POPTR_0009s05050 (Populus trichocarpa)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 POPTR_0009s05050 T255847_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0009s05050.1 MADS box 16 63

Links

Other MADS box family TFs
Other Populus trichocarpa TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.1613s0060 Salix purpurea SapurV1A.1613s0060 N 0.812
SapurV1A.0619s0200 Salix purpurea SapurV1A.0619s0200 N 0.812
cassava39120.m1 Manihot esculenta cassava39120.m1 N 0.812
29693.m002041 Ricinus communis 29693.m002041 N 0.812
SapurV1A.2714s0010 Salix purpurea SapurV1A.2714s0010 N 0.812
orange1.1g044532m.g Citrus sinensis orange1.1g044532m.g N 0.792
Ciclev10006530m.g Citrus clementina Ciclev10006530m.g N 0.792
POPTR_0001s25850 Populus trichocarpa POPTR_0001s25850 N 0.792
cassava9834.m1 Manihot esculenta cassava9834.m1 N 0.792
cassava9826.m1 Manihot esculenta cassava9826.m1 N 0.792
29693.m002042 Ricinus communis 29693.m002042 N 0.792
POPTR_0004s13590 Populus trichocarpa POPTR_0004s13590 N 0.792
Cucsa.047600 Cucumis sativus Cucsa.047600 N 0.771
Cla009921 Citrullus lanatus Cla009921 N 0.771
Ciclev10007104m.g Citrus clementina Ciclev10007104m.g N 0.750
Ciclev10006957m.g Citrus clementina Ciclev10006957m.g N 0.750
Gorai.012G147900 Gossypium raimondii Gorai.012G147900 N 0.729
Ciclev10006503m.g Citrus clementina Ciclev10006503m.g N 0.729
cassava46357.m1 Manihot esculenta cassava46357.m1 N 0.729
Ciclev10006958m.g Citrus clementina Ciclev10006958m.g N 0.729
Ciclev10006439m.g Citrus clementina Ciclev10006439m.g N 0.708
PRUPE_ppa021886mg Prunus persica PRUPE_ppa021886mg N 0.708
Ciclev10006708m.g Citrus clementina Ciclev10006708m.g N 0.708
Gorai.012G148000 Gossypium raimondii Gorai.012G148000 N 0.708
Gorai.009G284300 Gossypium raimondii Gorai.009G284300 N 0.708