MYB3R-3 (Arabidopsis thaliana)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 AT3G09370 T266427_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB3R5
M07116_2.00 		Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN		 Dap-seq
OMalley et al.(2016)
MYB3R5_col_a 		0.773 0.864
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.673 0.764
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.671 0.771
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT3G09370.1 Myb 78 124
AT3G09370.1 Myb 130 176
AT3G09370.1 Myb 182 227
AT3G09370.2 Myb 83 129
AT3G09370.2 Myb 135 181
AT3G09370.2 Myb 187 232
AT3G09370.3 Myb 91 137
AT3G09370.3 Myb 143 189
AT3G09370.3 Myb 195 240

Links

Other Myb/SANT family TFs
Other Arabidopsis thaliana TFs

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh1_pg.C_scaffold_3000839 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000839 I 0.880
Bostr.22252s0130 Boechera stricta Bostr.22252s0130 I 0.830
Gorai.006G172800 Gossypium raimondii Gorai.006G172800 I 0.830
orange1.1g009402m.g Citrus sinensis orange1.1g009402m.g I 0.822
Ciclev10011452m.g Citrus clementina Ciclev10011452m.g I 0.822
POPTR_0006s08570 Populus trichocarpa POPTR_0006s08570 I 0.818
SapurV1A.0001s1810 Salix purpurea SapurV1A.0001s1810 I 0.816
Pm002704 Prunus mume Pm002704 I 0.815
Gorai.001G249400 Gossypium raimondii Gorai.001G249400 I 0.815
PRUPE_ppa003208mg Prunus persica PRUPE_ppa003208mg I 0.815
Carubv10013377m.g Capsella rubella Carubv10013377m.g I 0.812
Cagra.2515s0028 Capsella grandiflora Cagra.2515s0028 I 0.812
Bra034067 Brassica rapa Bra034067 I 0.810
Bo1g144510 Brassica oleracea Bo1g144510 I 0.810
Traes_3DL_6BBC889A1 Triticum aestivum Traes_3DL_6BBC889A1 I 0.804
Traes_3AL_386795528 Triticum aestivum Traes_3AL_386795528 I 0.804
TRAES3BF104600030CFD_g Triticum aestivum TRAES3BF104600030CFD_g I 0.804
GSMUA_Achr10G26610_001 Musa acuminata GSMUA_Achr10G26610_001 I 0.803
Thhalv10020579m.g Eutrema salsugineum Thhalv10020579m.g I 0.797
Lus10025351.g Linum usitatissimum Lus10025351.g I 0.796
Lus10024394.g Linum usitatissimum Lus10024394.g I 0.796
VIT_08s0007g00360 Vitis vinifera VIT_08s0007g00360 I 0.796
chr1.CM0147.520.nd Lotus japonicus chr1.CM0147.520.nd I 0.795
TCM_021936 Theobroma cacao TCM_021936 I 0.795
GLYMA07G15820 Glycine max GLYMA07G15820 I 0.792
Carubv10000643m.g Capsella rubella Carubv10000643m.g I 0.791
Bostr.6251s0040 Boechera stricta Bostr.6251s0040 I 0.791
Cagra.0487s0012 Capsella grandiflora Cagra.0487s0012 I 0.791
29846.m000184 Ricinus communis 29846.m000184 I 0.790
Thhalv10013211m.g Eutrema salsugineum Thhalv10013211m.g I 0.789
MDP0000219581 Malus domestica MDP0000219581 I 0.784
Eucgr.K03133 Eucalyptus grandis Eucgr.K03133 I 0.782
