 0.829
TFCP2 Homo sapiens ENSG00000135457 D 0.829
ENSNLEG00000017779 Nomascus leucogenys ENSNLEG00000017779 I 0.829
TFCP2 Tursiops truncatus ENSTTRG00000013836 I 0.829
ENSCSAG00000005909 Chlorocebus sabaeus ENSCSAG00000005909 I 0.829
ENSPANG00000019744 Papio anubis ENSPANG00000019744 I 0.829
TFCP2 Callithrix jacchus ENSCJAG00000017599 I 0.829
TFCP2 Bos taurus ENSBTAG00000019312 I 0.829
TFCP2 Canis familiaris ENSCAFG00000007831 I 0.829
TFCP2 Loxodonta africana ENSLAFG00000009123 I 0.825
Gfo_R015659 Geospiza fortis Gfo_R015659 I 0.825
Tfcp2 Rattus norvegicus ENSRNOG00000032395 I 0.824
Tfcp2 Mus musculus ENSMUSG00000009733 I 0.824
ENSAMXG00000016608 Astyanax mexicanus ENSAMXG00000016608 I 0.819
Pvit_12019 Pogona vitticeps Pvit_12019 I 0.816
ENSSTOG00000012083 Ictidomys tridecemlineatus ENSSTOG00000012083 I 0.816
ENSTGUG00000015251 Taeniopygia guttata ENSTGUG00000015251 I 0.814
tfcp2 Gasterosteus aculeatus ENSGACG00000010929 I 0.814
ENSDNOG00000019550 Dasypus novemcinctus ENSDNOG00000019550 I 0.812
UBP1 Echinops telfairi ENSETEG00000016510 I 0.812
Ogr17000 Ophisaurus gracilis Ogr17000 I 0.812
UBP1 Tursiops truncatus ENSTTRG00000016791 I 0.812
ENSSHAG00000013877 Sarcophilus harrisii ENSSHAG00000013877 I 0.810
TFCP2L1 Monodelphis domestica ENSMODG00000000229 I 0.810
Myotis_brandtii_UBP1_10023937 Myotis brandtii Myotis_brandtii_UBP1_10023937 I 0.810
tfcp2 Danio rerio ENSDARG00000060306 I 0.810
UBP1 Meleagris gallopavo ENSMGAG00000011814 I 0.809
UBP1 Equus caballus ENSECAG00000018555 I 0.809
UBP1 Sus scrofa ENSSSCG00000011235 I 0.809
ENSMGAG00000005564 Meleagris gallopavo ENSMGAG00000005564 I 0.809
UBP1 Felis catus ENSFCAG00000006123 I 0.809
Ubp1 Dipodomys ordii ENSDORG00000010133 I 0.808
ENSPSIG00000003763 Pelodiscus sinensis ENSPSIG00000003763 I 0.808
TFCP2 Sorex araneus ENSSARG00000002127 I 0.806
UBP1 Sorex araneus ENSSARG00000008670 I 0.805
ENSLOCG00000004816 Lepisosteus oculatus ENSLOCG00000004816 I 0.803
ENSPMAG00000007229 Petromyzon marinus ENSPMAG00000007229 I 0.800
ENSP00000283628-D1 Bos grunniens ENSP00000283628-D1 I 0.800
ENSPPYG00000012777 Pongo abelii ENSPPYG00000012777 I 0.799
ENSPANG00000016702 Papio anubis ENSPANG00000016702 I 0.799
TFCP2L1 Otolemur garnettii ENSOGAG00000012031 I 0.799
ENSOARG00000015881 Ovis aries ENSOARG00000015881 I 0.799
TFCP2L1 Gorilla gorilla ENSGGOG00000001680 I 0.799
TFCP2L1 Sus scrofa ENSSSCG00000015732 I 0.799
TFCP2L1 Homo sapiens ENSG00000115112 D 0.799
ENSCSAG00000016679 Chlorocebus sabaeus ENSCSAG00000016679 I 0.799
TFCP2L1 Oryctolagus cuniculus ENSOCUG00000006877 I 0.798
tfcp2 Oryzias latipes ENSORLG00000015644 I 0.798
UBP1 Procavia capensis ENSPCAG00000008237 I 0.798
TFCP2L1 Canis familiaris ENSCAFG00000004788 I 0.797
TFCP2L1 Microcebus murinus ENSMICG00000007161 I 0.796
ENSNLEG00000000988 Nomascus leucogenys ENSNLEG00000000988 I 0.796
TFCP2L1 Felis catus ENSFCAG00000012143 I 0.795
ENSXMAG00000005202 Xiphophorus maculatus ENSXMAG00000005202 I 0.795
Alligator_sinensis_CCG001515.1 Alligator sinensis Alligator_sinensis_CCG001515.1 I 0.793
