Pavir.Aa00929 (Panicum virgatum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Pavir.Aa00929 T023776_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Aa00929.1.p B3 78 183
Pavir.Aa00929.2.p B3 78 183

Links

Other B3 family TFs
Other Panicum virgatum TFs

263 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30032.m000462 Ricinus communis 30032.m000462 N 0.703
30068.m002615 Ricinus communis 30068.m002615 I 0.772
30076.m004471 Ricinus communis 30076.m004471 I 0.812
AMTR_s00018p00040300 Amborella trichopoda AMTR_s00018p00040300 N 0.733
AMTR_s00114p00142630 Amborella trichopoda AMTR_s00114p00142630 I 0.743
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.812
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.723
NGA3 Arabidopsis thaliana AT1G01030 N 0.733
ARF31 Arabidopsis thaliana AT2G36080 N 0.713
NGA1 Arabidopsis thaliana AT2G46870 N 0.762
AT3G11580 Arabidopsis thaliana AT3G11580 N 0.723
NGA2 Arabidopsis thaliana AT3G61970 N 0.723
AT5G06250 Arabidopsis thaliana AT5G06250 N 0.713
BGIOSGA005835 Oryza indica BGIOSGA005835 N 0.921
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.881
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.881
BGIOSGA028020 Oryza indica BGIOSGA028020 N 0.708
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.782
Bo01079s020 Brassica oleracea Bo01079s020 N 0.703
Bo3g001110 Brassica oleracea Bo3g001110 N 0.713
Bo3g039420 Brassica oleracea Bo3g039420 N 0.772
Bo4g006900 Brassica oleracea Bo4g006900 N 0.782
Bo4g035110 Brassica oleracea Bo4g035110 N 0.703
Bo4g099000 Brassica oleracea Bo4g099000 N 0.733
Bo4g197410 Brassica oleracea Bo4g197410 I 0.762
Bo5g002790 Brassica oleracea Bo5g002790 N 0.733
Bo6g079210 Brassica oleracea Bo6g079210 N 0.743
Bo8g097490 Brassica oleracea Bo8g097490 N 0.733
Bo9g176470 Brassica oleracea Bo9g176470 N 0.713
Bostr.13129s0349 Boechera stricta Bostr.13129s0349 N 0.713
Bostr.13158s0202 Boechera stricta Bostr.13158s0202 N 0.733
Bostr.19424s1090 Boechera stricta Bostr.19424s1090 N 0.723
Bostr.23794s0488 Boechera stricta Bostr.23794s0488 N 0.703
Bostr.25993s0080 Boechera stricta Bostr.25993s0080 N 0.772
Bostr.5325s0023 Boechera stricta Bostr.5325s0023 N 0.733
Bra000434 Brassica rapa Bra000434 N 0.762
Bra003482 Brassica rapa Bra003482 N 0.723
Bra004501 Brassica rapa Bra004501 N 0.792
Bra005301 Brassica rapa Bra005301 N 0.703
Bra007646 Brassica rapa Bra007646 N 0.733
Bra014415 Brassica rapa Bra014415 N 0.743
Bra017262 Brassica rapa Bra017262 N 0.703
Bra030497 Brassica rapa Bra030497 N 0.723
Bra033294 Brassica rapa Bra033294 N 0.713
Bra034828 Brassica rapa Bra034828 N 0.703
Bra040478 Brassica rapa Bra040478 I 0.782
BRADI1G77150 Brachypodium distachyon BRADI1G77150 N 0.802
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.891
Cagra.0050s0013 Capsella grandiflora Cagra.0050s0013 N 0.762
Cagra.0483s0046 Capsella grandiflora Cagra.0483s0046 I 0.723
Cagra.0993s0119 Capsella grandiflora Cagra.0993s0119 N 0.713
Cagra.1655s0012 Capsella grandiflora Cagra.1655s0012 N 0.713
Cagra.1968s0048 Capsella grandiflora Cagra.1968s0048 N 0.733
Cagra.2117s0038 Capsella grandiflora Cagra.2117s0038 I 0.703
Carubv10001689m.g Capsella rubella Carubv10001689m.g I 0.703
Carubv10009540m.g Capsella rubella Carubv10009540m.g N 0.733
Carubv10014376m.g Capsella rubella Carubv10014376m.g N 0.713
Carubv10017696m.g Capsella rubella Carubv10017696m.g I 0.713
Carubv10023656m.g Capsella rubella Carubv10023656m.g N 0.762
Carubv10023925m.g Capsella rubella Carubv10023925m.g N 0.713
cassava19218.valid.m1 Manihot esculenta cassava19218.valid.m1 N 0.713
cassava29779.valid.m1 Manihot esculenta cassava29779.valid.m1 I 0.802
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.812
