Ciclev10006439m.g (Citrus clementina)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Ciclev10006439m.g T257857_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10006439m MADS box 16 63

Links

Other MADS box family TFs
Other Citrus clementina TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10006957m.g Citrus clementina Ciclev10006957m.g N 0.958
Ciclev10006530m.g Citrus clementina Ciclev10006530m.g N 0.917
orange1.1g044532m.g Citrus sinensis orange1.1g044532m.g N 0.917
Ciclev10006559m.g Citrus clementina Ciclev10006559m.g N 0.833
Ciclev10007090m.g Citrus clementina Ciclev10007090m.g N 0.833
Ciclev10006588m.g Citrus clementina Ciclev10006588m.g N 0.814
orange1.1g039494m.g Citrus sinensis orange1.1g039494m.g N 0.812
orange1.1g047467m.g Citrus sinensis orange1.1g047467m.g N 0.812
Ciclev10007015m.g Citrus clementina Ciclev10007015m.g N 0.812
Ciclev10006405m.g Citrus clementina Ciclev10006405m.g N 0.812
Ciclev10007104m.g Citrus clementina Ciclev10007104m.g N 0.812
Ciclev10006587m.g Citrus clementina Ciclev10006587m.g N 0.800
orange1.1g040485m.g Citrus sinensis orange1.1g040485m.g N 0.792
29693.m002041 Ricinus communis 29693.m002041 N 0.792
Ciclev10006958m.g Citrus clementina Ciclev10006958m.g N 0.792
Ciclev10006503m.g Citrus clementina Ciclev10006503m.g N 0.792
cassava39120.m1 Manihot esculenta cassava39120.m1 N 0.771
POPTR_0001s25850 Populus trichocarpa POPTR_0001s25850 N 0.771
POPTR_0004s13590 Populus trichocarpa POPTR_0004s13590 N 0.771
cassava9826.m1 Manihot esculenta cassava9826.m1 N 0.750
cassava9834.m1 Manihot esculenta cassava9834.m1 N 0.750
Ciclev10006708m.g Citrus clementina Ciclev10006708m.g N 0.750
Ciclev10007010m.g Citrus clementina Ciclev10007010m.g N 0.729
Ciclev10006615m.g Citrus clementina Ciclev10006615m.g N 0.729
Ciclev10006500m.g Citrus clementina Ciclev10006500m.g N 0.729
29693.m002042 Ricinus communis 29693.m002042 N 0.729
Ciclev10006022m.g Citrus clementina Ciclev10006022m.g N 0.711
orange1.1g048697m.g Citrus sinensis orange1.1g048697m.g N 0.711
SapurV1A.2714s0010 Salix purpurea SapurV1A.2714s0010 N 0.708
SapurV1A.1613s0060 Salix purpurea SapurV1A.1613s0060 N 0.708
SapurV1A.0619s0200 Salix purpurea SapurV1A.0619s0200 N 0.708
Ciclev10006740m.g Citrus clementina Ciclev10006740m.g N 0.708
Cucsa.047600 Cucumis sativus Cucsa.047600 N 0.708
Ciclev10006803m.g Citrus clementina Ciclev10006803m.g N 0.708
Cla009921 Citrullus lanatus Cla009921 N 0.708
POPTR_0009s05050 Populus trichocarpa POPTR_0009s05050 N 0.708