TFCP2L1 Bos taurus ENSBTAG00000007765 I 0.793
ENSLAFG00000030783 Loxodonta africana ENSLAFG00000030783 I 0.793
Cmyd_10009085 Chelonia mydas Cmyd_10009085 I 0.793
ENSPSIG00000008408 Pelodiscus sinensis ENSPSIG00000008408 I 0.792
ENSONIG00000016680 Oreochromis niloticus ENSONIG00000016680 I 0.791
ENSMICG00000010940 Microcebus murinus ENSMICG00000010940 I 0.791
Alligator_sinensis_CCG001336.1 Alligator sinensis Alligator_sinensis_CCG001336.1 I 0.791
ENSTSYG00000013882 Tarsius syrichta ENSTSYG00000013882 I 0.791
ENSSHAG00000002389 Sarcophilus harrisii ENSSHAG00000002389 I 0.791
TFCP2L1 Gallus gallus ENSGALG00000011635 I 0.790
ENSOARG00000013124 Ovis aries ENSOARG00000013124 I 0.790
ENSPMAG00000003474 Petromyzon marinus ENSPMAG00000003474 I 0.790
ENSGMOG00000007483 Gadus morhua ENSGMOG00000007483 I 0.789
TFCP2L1 Loxodonta africana ENSLAFG00000006873 I 0.789
ENSPFOG00000011621 Poecilia formosa ENSPFOG00000011621 I 0.789
TFCP2L1 Anolis carolinensis ENSACAG00000004268 I 0.789
ENSAPLG00000015648 Anas platyrhynchos ENSAPLG00000015648 I 0.789
ENSFALG00000013230 Ficedula albicollis ENSFALG00000013230 I 0.789
ENSP00000263707-D1 Bos grunniens ENSP00000263707-D1 I 0.788
Tfcp2l1 Rattus norvegicus ENSRNOG00000002414 I 0.787
Tcfcp2l1 Mus musculus ENSMUSG00000026380 D 0.787
Afo_R006827 Aptenodytes forsteri Afo_R006827 I 0.786
Aan_R003641 Calypte anna Aan_R003641 I 0.786
TFCP2L1 Pan troglodytes ENSPTRG00000012415 I 0.786
Brh_R004848 Buceros rhinoceros Brh_R004848 I 0.786
Tal_R011103 Tyto alba Tal_R011103 I 0.786
Pvit_06471 Pogona vitticeps Pvit_06471 I 0.784
ENSSTOG00000013080 Ictidomys tridecemlineatus ENSSTOG00000013080 I 0.783
ENSDNOG00000018905 Dasypus novemcinctus ENSDNOG00000018905 I 0.783
TFCP2L1 Taeniopygia guttata ENSTGUG00000004573 I 0.782
ENSLOCG00000002718 Lepisosteus oculatus ENSLOCG00000002718 I 0.781
ENSLACG00000012609 Latimeria chalumnae ENSLACG00000012609 I 0.781
ENSAMEG00000005284 Ailuropoda melanoleuca ENSAMEG00000005284 I 0.781
TFCP2L1 Meleagris gallopavo ENSMGAG00000011889 I 0.781
ENSMODG00000002605 Monodelphis domestica ENSMODG00000002605 I 0.780
tfcp2l1.S Xenopus laevis XB-GENE-6255174 I 0.778
Afo_R010616 Aptenodytes forsteri Afo_R010616 I 0.778
ENSDNOG00000017309 Dasypus novemcinctus ENSDNOG00000017309 I 0.777
ENSP00000257915 Macaca fascicularis ENSP00000257915 I 0.777
ENSSTOG00000009123 Ictidomys tridecemlineatus ENSSTOG00000009123 I 0.777
TFCP2L1 Ornithorhynchus anatinus ENSOANG00000007591 I 0.776
Gfo_R001211 Geospiza fortis Gfo_R001211 I 0.776
Myotis_brandtii_TFCP2L1_10019079 Myotis brandtii Myotis_brandtii_TFCP2L1_10019079 I 0.775
ENSPSIG00000015527 Pelodiscus sinensis ENSPSIG00000015527 I 0.774
TFCP2L1 Equus caballus ENSECAG00000024837 I 0.771
TFCP2L1 Cavia porcellus ENSCPOG00000011523 I 0.771
tfcp2 Xenopus tropicalis XB-GENE-485720 I 0.771
Alligator_sinensis_CCG015050.1 Alligator sinensis Alligator_sinensis_CCG015050.1 I 0.767
pou6f1 Takifugu rubripes ENSTRUG00000014900 I 0.767
tfcp2.L Xenopus laevis XB-GENE-865546 I 0.767
TFCP2 Pteropus vampyrus ENSPVAG00000014772 I 0.767
