CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
scaffold_702446.1
(
Arabidopsis lyrata
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00447 (HSF_DNA-bind)
IPR000232
scaffold_702446.1
T242020_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold_702446.1
HSF
12
104
FHVKVYKVVEDPSTDAIISWGKDNNSFVIWNLEELISSKILWRFHCMKFPEFHSELRYYGFQRIKNGSGELEFGNEDFVRGQPERLKNMVMRA
Links
Other
HSF
family TFs
Other
Arabidopsis lyrata
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.3262s0013
Capsella grandiflora
Cagra.3262s0013
I
0.544
Carubv10006026m.g
Capsella rubella
Carubv10006026m.g
I
0.535
Carubv10006025m.g
Capsella rubella
Carubv10006025m.g
I
0.533
Cagra.3262s0011
Capsella grandiflora
Cagra.3262s0011
I
0.533
Cagra.3262s0014
Capsella grandiflora
Cagra.3262s0014
I
0.530
AT4G19630
Arabidopsis thaliana
AT4G19630
N
0.403
scaffold_702441.1
Arabidopsis lyrata
scaffold_702441.1
I
0.397
Cagra.3262s0012
Capsella grandiflora
Cagra.3262s0012
I
0.392
scaffold_600621.1
Arabidopsis lyrata
scaffold_600621.1
I
0.381
Bra025611
Brassica rapa
Bra025611
N
0.379
Bostr.20129s0193
Boechera stricta
Bostr.20129s0193
I
0.379
Bostr.27895s0020
Boechera stricta
Bostr.27895s0020
N
0.373
Bra025606
Brassica rapa
Bra025606
I
0.372
Bo4g139630
Brassica oleracea
Bo4g139630
I
0.368
Bra025635
Brassica rapa
Bra025635
I
0.367
Bra025608
Brassica rapa
Bra025608
I
0.365
Thhalv10026540m.g
Eutrema salsugineum
Thhalv10026540m.g
I
0.363
Bo4g139200
Brassica oleracea
Bo4g139200
I
0.363
Thhalv10028027m.g
Eutrema salsugineum
Thhalv10028027m.g
I
0.359
Bostr.30275s0431
Boechera stricta
Bostr.30275s0431
I
0.359
Bo4g139270
Brassica oleracea
Bo4g139270
N
0.358
Thhalv10027510m.g
Eutrema salsugineum
Thhalv10027510m.g
I
0.357
Bra002882
Brassica rapa
Bra002882
I
0.357
Cagra.0096s0075
Capsella grandiflora
Cagra.0096s0075
I
0.353
Carubv10021131m.g
Capsella rubella
Carubv10021131m.g
I
0.353
Al_scaffold_0003_3814
Arabidopsis lyrata
Al_scaffold_0003_3814
I
0.349
Bra030021
Brassica rapa
Bra030021
I
0.348
Bostr.26959s0010
Boechera stricta
Bostr.26959s0010
I
0.348
Thhalv10003411m.g
Eutrema salsugineum
Thhalv10003411m.g
I
0.346
Thhalv10028026m.g
Eutrema salsugineum
Thhalv10028026m.g
I
0.345
Thhalv10012073m.g
Eutrema salsugineum
Thhalv10012073m.g
I
0.343
Carubv10014950m.g
Capsella rubella
Carubv10014950m.g
N
0.340
Cagra.2516s0029
Capsella grandiflora
Cagra.2516s0029
N
0.334
Cagra.13025s0006
Capsella grandiflora
Cagra.13025s0006
I
0.334
Gorai.007G053900
Gossypium raimondii
Gorai.007G053900
I
0.330
AT1G77570
Arabidopsis thaliana
AT1G77570
I
0.327
scaffold_702873.1
Arabidopsis lyrata
scaffold_702873.1
I
0.326
Bra013406
Brassica rapa
Bra013406
I
0.326
Bostr.3359s0057
Boechera stricta
Bostr.3359s0057
I
0.325
SMU15027452
Schmidtea mediterranea
SMU15027452
I
0.323
orange1.1g015635m.g
Citrus sinensis
orange1.1g015635m.g
I
0.322
VIT_10s0003g01770
Vitis vinifera
VIT_10s0003g01770
I
0.319