GSMUA_Achr10G14840_001 (Musa acuminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GSMUA_Achr10G14840_001 T272245_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.747 0.863
MYB3R4
M07125_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R4_col_a 		0.735 0.806
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.712 0.813
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.712 0.813
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.691 0.842
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr10P14840_001 Myb 41 87
GSMUA_Achr10P14840_001 Myb 93 139
GSMUA_Achr10P14840_001 Myb 145 189

Links

Other Myb/SANT family TFs
Other Musa acuminata TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr2G19890_001 Musa acuminata GSMUA_Achr2G19890_001 I 0.857
gene08793-v1.0-hybrid Fragaria vesca gene08793-v1.0-hybrid I 0.806
POPTR_0018s00710 Populus trichocarpa POPTR_0018s00710 I 0.794
POPTR_0006s25840 Populus trichocarpa POPTR_0006s25840 I 0.794
Cucsa.161430 Cucumis sativus Cucsa.161430 I 0.792
Cla022565 Citrullus lanatus Cla022565 I 0.792
Eucgr.C02893 Eucalyptus grandis Eucgr.C02893 I 0.792
SapurV1A.0283s0180 Salix purpurea SapurV1A.0283s0180 I 0.792
VIT_11s0016g03750 Vitis vinifera VIT_11s0016g03750 I 0.789
MLOC_10556 Hordeum vulgare MLOC_10556 I 0.787
Pavir.Eb00149 Panicum virgatum Pavir.Eb00149 I 0.785
Pavir.Ea00087 Panicum virgatum Pavir.Ea00087 I 0.785
Lus10022136.g Linum usitatissimum Lus10022136.g I 0.784
Ciclev10007316m.g Citrus clementina Ciclev10007316m.g I 0.783
LjT22I05.60.nd Lotus japonicus LjT22I05.60.nd I 0.781
OB12G16480 Oryza brachyantha OB12G16480 I 0.779
ORGLA12G0066300 Oryza glaberrima ORGLA12G0066300 I 0.779
evm.TU.supercontig_78.76 Carica papaya evm.TU.supercontig_78.76 I 0.778
TCM_047091 Theobroma cacao TCM_047091 I 0.778
Gorai.009G051000 Gossypium raimondii Gorai.009G051000 I 0.775
OS12G0238000 Oryza sativa OS12G0238000 I 0.773
Cucsa.311420 Cucumis sativus Cucsa.311420 I 0.771
Cla023357 Citrullus lanatus Cla023357 I 0.771
Gorai.010G110000 Gossypium raimondii Gorai.010G110000 I 0.769
PRUPE_ppa000676mg Prunus persica PRUPE_ppa000676mg I 0.768
OB01G18340 Oryza brachyantha OB01G18340 I 0.767
29794.m003447 Ricinus communis 29794.m003447 I 0.765
Traes_1AS_61D017632 Triticum aestivum Traes_1AS_61D017632 I 0.765
OBART01G08110 Oryza barthii OBART01G08110 I 0.764
OGLUM01G09290 Oryza glumaepatula OGLUM01G09290 I 0.764
SapurV1A.0446s0220 Salix purpurea SapurV1A.0446s0220 I 0.764
ONIVA01G10670 Oryza nivara ONIVA01G10670 I 0.764
OLONG_011886 Oryza longistaminata OLONG_011886 I 0.764
Traes_1BS_403DBC53C Triticum aestivum Traes_1BS_403DBC53C I 0.762
MTR_3g110028 Medicago truncatula MTR_3g110028 I 0.761
Pavir.J07395 Panicum virgatum Pavir.J07395 I 0.760
Traes_3AS_09025DA2E Triticum aestivum Traes_3AS_09025DA2E I 0.759
TRAES3BF049800070CFD_g Triticum aestivum TRAES3BF049800070CFD_g I 0.759
OPUNC01G07980 Oryza punctata OPUNC01G07980 I 0.756
OPUNC01G08000 Oryza punctata OPUNC01G08000 I 0.756
ORGLA01G0073200 Oryza glaberrima ORGLA01G0073200 I 0.755
mgf008601m Mimulus guttatus mgf008601m I 0.753
VIT_04s0008g03780 Vitis vinifera VIT_04s0008g03780 I 0.751
F775_05724 Aegilops tauschii F775_05724 I 0.751
Pm005124 Prunus mume Pm005124 I 0.749
MTR_1g026870 Medicago truncatula MTR_1g026870 I 0.747
Q948S5_TOBAC Nicotiana tabacum Q948S5_TOBAC D 0.747
MDP0000179225 Malus domestica MDP0000179225 I 0.746
GLYMA14G21523 Glycine max GLYMA14G21523 I 0.742
GLYMA04G08550 Glycine max GLYMA04G08550 I 0.740
GLYMA06G08660 Glycine max GLYMA06G08660 I 0.740
