scaffold_702446.1 (Arabidopsis lyrata)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 scaffold_702446.1 T242020_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_702446.1 HSF 12 104

Links

Other HSF family TFs
Other Arabidopsis lyrata TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cagra.3262s0013 Capsella grandiflora Cagra.3262s0013 I 0.544
Carubv10006026m.g Capsella rubella Carubv10006026m.g I 0.535
Carubv10006025m.g Capsella rubella Carubv10006025m.g I 0.533
Cagra.3262s0011 Capsella grandiflora Cagra.3262s0011 I 0.533
Cagra.3262s0014 Capsella grandiflora Cagra.3262s0014 I 0.530
AT4G19630 Arabidopsis thaliana AT4G19630 N 0.403
scaffold_702441.1 Arabidopsis lyrata scaffold_702441.1 I 0.397
Cagra.3262s0012 Capsella grandiflora Cagra.3262s0012 I 0.392
scaffold_600621.1 Arabidopsis lyrata scaffold_600621.1 I 0.381
Bra025611 Brassica rapa Bra025611 N 0.379
Bostr.20129s0193 Boechera stricta Bostr.20129s0193 I 0.379
Bostr.27895s0020 Boechera stricta Bostr.27895s0020 N 0.373
Bra025606 Brassica rapa Bra025606 I 0.372
Bo4g139630 Brassica oleracea Bo4g139630 I 0.368
Bra025635 Brassica rapa Bra025635 I 0.367
Bra025608 Brassica rapa Bra025608 I 0.365
Thhalv10026540m.g Eutrema salsugineum Thhalv10026540m.g I 0.363
Bo4g139200 Brassica oleracea Bo4g139200 I 0.363
Thhalv10028027m.g Eutrema salsugineum Thhalv10028027m.g I 0.359
Bostr.30275s0431 Boechera stricta Bostr.30275s0431 I 0.359
Bo4g139270 Brassica oleracea Bo4g139270 N 0.358
Thhalv10027510m.g Eutrema salsugineum Thhalv10027510m.g I 0.357
Bra002882 Brassica rapa Bra002882 I 0.357
Cagra.0096s0075 Capsella grandiflora Cagra.0096s0075 I 0.353
Carubv10021131m.g Capsella rubella Carubv10021131m.g I 0.353
Al_scaffold_0003_3814 Arabidopsis lyrata Al_scaffold_0003_3814 I 0.349
Bra030021 Brassica rapa Bra030021 I 0.348
Bostr.26959s0010 Boechera stricta Bostr.26959s0010 I 0.348
Thhalv10003411m.g Eutrema salsugineum Thhalv10003411m.g I 0.346
Thhalv10028026m.g Eutrema salsugineum Thhalv10028026m.g I 0.345
Thhalv10012073m.g Eutrema salsugineum Thhalv10012073m.g I 0.343
Carubv10014950m.g Capsella rubella Carubv10014950m.g N 0.340
Cagra.2516s0029 Capsella grandiflora Cagra.2516s0029 N 0.334
Cagra.13025s0006 Capsella grandiflora Cagra.13025s0006 I 0.334
Gorai.007G053900 Gossypium raimondii Gorai.007G053900 I 0.330
AT1G77570 Arabidopsis thaliana AT1G77570 I 0.327
scaffold_702873.1 Arabidopsis lyrata scaffold_702873.1 I 0.326
Bra013406 Brassica rapa Bra013406 I 0.326
Bostr.3359s0057 Boechera stricta Bostr.3359s0057 I 0.325
SMU15027452 Schmidtea mediterranea SMU15027452 I 0.323
orange1.1g015635m.g Citrus sinensis orange1.1g015635m.g I 0.322
VIT_10s0003g01770 Vitis vinifera VIT_10s0003g01770 I 0.319