cassava39049.m1 Manihot esculenta cassava39049.m1 I 0.752
cassava3990.m1 Manihot esculenta cassava3990.m1 N 0.703
Ca_01368 Cicer arietinum Ca_01368 I 0.812
Ca_25633 Cicer arietinum Ca_25633 I 0.713
chr1.CM0105.800.nc Lotus japonicus chr1.CM0105.800.nc I 0.802
Ciclev10012008m.g Citrus clementina Ciclev10012008m.g I 0.713
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.802
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.802
Cla005055 Citrullus lanatus Cla005055 N 0.733
Cla006845 Citrullus lanatus Cla006845 I 0.752
Cla014858 Citrullus lanatus Cla014858 N 0.798
Cla017937 Citrullus lanatus Cla017937 I 0.752
Cucsa.106780 Cucumis sativus Cucsa.106780 N 0.788
Cucsa.193290 Cucumis sativus Cucsa.193290 I 0.762
Cucsa.241440 Cucumis sativus Cucsa.241440 I 0.743
Cucsa.349830 Cucumis sativus Cucsa.349830 N 0.752
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I 0.772
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.812
evm.TU.contig_29173.1 Carica papaya evm.TU.contig_29173.1 I 0.723
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.802
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.812
F775_04153 Aegilops tauschii F775_04153 N 0.733
fgenesh2_kg.181__3__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.181__3__AT2G46870.1 N 0.762
NGA3 Arabidopsis lyrata fgenesh2_kg.1__134__AT1G01030.1 N 0.733
fgenesh2_kg.4__2914__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.4__2914__AT2G46870.1 N 0.762
NGA2 Arabidopsis lyrata fgenesh2_kg.5__2696__AT3G61970.1 N 0.733
fgenesh2_kg.6__566__AT5G06250.2 Arabidopsis lyrata fgenesh2_kg.6__566__AT5G06250.2 N 0.713
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.802
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I 0.723
gene18594-v1.0-hybrid Fragaria vesca gene18594-v1.0-hybrid I 0.772
GLYMA02G36090 Glycine max GLYMA02G36090 I 0.713
GLYMA03G42301 Glycine max GLYMA03G42301 I 0.802
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.832
GLYMA10G08871 Glycine max GLYMA10G08871 I 0.713
GLYMA16G01951 Glycine max GLYMA16G01951 I 0.842
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.792
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.812
Gorai.002G237900 Gossypium raimondii Gorai.002G237900 I 0.703
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.802
Gorai.004G128200 Gossypium raimondii Gorai.004G128200 N 0.790
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.812
Gorai.008G132400 Gossypium raimondii Gorai.008G132400 I 0.812
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.772
Gorai.009G399000 Gossypium raimondii Gorai.009G399000 N 0.703
GRMZM2G018336 Zea mays GRMZM2G018336 I 0.703
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.891
GRMZM2G024948 Zea mays GRMZM2G024948 N 1.000
GRMZM2G065538 Zea mays GRMZM2G065538 I 0.703
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.832
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.871
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.891
GRMZM2G125095 Zea mays GRMZM2G125095 N 0.743
GRMZM2G142999 Zea mays GRMZM2G142999 N 0.798
GRMZM5G805685 Zea mays GRMZM5G805685 N 0.703
GSMUA_Achr1G03600_001 Musa acuminata GSMUA_Achr1G03600_001 I 0.762
GSMUA_Achr4G26430_001 Musa acuminata GSMUA_Achr4G26430_001 I 0.842
GSMUA_Achr5G20340_001 Musa acuminata GSMUA_Achr5G20340_001 N 0.822
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.822
LPERR02G22870 Leersia perrieri LPERR02G22870 I 0.891
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.851
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.901
LPERR07G08550 Leersia perrieri LPERR07G08550 N 0.720
LPERR10G12990 Leersia perrieri LPERR10G12990 N 0.772
Lus10021326.g Linum usitatissimum Lus10021326.g N 0.703
Lus10034276.g Linum usitatissimum Lus10034276.g I 0.703