MDP0000295807 Malus domestica MDP0000295807 I 0.738
MYB3R-4 Arabidopsis lyrata fgenesh2_kg.6__1121__AT5G11510.1 I 0.735
Solyc08g068320.2 Solanum lycopersicum Solyc08g068320.2 I 0.735
Bo9g171130 Brassica oleracea Bo9g171130 I 0.735
Bostr.20055s0087 Boechera stricta Bostr.20055s0087 I 0.735
Bra008956 Brassica rapa Bra008956 I 0.735
MYB3R4 Arabidopsis thaliana AT5G11510 D 0.735
OMERI01G08160 Oryza meridionalis OMERI01G08160 I 0.734
Aquca_001_00435 Aquilegia coerulea Aquca_001_00435 I 0.731
Ca_14925 Cicer arietinum Ca_14925 I 0.731
TRIUR3_24658 Triticum urartu TRIUR3_24658 I 0.730
Bo7g115810 Brassica oleracea Bo7g115810 I 0.727
Ca_01884 Cicer arietinum Ca_01884 I 0.727
Cagra.7526s0003 Capsella grandiflora Cagra.7526s0003 I 0.719
Carubv10000155m.g Capsella rubella Carubv10000155m.g I 0.719
BRADI2G31887 Brachypodium distachyon BRADI2G31887 I 0.717
GLYMA17G26240 Glycine max GLYMA17G26240 I 0.717
Gorai.001G028200 Gossypium raimondii Gorai.001G028200 I 0.716
Bostr.7867s1124 Boechera stricta Bostr.7867s1124 I 0.712
PC-MYB1 Arabidopsis lyrata fgenesh2_kg.7__866__AT4G32730.2 I 0.712
PC-MYB1 Arabidopsis thaliana AT4G32730 D 0.712
PK22174.1 Cannabis sativa PK22174.1 I 0.710
MTR_7g461410 Medicago truncatula MTR_7g461410 I 0.709
MTR_7g061330 Medicago truncatula MTR_7g061330 I 0.709
Bra011376 Brassica rapa Bra011376 I 0.708
Bo1g010040 Brassica oleracea Bo1g010040 I 0.708
Bra034531 Brassica rapa Bra034531 I 0.707
Bo3g171130 Brassica oleracea Bo3g171130 I 0.707
Bra037045 Brassica rapa Bra037045 I 0.697
chr1.CM0147.520.nd Lotus japonicus chr1.CM0147.520.nd I 0.696
Thhalv10024320m.g Eutrema salsugineum Thhalv10024320m.g I 0.692
PK12011.1 Cannabis sativa PK12011.1 D 0.691
Bo3g179620 Brassica oleracea Bo3g179620 I 0.689
Thhalv10012583m.g Eutrema salsugineum Thhalv10012583m.g I 0.689
Bo3g007070 Brassica oleracea Bo3g007070 I 0.689
F775_10106 Aegilops tauschii F775_10106 I 0.688
mgf006384m Mimulus guttatus mgf006384m I 0.687
Gorai.006G172800 Gossypium raimondii Gorai.006G172800 I 0.686
Aquca_013_00366 Aquilegia coerulea Aquca_013_00366 I 0.682
Pm002704 Prunus mume Pm002704 I 0.681
PRUPE_ppa003208mg Prunus persica PRUPE_ppa003208mg I 0.681
Thhalv10013211m.g Eutrema salsugineum Thhalv10013211m.g I 0.680
Cagra.0487s0012 Capsella grandiflora Cagra.0487s0012 I 0.680
Carubv10000643m.g Capsella rubella Carubv10000643m.g I 0.680
cassava9078.m1 Manihot esculenta cassava9078.m1 I 0.680
AMTR_s00009p00263240 Amborella trichopoda AMTR_s00009p00263240 I 0.678
GLYMA07G15820 Glycine max GLYMA07G15820 I 0.677
MYB3R-2 Oryza sativa OS01G0841500 I 0.674
SapurV1A.0001s1810 Salix purpurea SapurV1A.0001s1810 I 0.674
ORGLA01G0306500 Oryza glaberrima ORGLA01G0306500 I 0.674
OGLUM01G40780 Oryza glumaepatula OGLUM01G40780 I 0.674
AMTR_s00109p00061950 Amborella trichopoda AMTR_s00109p00061950 I 0.673
Thhalv10020579m.g Eutrema salsugineum Thhalv10020579m.g I 0.673
Bostr.22252s0130 Boechera stricta Bostr.22252s0130 I 0.673
POPTR_0006s08570 Populus trichocarpa POPTR_0006s08570 I 0.672
Sb09g007370 Sorghum bicolor Sb09g007370 N 0.668
Bra006102 Brassica rapa Bra006102 I 0.666
29846.m000184 Ricinus communis 29846.m000184 I 0.666
fgenesh1_pg.C_scaffold_3000839 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000839 I 0.666
MYB3R-3 Arabidopsis thaliana AT3G09370 I 0.666
Ciclev10011452m.g Citrus clementina Ciclev10011452m.g I 0.666
orange1.1g009402m.g Citrus sinensis orange1.1g009402m.g I 0.666
GLYMA18G39740 Glycine max GLYMA18G39740 I 0.661
TCM_021936 Theobroma cacao TCM_021936 I 0.661
Gorai.001G249400 Gossypium raimondii Gorai.001G249400 I 0.661