ENSAPLG00000012157 Anas platyrhynchos ENSAPLG00000012157 I 0.763
ENSAPLG00000001472 Anas platyrhynchos ENSAPLG00000001472 I 0.761
TFCP2 Cavia porcellus ENSCPOG00000007923 I 0.757
tfcp2l1.L Xenopus laevis XB-GENE-997202 I 0.757
AAP78771 Xenopus laevis AAP78771 I 0.757
ENSSHAG00000005805 Sarcophilus harrisii ENSSHAG00000005805 I 0.757
AAI06326 Xenopus laevis AAI06326 I 0.754
tfcp2 Tetraodon nigroviridis ENSTNIG00000012528 I 0.754
TFCP2L1 Macaca mulatta ENSMMUG00000008829 I 0.752
TFCP2L1 Callithrix jacchus ENSCJAG00000013356 I 0.750
ENSMPUG00000000711 Mustela putorius furo ENSMPUG00000000711 I 0.750
UBP1 Homo sapiens ENSG00000153560 D 0.750
ENSLACG00000000718 Latimeria chalumnae ENSLACG00000000718 I 0.750
ENSP00000263707 Macaca fascicularis ENSP00000263707 I 0.747
Ubp1 Mus musculus ENSMUSG00000009741 I 0.746
ENSAMEG00000002341 Ailuropoda melanoleuca ENSAMEG00000002341 I 0.745
ENSP00000283629 Macaca fascicularis ENSP00000283629 I 0.745
ENSNLEG00000004651 Nomascus leucogenys ENSNLEG00000004651 I 0.745
ENSCSAG00000009395 Chlorocebus sabaeus ENSCSAG00000009395 I 0.745
ENSPPYG00000014030 Pongo abelii ENSPPYG00000014030 I 0.745
UBP1 Macaca mulatta ENSMMUG00000016917 I 0.745
UBP1 Ochotona princeps ENSOPRG00000012913 I 0.745
UBP1 Canis familiaris ENSCAFG00000004598 I 0.745
UBP1 Pan troglodytes ENSPTRG00000014733 I 0.745
UBP1 Callithrix jacchus ENSCJAG00000012030 I 0.745
ENSMPUG00000013008 Mustela putorius furo ENSMPUG00000013008 I 0.745
UBP1 Cavia porcellus ENSCPOG00000009270 I 0.745
ENSFALG00000004962 Ficedula albicollis ENSFALG00000004962 I 0.743
ENSGALG00000011980 Gallus gallus ENSGALG00000011980 I 0.742
UBP1 Bos taurus ENSBTAG00000003968 I 0.740
UBP1 Otolemur garnettii ENSOGAG00000000962 I 0.740
Tal_R012945 Tyto alba Tal_R012945 I 0.738
Gfo_R001955 Geospiza fortis Gfo_R001955 I 0.738
UBP1 Oryctolagus cuniculus ENSOCUG00000011063 I 0.738
Brh_R008147 Buceros rhinoceros Brh_R008147 I 0.738
UBP1 Myotis lucifugus ENSMLUG00000010827 I 0.738
Ubp1 Rattus norvegicus ENSRNOG00000009729 I 0.738
UBP1 Pteropus vampyrus ENSPVAG00000004158 I 0.738
Afo_R010081 Aptenodytes forsteri Afo_R010081 I 0.738
Aan_R001501 Calypte anna Aan_R001501 I 0.738
Ogr01415 Ophisaurus gracilis Ogr01415 I 0.737
UBP1 Ornithorhynchus anatinus ENSOANG00000008309 I 0.737
TFCP2L1 Myotis lucifugus ENSMLUG00000002967 I 0.733
ENSPANG00000003702 Papio anubis ENSPANG00000003702 I 0.733
ENSFALG00000004724 Ficedula albicollis ENSFALG00000004724 I 0.733
ENSPMAG00000006794 Petromyzon marinus ENSPMAG00000006794 I 0.727
UBP1 Anolis carolinensis ENSACAG00000013565 I 0.725
ENSMODG00000014457 Monodelphis domestica ENSMODG00000014457 I 0.723
ENSMPUG00000001036 Mustela putorius furo ENSMPUG00000001036 I 0.720
ENSLACG00000017694 Latimeria chalumnae ENSLACG00000017694 I 0.719
TFCP2 Procavia capensis ENSPCAG00000014181 I 0.717
TFCP2 Oryctolagus cuniculus ENSOCUG00000009026 I 0.714
ENSACAG00000017482 Anolis carolinensis ENSACAG00000017482 I 0.710
ENSLOCG00000002070 Lepisosteus oculatus ENSLOCG00000002070 I 0.706