MDP0000138163 Malus domestica MDP0000138163 N 0.733
MDP0000229742 Malus domestica MDP0000229742 N 0.703
MDP0000288808 Malus domestica MDP0000288808 N 0.723
mgf018965m Mimulus guttatus mgf018965m N 0.703
mgf019085m Mimulus guttatus mgf019085m N 0.713
mgf023769m Mimulus guttatus mgf023769m N 0.792
MLOC_38822 Hordeum vulgare MLOC_38822 I 0.713
MLOC_44012 Hordeum vulgare MLOC_44012 I 0.704
MLOC_47091 Hordeum vulgare MLOC_47091 N 0.723
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.931
MLOC_74058 Hordeum vulgare MLOC_74058 N 0.762
MTR_1g058350 Medicago truncatula MTR_1g058350 N 0.733
MTR_7g105370 Medicago truncatula MTR_7g105370 N 0.703
MTR_7g117455 Medicago truncatula MTR_7g117455 I 0.822
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.822
OB02G35380 Oryza brachyantha OB02G35380 I 0.921
OB03G11610 Oryza brachyantha OB03G11610 N 0.871
OB05G32250 Oryza brachyantha OB05G32250 I 0.733
OB10G24100 Oryza brachyantha OB10G24100 N 0.731
OB12G13420 Oryza brachyantha OB12G13420 N 0.703
OBART02G28100 Oryza barthii OBART02G28100 N 0.921
OBART03G01650 Oryza barthii OBART03G01650 N 0.881
OBART04G22880 Oryza barthii OBART04G22880 I 0.891
OBART10G17010 Oryza barthii OBART10G17010 N 0.782
OGLUM02G28660 Oryza glumaepatula OGLUM02G28660 N 0.921
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.881
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.891
OGLUM08G03520 Oryza glumaepatula OGLUM08G03520 N 0.708
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.782
OLONG_000415 Oryza longistaminata OLONG_000415 I 0.732
OMERI02G27240 Oryza meridionalis OMERI02G27240 N 0.921
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.881
OMERI10G13480 Oryza meridionalis OMERI10G13480 N 0.782
OMERI12G01740 Oryza meridionalis OMERI12G01740 N 0.713
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.881
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.881
ONIVA08G03420 Oryza nivara ONIVA08G03420 N 0.708
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.782
ONIVA12G15340 Oryza nivara ONIVA12G15340 N 0.921
OPUNC02G25780 Oryza punctata OPUNC02G25780 N 0.921
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.881
OPUNC07G09160 Oryza punctata OPUNC07G09160 N 0.743
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.782
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.802
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.802
orange1.1g019261m.g Citrus sinensis orange1.1g019261m.g I 0.713
ORGLA02G0241100 Oryza glaberrima ORGLA02G0241100 N 0.921
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.881
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.891
ORGLA08G0028800 Oryza glaberrima ORGLA08G0028800 N 0.708
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.782
ORUFI02G29620 Oryza rufipogon ORUFI02G29620 N 0.921
ORUFI04G24570 Oryza rufipogon ORUFI04G24570 I 0.782
ORUFI08G03850 Oryza rufipogon ORUFI08G03850 N 0.708
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.782
OS02G0683500 Oryza sativa OS02G0683500 N 0.921
OS03G0120900 Oryza sativa OS03G0120900 N 0.881
OS04G0581400 Oryza sativa OS04G0581400 I 0.891
OS08G0157700 Oryza sativa OS08G0157700 N 0.708
OS10G0537100 Oryza sativa OS10G0537100 N 0.782
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I 0.921
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N 0.703
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N 0.703
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.911
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.881
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.881
Pavir.J06582 Panicum virgatum Pavir.J06582 N 0.802
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.863
Pavir.J35382 Panicum virgatum Pavir.J35382 N 0.792
