orange1.1g047467m.g (Citrus sinensis)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 orange1.1g047467m.g T258841_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g047467m MADS box 13 60

Links

Other MADS box family TFs
Other Citrus sinensis TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10007015m.g Citrus clementina Ciclev10007015m.g N 1.000
Ciclev10006587m.g Citrus clementina Ciclev10006587m.g N 0.967
Ciclev10006957m.g Citrus clementina Ciclev10006957m.g N 0.833
Ciclev10006439m.g Citrus clementina Ciclev10006439m.g N 0.812
orange1.1g040485m.g Citrus sinensis orange1.1g040485m.g N 0.812
Ciclev10006530m.g Citrus clementina Ciclev10006530m.g N 0.812
orange1.1g044532m.g Citrus sinensis orange1.1g044532m.g N 0.812
Ciclev10006022m.g Citrus clementina Ciclev10006022m.g N 0.800
orange1.1g048697m.g Citrus sinensis orange1.1g048697m.g N 0.800
Ciclev10007090m.g Citrus clementina Ciclev10007090m.g N 0.792
Ciclev10006559m.g Citrus clementina Ciclev10006559m.g N 0.792
Ciclev10007104m.g Citrus clementina Ciclev10007104m.g N 0.771
Ciclev10006958m.g Citrus clementina Ciclev10006958m.g N 0.750
Ciclev10006503m.g Citrus clementina Ciclev10006503m.g N 0.750
Ciclev10006615m.g Citrus clementina Ciclev10006615m.g N 0.750
Ciclev10006405m.g Citrus clementina Ciclev10006405m.g N 0.729
cassava39120.m1 Manihot esculenta cassava39120.m1 N 0.729
Ciclev10006500m.g Citrus clementina Ciclev10006500m.g N 0.729
29693.m002041 Ricinus communis 29693.m002041 N 0.729
cassava9834.m1 Manihot esculenta cassava9834.m1 N 0.729
orange1.1g039494m.g Citrus sinensis orange1.1g039494m.g N 0.729
cassava9826.m1 Manihot esculenta cassava9826.m1 N 0.729
Ciclev10006588m.g Citrus clementina Ciclev10006588m.g N 0.721
POPTR_0004s13590 Populus trichocarpa POPTR_0004s13590 N 0.708
Eucgr.L01236 Eucalyptus grandis Eucgr.L01236 N 0.708
Cla009921 Citrullus lanatus Cla009921 N 0.708
Eucgr.E02872 Eucalyptus grandis Eucgr.E02872 N 0.708
PRUPE_ppa024983mg Prunus persica PRUPE_ppa024983mg N 0.708
Ciclev10006803m.g Citrus clementina Ciclev10006803m.g N 0.708
Cucsa.047600 Cucumis sativus Cucsa.047600 N 0.708
POPTR_0001s25850 Populus trichocarpa POPTR_0001s25850 N 0.708
Ciclev10006708m.g Citrus clementina Ciclev10006708m.g N 0.708
Ciclev10006740m.g Citrus clementina Ciclev10006740m.g N 0.708
Pm008734 Prunus mume Pm008734 N 0.708