Ciclev10006530m.g (Citrus clementina)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Ciclev10006530m.g T257861_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10006530m MADS box 16 63

Links

Other MADS box family TFs
Other Citrus clementina TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g044532m.g Citrus sinensis orange1.1g044532m.g N 1.000
Ciclev10006957m.g Citrus clementina Ciclev10006957m.g N 0.958
Ciclev10006439m.g Citrus clementina Ciclev10006439m.g N 0.917
POPTR_0001s25850 Populus trichocarpa POPTR_0001s25850 N 0.854
Ciclev10007104m.g Citrus clementina Ciclev10007104m.g N 0.854
orange1.1g039494m.g Citrus sinensis orange1.1g039494m.g N 0.854
Ciclev10006405m.g Citrus clementina Ciclev10006405m.g N 0.854
Ciclev10006588m.g Citrus clementina Ciclev10006588m.g N 0.837
Ciclev10006958m.g Citrus clementina Ciclev10006958m.g N 0.833
Ciclev10006503m.g Citrus clementina Ciclev10006503m.g N 0.833
Ciclev10006559m.g Citrus clementina Ciclev10006559m.g N 0.833
Ciclev10006587m.g Citrus clementina Ciclev10006587m.g N 0.833
29693.m002041 Ricinus communis 29693.m002041 N 0.833
Ciclev10007090m.g Citrus clementina Ciclev10007090m.g N 0.833
POPTR_0004s13590 Populus trichocarpa POPTR_0004s13590 N 0.833
orange1.1g040485m.g Citrus sinensis orange1.1g040485m.g N 0.833
29693.m002042 Ricinus communis 29693.m002042 N 0.812
cassava39120.m1 Manihot esculenta cassava39120.m1 N 0.812
cassava9834.m1 Manihot esculenta cassava9834.m1 N 0.812
orange1.1g047467m.g Citrus sinensis orange1.1g047467m.g N 0.812
Ciclev10007015m.g Citrus clementina Ciclev10007015m.g N 0.812
POPTR_0009s05050 Populus trichocarpa POPTR_0009s05050 N 0.792
Ciclev10006708m.g Citrus clementina Ciclev10006708m.g N 0.792
cassava9826.m1 Manihot esculenta cassava9826.m1 N 0.792
orange1.1g038327m.g Citrus sinensis orange1.1g038327m.g N 0.778
Ciclev10006500m.g Citrus clementina Ciclev10006500m.g N 0.771
Ciclev10007010m.g Citrus clementina Ciclev10007010m.g N 0.771
SapurV1A.0619s0200 Salix purpurea SapurV1A.0619s0200 N 0.771
SapurV1A.2714s0010 Salix purpurea SapurV1A.2714s0010 N 0.771
SapurV1A.1613s0060 Salix purpurea SapurV1A.1613s0060 N 0.771
orange1.1g048697m.g Citrus sinensis orange1.1g048697m.g N 0.756
Ciclev10006022m.g Citrus clementina Ciclev10006022m.g N 0.756
Cucsa.047600 Cucumis sativus Cucsa.047600 N 0.750
Cla009921 Citrullus lanatus Cla009921 N 0.750
Ciclev10006740m.g Citrus clementina Ciclev10006740m.g N 0.750
Eucgr.E02870 Eucalyptus grandis Eucgr.E02870 N 0.750
Ciclev10006615m.g Citrus clementina Ciclev10006615m.g N 0.750
Ciclev10006803m.g Citrus clementina Ciclev10006803m.g N 0.750
cassava46357.m1 Manihot esculenta cassava46357.m1 N 0.729
Eucgr.E02872 Eucalyptus grandis Eucgr.E02872 N 0.729
Eucgr.L01236 Eucalyptus grandis Eucgr.L01236 N 0.729
Ciclev10006743m.g Citrus clementina Ciclev10006743m.g N 0.708
Pm008734 Prunus mume Pm008734 N 0.708
PRUPE_ppa024983mg Prunus persica PRUPE_ppa024983mg N 0.708
PRUPE_ppa021886mg Prunus persica PRUPE_ppa021886mg N 0.708
Ciclev10006546m.g Citrus clementina Ciclev10006546m.g N 0.700