Carubv10022129m.g (Capsella rubella)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Carubv10022129m.g T355981_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY24
M07426_2.00 		Arabidopsis thaliana
NNNAWAGTCAACGN
NCGTTGACTWTNNN		 Dap-seq
OMalley et al.(2016)
WRKY24_col_a 		0.879 0.966
WRKY24
M07427_2.00 		Arabidopsis thaliana
NAWAGTCAACGNH
DNCGTTGACTWTN		 Dap-seq
OMalley et al.(2016)
WRKY24_colamp_a 		0.879 0.966
WRKY75
M02562_2.00 		Arabidopsis thaliana
NRGTCAAM
KTTGACYN		 PBM
Weirauch et al.(2014)
pTH8821 		0.857 0.828
WRKY75
M07420_2.00 		Arabidopsis thaliana
NAAAGTCAACGNH
DNCGTTGACTTTN		 Dap-seq
OMalley et al.(2016)
WRKY75_col_a 		0.857 0.828
WRKY75
M07421_2.00 		Arabidopsis thaliana
VAAAGTCAACRNH
DNYGTTGACTTTB		 Dap-seq
OMalley et al.(2016)
WRKY75_colamp_a 		0.857 0.828
WRKY43
M02555_2.00 		Arabidopsis thaliana
NRGTCAAHNN
NNDTTGACYN		 PBM
Weirauch et al.(2014)
pTH7373 		0.848 0.810
WRKY43
M07393_2.00 		Arabidopsis thaliana
NNAAAGTCAACGNN
NNCGTTGACTTTNN		 Dap-seq
OMalley et al.(2016)
WRKY43_col_a 		0.848 0.810
WRKY43
M07394_2.00 		Arabidopsis thaliana
NNNNAAAGTCAACGN
NCGTTGACTTTNNNN		 Dap-seq
OMalley et al.(2016)
WRKY43_colamp_a 		0.848 0.810
WRKY71
M07374_2.00 		Arabidopsis thaliana
HAAAGTCAAMN
NKTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY71_col_a 		0.830 0.724
WRKY48
M02565_2.00 		Arabidopsis thaliana
NNVGTCADNN
NNHTGACBNN		 PBM
Weirauch et al.(2014)
pTH7552 		0.828 0.707
WRKY45
M00899_2.00 		Arabidopsis thaliana
NNRGTCAAMGN
NCKTTGACYNN		 PBM
Franco-Zorrilla et al.(2014)
WRKY45 		0.828 0.724
WRKY45
M07397_2.00 		Arabidopsis thaliana
NAAAAGTCAAMD
HKTTGACTTTTN		 Dap-seq
OMalley et al.(2016)
WRKY45_col_a 		0.828 0.724
WRKY45
M07398_2.00 		Arabidopsis thaliana
MAAAGTCAAMV
BKTTGACTTTK		 Dap-seq
OMalley et al.(2016)
WRKY45_colamp_a 		0.828 0.724
WRKY28
M07406_2.00 		Arabidopsis thaliana
HAAAGTCAAMNNH
DNNKTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY28_col_a 		0.827 0.724
WRKY28
M07407_2.00 		Arabidopsis thaliana
VAAAGTCAAMG
CKTTGACTTTB		 Dap-seq
OMalley et al.(2016)
WRKY28_colamp_a 		0.827 0.724
WRKY8
M02564_2.00 		Arabidopsis thaliana
NRGTCAAHN
NDTTGACYN		 PBM
Weirauch et al.(2014)
pTH7554 		0.827 0.707
WRKY8
M07428_2.00 		Arabidopsis thaliana
NAAAAGTCAACRNHW
WDNYGTTGACTTTTN		 Dap-seq
OMalley et al.(2016)
WRKY8_colamp_a 		0.827 0.707
WRKY8
M07429_2.00 		Arabidopsis thaliana
NNVAAAGTCAACRNH
DNYGTTGACTTTBNN		 Dap-seq
OMalley et al.(2016)
WRKY8_col 		0.827 0.707
WRKY12
M00898_2.00 		Arabidopsis thaliana
NHGGTCAACNN
NNGTTGACCDN		 PBM
Franco-Zorrilla et al.(2014)
WRKY12 		0.825 0.690
fgenesh1_pg.C_Chr_11.0001000193
M02570_2.00 		Ostreococcus tauri
NRGTCARNN
NNYTGACYN		 PBM
Weirauch et al.(2014)
pTH9432 		0.820 0.534
WRKY57
M02547_2.00 		Arabidopsis thaliana
NNRGTCAAHN
NDTTGACYNN		 PBM
Weirauch et al.(2014)
pTH7917 		0.818 0.672
WRKY23
M02556_2.00 		Arabidopsis thaliana
RGTCAACG
CGTTGACY		 PBM
Weirauch et al.(2014)
pTH7387 		0.817 0.707
WRKY23
M01089_2.00 		Arabidopsis thaliana
NRGTCAAM
KTTGACYN		 PBM
Sullivan et al.(2014)
pTH7671 		0.817 0.707
ZAP1
M00982_2.00 		Arabidopsis thaliana
NRGTCAAN
NTTGACYN		 PBM
Lindemose et al.(2014)
WRKY1 		0.816 0.603
PK25870.1
M01325_2.00 		Cannabis sativa
NRGTCAAM
KTTGACYN		 PBM
Lambert et al.(2019)
pTH10156 		0.810 0.621
WRKY51
M02568_2.00 		Arabidopsis thaliana
NNRGTCAANN
NNTTGACYNN		 PBM
Weirauch et al.(2014)
pTH7478 		0.810 0.603
WRKY21
M02553_2.00 		Arabidopsis thaliana
NNRGTCAAMN
NKTTGACYNN		 PBM
Weirauch et al.(2014)
pTH7422 		0.809 0.483
WRKY21
M07389_2.00 		Arabidopsis thaliana
HAAAGTCAACNNH
DNNGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY21_colamp_a 		0.809 0.483
WRKY21
M07390_2.00 		Arabidopsis thaliana
HAAAGTCAACK
MGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY21_col 		0.809 0.483
WRKY38
M00901_2.00 		Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN		 PBM
Franco-Zorrilla et al.(2014)
WRKY38 		0.808 0.517
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10022129m WRKY 113 170