evm.TU.supercontig_228.17 Carica papaya evm.TU.supercontig_228.17 I 0.782
Bra029762 Brassica rapa Bra029762 I 0.781
Cla018173 Citrullus lanatus Cla018173 I 0.777
Bo5g139340 Brassica oleracea Bo5g139340 I 0.776
GLYMA18G39740 Glycine max GLYMA18G39740 I 0.776
MYB3R5 Arabidopsis thaliana AT5G02320 D 0.773
ATMYB3R5 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6000124 I 0.773
LPERR01G31650 Leersia perrieri LPERR01G31650 I 0.769
BRADI2G54640 Brachypodium distachyon BRADI2G54640 I 0.768
Cucsa.175460 Cucumis sativus Cucsa.175460 I 0.767
cassava12645.valid.m1 Manihot esculenta cassava12645.valid.m1 I 0.767
Pavir.Ea03349 Panicum virgatum Pavir.Ea03349 I 0.764
Pavir.Eb03676 Panicum virgatum Pavir.Eb03676 I 0.764
Si000842m.g Setaria italica Si000842m.g I 0.764
Bra009597 Brassica rapa Bra009597 I 0.763
mgf019610m Mimulus guttatus mgf019610m I 0.760
MTR_7g461410 Medicago truncatula MTR_7g461410 I 0.760
MTR_7g061330 Medicago truncatula MTR_7g061330 I 0.760
PK11664.1 Cannabis sativa PK11664.1 I 0.756
gene18416-v1.0-hybrid Fragaria vesca gene18416-v1.0-hybrid I 0.755
Sb03g039470 Sorghum bicolor Sb03g039470 I 0.750
MYB3R-2 Oryza sativa OS01G0841500 I 0.749
OGLUM01G40780 Oryza glumaepatula OGLUM01G40780 I 0.749
ORGLA01G0306500 Oryza glaberrima ORGLA01G0306500 I 0.749
Bo9g184660 Brassica oleracea Bo9g184660 I 0.747
Aquca_003_00045 Aquilegia coerulea Aquca_003_00045 I 0.746
GRMZM2G081919 Zea mays GRMZM2G081919 I 0.745
AMTR_s00012p00208260 Amborella trichopoda AMTR_s00012p00208260 I 0.743
PGSC0003DMG400008908 Solanum tuberosum PGSC0003DMG400008908 I 0.740
Solyc09g010820.2 Solanum lycopersicum Solyc09g010820.2 I 0.740
GSMUA_Achr6G05030_001 Musa acuminata GSMUA_Achr6G05030_001 I 0.732
GSMUA_Achr7G10520_001 Musa acuminata GSMUA_Achr7G10520_001 I 0.722
GLYMA17G26240 Glycine max GLYMA17G26240 I 0.708
MTR_1g026870 Medicago truncatula MTR_1g026870 I 0.704
gene08793-v1.0-hybrid Fragaria vesca gene08793-v1.0-hybrid I 0.699
PRUPE_ppa000676mg Prunus persica PRUPE_ppa000676mg I 0.697
Ca_14925 Cicer arietinum Ca_14925 I 0.694
OB01G45570 Oryza brachyantha OB01G45570 I 0.694
OPUNC05G16800 Oryza punctata OPUNC05G16800 I 0.693
Pavir.Ea00087 Panicum virgatum Pavir.Ea00087 I 0.693
OLONG_011208 Oryza longistaminata OLONG_011208 I 0.693
Pavir.Eb00149 Panicum virgatum Pavir.Eb00149 I 0.693
Ciclev10007316m.g Citrus clementina Ciclev10007316m.g I 0.691
MDP0000179225 Malus domestica MDP0000179225 I 0.691
Cucsa.311420 Cucumis sativus Cucsa.311420 I 0.689
Solyc08g068320.2 Solanum lycopersicum Solyc08g068320.2 I 0.689
Cla023357 Citrullus lanatus Cla023357 I 0.689
OS12G0238000 Oryza sativa OS12G0238000 I 0.687
OB12G16480 Oryza brachyantha OB12G16480 I 0.687