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.911
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I 0.792
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I 0.792
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.743
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.812
PK04952.1 Cannabis sativa PK04952.1 I 0.723
PK11025.1 Cannabis sativa PK11025.1 I 0.802
PK21157.1 Cannabis sativa PK21157.1 I 0.772
Pm024248 Prunus mume Pm024248 I 0.812
Pm028725 Prunus mume Pm028725 N 0.743
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I 0.782
POPTR_0002s18260 Populus trichocarpa POPTR_0002s18260 N 0.812
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.792
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I 0.822
POPTR_0016s07540 Populus trichocarpa POPTR_0016s07540 N 0.713
PRUPE_ppa015999mg Prunus persica PRUPE_ppa015999mg N 0.733
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.812
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I 0.727
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.822
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I 0.822
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I 0.792
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N 0.723
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N 0.723
Sb01g030520 Sorghum bicolor Sb01g030520 N 0.776
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.881
Sb04g031710 Sorghum bicolor Sb04g031710 N 1.000
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.911
scaffold_301330.1 Arabidopsis lyrata scaffold_301330.1 N 0.723
scaffold_402221.1 Arabidopsis lyrata scaffold_402221.1 N 0.713
Si011823m.g Setaria italica Si011823m.g N 0.901
Si020241m.g Setaria italica Si020241m.g N 0.911
Si036864m.g Setaria italica Si036864m.g N 0.891
Si039972m.g Setaria italica Si039972m.g N 0.772
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.802
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.792
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.822
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.743
TCM_005014 Theobroma cacao TCM_005014 I 0.812
TCM_015590 Theobroma cacao TCM_015590 I 0.802
TCM_022729 Theobroma cacao TCM_022729 N 0.727
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N 0.772
Thhalv10006123m.g Eutrema salsugineum Thhalv10006123m.g I 0.733
Thhalv10008068m.g Eutrema salsugineum Thhalv10008068m.g N 0.733
Thhalv10015675m.g Eutrema salsugineum Thhalv10015675m.g I 0.703
Thhalv10017156m.g Eutrema salsugineum Thhalv10017156m.g N 0.713
Thhalv10021305m.g Eutrema salsugineum Thhalv10021305m.g N 0.713
Traes_1AL_29F610E15 Triticum aestivum Traes_1AL_29F610E15 N 0.743
Traes_1BL_60A56C455 Triticum aestivum Traes_1BL_60A56C455 I 0.713
Traes_1BL_B8B4C1FB6 Triticum aestivum Traes_1BL_B8B4C1FB6 I 0.713
Traes_1BL_F14523046 Triticum aestivum Traes_1BL_F14523046 I 0.713
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.899
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.901
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.893
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.842
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.861
Traes_4DL_D0F3E9568 Triticum aestivum Traes_4DL_D0F3E9568 N 0.822
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.931
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.931
TRIUR3_01515 Triticum urartu TRIUR3_01515 N 0.723
TRIUR3_06598 Triticum urartu TRIUR3_06598 N 0.762
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.743
TRIUR3_29732 Triticum urartu TRIUR3_29732 N 0.812
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.812
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.733
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.782