29692.m000540 (Ricinus communis)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 29692.m000540 T202008_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
29692.m000540 GRAS 240 599

Links

Other GRAS family TFs
Other Ricinus communis TFs

95 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28677.m000055 Ricinus communis 28677.m000055 N 0.793
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N 0.796
Aquca_002_01300 Aquilegia coerulea Aquca_002_01300 N 0.728
Aquca_091_00032 Aquilegia coerulea Aquca_091_00032 N 0.759
GAI Arabidopsis thaliana AT1G14920 N 0.838
RGA Arabidopsis thaliana AT2G01570 N 0.852
SLR1 Oryza indica BGIOSGA013420 N 0.715
Bo2g052880 Brassica oleracea Bo2g052880 N 0.700
Bo7g078550 Brassica oleracea Bo7g078550 N 0.855
Bo9g070200 Brassica oleracea Bo9g070200 N 0.761
Bostr.7128s0107 Boechera stricta Bostr.7128s0107 N 0.835
Bostr.7903s0021 Boechera stricta Bostr.7903s0021 N 0.871
Bra017443 Brassica rapa Bra017443 N 0.748
Bra024875 Brassica rapa Bra024875 N 0.858
BRADI1G11090 Brachypodium distachyon BRADI1G11090 N 0.717
Cagra.2235s0013 Capsella grandiflora Cagra.2235s0013 N 0.863
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N 0.835
Carubv10008833m.g Capsella rubella Carubv10008833m.g N 0.835
Carubv10018534m.g Capsella rubella Carubv10018534m.g N 0.844
Carubv10020171m.g Capsella rubella Carubv10020171m.g N 0.707
cassava14484.m1 Manihot esculenta cassava14484.m1 N 0.944
cassava15077.m1 Manihot esculenta cassava15077.m1 N 0.958
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.808
Ca_05046 Cicer arietinum Ca_05046 N 0.835
Ca_13295 Cicer arietinum Ca_13295 I 0.759
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N 0.803
Ciclev10017466m.g Citrus clementina Ciclev10017466m.g N 0.830
Cla003996 Citrullus lanatus Cla003996 N 0.874
Cla020062 Citrullus lanatus Cla020062 N 0.782
Cucsa.006260 Cucumis sativus Cucsa.006260 N 0.765
Cucsa.280310 Cucumis sativus Cucsa.280310 N 0.874
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N 0.860
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.781
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.784
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I 0.913
F775_03572 Aegilops tauschii F775_03572 N 0.769
GAI Arabidopsis lyrata fgenesh2_kg.1__1634__AT1G14920.1 N 0.838
RGA1 Arabidopsis lyrata fgenesh2_kg.5__65__AT2G01570.1 N 0.852
GLYMA05G27190 Glycine max GLYMA05G27190 N 0.829
GLYMA08G10140 Glycine max GLYMA08G10140 N 0.825
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.776
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.787
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.783
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N 0.908
GRMZM2G024973 Zea mays GRMZM2G024973 N 0.714
GRMZM2G144744 Zea mays GRMZM2G144744 N 0.733
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N 0.777
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N 0.777
LPERR03G26000 Leersia perrieri LPERR03G26000 N 0.723
Lus10017626.g Linum usitatissimum Lus10017626.g N 0.770
Lus10033583.g Linum usitatissimum Lus10033583.g N 0.765
MDP0000237978 Malus domestica MDP0000237978 N 0.840
MDP0000669451 Malus domestica MDP0000669451 I 0.821
mgf008289m Mimulus guttatus mgf008289m N 0.825
mgf025772m Mimulus guttatus mgf025772m N 0.753
MLOC_67940 Hordeum vulgare MLOC_67940 N 0.720
MTR_3g065980 Medicago truncatula MTR_3g065980 N 0.777
OB03G38380 Oryza brachyantha OB03G38380 N 0.710
OBART03G31370 Oryza barthii OBART03G31370 N 0.715
OGLUM03G31610 Oryza glumaepatula OGLUM03G31610 N 0.715
OMERI03G27970 Oryza meridionalis OMERI03G27970 N 0.715
ONIVA03G32670 Oryza nivara ONIVA03G32670 N 0.715
OPUNC03G28530 Oryza punctata OPUNC03G28530 N 0.715
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N 0.803
orange1.1g043131m.g Citrus sinensis orange1.1g043131m.g N 0.835
ORGLA03G0290200 Oryza glaberrima ORGLA03G0290200 N 0.715
ORUFI03G32650 Oryza rufipogon ORUFI03G32650 N 0.713
SLR1 Oryza sativa OS03G0707600 N 0.725
Pavir.Ia00840 Panicum virgatum Pavir.Ia00840 N 0.737
Pavir.Ib04357 Panicum virgatum Pavir.Ib04357 N 0.737
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N 0.798
PK14700.1 Cannabis sativa PK14700.1 N 0.896
Pm006304 Prunus mume Pm006304 N 0.868
Pm014329 Prunus mume Pm014329 I 0.824
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.807
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.801
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N 0.936
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N 0.933
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.810
PRUPE_ppa005944mg Prunus persica PRUPE_ppa005944mg N 0.863
SapurV1A.0015s0210 Salix purpurea SapurV1A.0015s0210 N 0.918
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N 0.782
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N 0.919
Sb01g010660 Sorghum bicolor Sb01g010660 N 0.723
Si039400m.g Setaria italica Si039400m.g N 0.719
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N 0.796
TCM_010965 Theobroma cacao TCM_010965 N 0.924
TCM_019165 Theobroma cacao TCM_019165 N 0.792
Thhalv10005482m.g Eutrema salsugineum Thhalv10005482m.g N 0.863
Thhalv10007323m.g Eutrema salsugineum Thhalv10007323m.g N 0.829
Thhalv10018436m.g Eutrema salsugineum Thhalv10018436m.g N 0.700
Traes_4BS_2EE4988CD Triticum aestivum Traes_4BS_2EE4988CD N 0.714
Traes_4DS_ADBA6E30A Triticum aestivum Traes_4DS_ADBA6E30A N 0.712
GAI1 Vitis vinifera VIT_01s0011g05260 N 0.891
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.808