ORGLA12G0066300 Oryza glaberrima ORGLA12G0066300 I 0.687
MTR_3g110028 Medicago truncatula MTR_3g110028 I 0.687
POPTR_0018s00710 Populus trichocarpa POPTR_0018s00710 I 0.686
VIT_11s0016g03750 Vitis vinifera VIT_11s0016g03750 I 0.683
MDP0000295807 Malus domestica MDP0000295807 I 0.683
Cla022565 Citrullus lanatus Cla022565 I 0.682
SapurV1A.0283s0180 Salix purpurea SapurV1A.0283s0180 I 0.682
Cucsa.161430 Cucumis sativus Cucsa.161430 I 0.682
Eucgr.C02893 Eucalyptus grandis Eucgr.C02893 I 0.682
Traes_1DL_B26A733D4 Triticum aestivum Traes_1DL_B26A733D4 I 0.682
Traes_1BL_C25B5DDB4 Triticum aestivum Traes_1BL_C25B5DDB4 I 0.682
Gorai.009G051000 Gossypium raimondii Gorai.009G051000 I 0.680
TCM_047091 Theobroma cacao TCM_047091 I 0.680
POPTR_0006s25840 Populus trichocarpa POPTR_0006s25840 I 0.680
LjT22I05.60.nd Lotus japonicus LjT22I05.60.nd I 0.679
OBART05G19200 Oryza barthii OBART05G19200 I 0.679
ONIVA05G20060 Oryza nivara ONIVA05G20060 I 0.679
BGIOSGA017917 Oryza indica BGIOSGA017917 I 0.679
ORUFI05G20390 Oryza rufipogon ORUFI05G20390 I 0.679
Bo3g062020 Brassica oleracea Bo3g062020 N 0.677
TRIUR3_29290 Triticum urartu TRIUR3_29290 I 0.676
Pm005124 Prunus mume Pm005124 I 0.676
OB01G18340 Oryza brachyantha OB01G18340 I 0.676
TRAES3BF049800070CFD_g Triticum aestivum TRAES3BF049800070CFD_g I 0.674
Traes_3AS_09025DA2E Triticum aestivum Traes_3AS_09025DA2E I 0.674
Lus10022136.g Linum usitatissimum Lus10022136.g I 0.674
PK12011.1 Cannabis sativa PK12011.1 D 0.673
OGLUM01G09290 Oryza glumaepatula OGLUM01G09290 I 0.672
OBART01G08110 Oryza barthii OBART01G08110 I 0.672
OLONG_011886 Oryza longistaminata OLONG_011886 I 0.672
ONIVA01G10670 Oryza nivara ONIVA01G10670 I 0.672
Q948S5_TOBAC Nicotiana tabacum Q948S5_TOBAC D 0.671
29794.m003447 Ricinus communis 29794.m003447 I 0.667
OPUNC01G07980 Oryza punctata OPUNC01G07980 I 0.666
GSMUA_Achr10G14840_001 Musa acuminata GSMUA_Achr10G14840_001 I 0.666
GSMUA_Achr2G19890_001 Musa acuminata GSMUA_Achr2G19890_001 I 0.666
OPUNC01G08000 Oryza punctata OPUNC01G08000 I 0.666
OMERI01G08160 Oryza meridionalis OMERI01G08160 I 0.665
Gorai.001G028200 Gossypium raimondii Gorai.001G028200 I 0.665
Gorai.010G110000 Gossypium raimondii Gorai.010G110000 I 0.665
evm.TU.supercontig_78.76 Carica papaya evm.TU.supercontig_78.76 I 0.664
Bra011376 Brassica rapa Bra011376 I 0.663
Bo1g010040 Brassica oleracea Bo1g010040 I 0.663
Si021484m.g Setaria italica Si021484m.g I 0.663
Ca_21127 Cicer arietinum Ca_21127 I 0.663
GLYMA06G08660 Glycine max GLYMA06G08660 I 0.662
GLYMA04G08550 Glycine max GLYMA04G08550 I 0.662
Solyc11g071300.1 Solanum lycopersicum Solyc11g071300.1 I 0.661
AMTR_s00109p00061950 Amborella trichopoda AMTR_s00109p00061950 I 0.661