Links

Other WRKY family TFs
Other Capsella rubella TFs

1200 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000956101 Angiostrongylus cantonensis ACAC_0000956101 I
ACOC_0000749401 Angiostrongylus costaricensis ACOC_0000749401 I
ANCCAN_20599 Ancylostoma caninum ANCCAN_20599 I
ANCCAN_22066 Ancylostoma caninum ANCCAN_22066 I
ANCCEY_12461 Ancylostoma ceylanicum ANCCEY_12461 I
ANCDUO_15746 Ancylostoma duodenale ANCDUO_15746 I
ASIM_0001548701 Anisakis simplex ASIM_0001548701 I
ASU_00971 Ascaris suum ASU_00971 I
Bm5457 Brugia malayi Bm5457 I
BTMF_0001565301 Brugia timori BTMF_0001565301 I
BXY_0053200 Bursaphelenchus xylophilus BXY_0053200 I
BXY_0412900 Bursaphelenchus xylophilus BXY_0412900 I
BXY_0816300 Bursaphelenchus xylophilus BXY_0816300 I
BXY_0861500 Bursaphelenchus xylophilus BXY_0861500 I
BXY_1082600 Bursaphelenchus xylophilus BXY_1082600 I
CBG03466 Caenorhabditis briggsae CBG03466 I
CBG03860 Caenorhabditis briggsae CBG03860 I
CBG04240 Caenorhabditis briggsae CBG04240 I
CBG13142 Caenorhabditis briggsae CBG13142 I
CBG14996 Caenorhabditis briggsae CBG14996 I
CBG14997 Caenorhabditis briggsae CBG14997 I
CBG22587 Caenorhabditis briggsae CBG22587 I
CBG22776 Caenorhabditis briggsae CBG22776 I
CBN00088 Caenorhabditis brenneri CBN00088 I
CBN04415 Caenorhabditis brenneri CBN04415 I
CBN05776 Caenorhabditis brenneri CBN05776 I
CBN08474 Caenorhabditis brenneri CBN08474 I
CBN21958 Caenorhabditis brenneri CBN21958 I
CBN28641 Caenorhabditis brenneri CBN28641 I
CBN32300 Caenorhabditis brenneri CBN32300 I
CGOC_0000279901 Cylicostephanus goldi CGOC_0000279901 I
CJA02727 Caenorhabditis japonica CJA02727 I
CJA06107 Caenorhabditis japonica CJA06107 I
CJA14035 Caenorhabditis japonica CJA14035 I
CJA14248 Caenorhabditis japonica CJA14248 I
CJA14611 Caenorhabditis japonica CJA14611 I
CJA18307 Caenorhabditis japonica CJA18307 I
CJA19445 Caenorhabditis japonica CJA19445 I
CJA39530 Caenorhabditis japonica CJA39530 I
CRE07033 Caenorhabditis remanei CRE07033 I
CRE07034 Caenorhabditis remanei CRE07034 I
CRE07035 Caenorhabditis remanei CRE07035 I
CRE08264 Caenorhabditis remanei CRE08264 I
CRE09416 Caenorhabditis remanei CRE09416 I
CRE10779 Caenorhabditis remanei CRE10779 I
CRE21925 Caenorhabditis remanei CRE21925 I
CRE22212 Caenorhabditis remanei CRE22212 I
CRE24933 Caenorhabditis remanei CRE24933 I
CRE26423 Caenorhabditis remanei CRE26423 I
CRE29874 Caenorhabditis remanei CRE29874 I
DICVIV_01644 Dictyocaulus viviparus DICVIV_01644 I
DICVIV_11073 Dictyocaulus viviparus DICVIV_11073 I
EEL_0000265301 Elaeophora elaphi EEL_0000265301 I
EVEC_0000864401 Enterobius vermicularis EVEC_0000864401 I
genemark-nMf.1.1.scaf00584-processed-gene-0.4 Meloidogyne floridensis genemark-nMf.1.1.scaf00584-processed-gene-0.4 I
genemark-nMf.1.1.scaf02603-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf02603-processed-gene-0.3 I
GPLIN_000327200 Globodera pallida GPLIN_000327200 I
Hba_17038 Heterorhabditis bacteriophora Hba_17038 I
Hba_17946 Heterorhabditis bacteriophora Hba_17946 I
HCOI00094500 Haemonchus contortus HCOI00094500 I
HCOI01442000 Haemonchus contortus HCOI01442000 I
HCOI01927800 Haemonchus contortus HCOI01927800 I
HCOI01945300 Haemonchus contortus HCOI01945300 I
HCOI02126500 Haemonchus contortus HCOI02126500 I
HPBE_0001033901 Heligmosomoides bakeri HPBE_0001033901 I
HPBE_0001438801 Heligmosomoides bakeri HPBE_0001438801 I
HPBE_0001524301 Heligmosomoides bakeri HPBE_0001524301 I
HPLM_0000308401 Haemonchus placei HPLM_0000308401 I
HPLM_0001358001 Haemonchus placei HPLM_0001358001 I
L596_g10816 Steinernema carpocapsae L596_g10816 I
L596_g23123 Steinernema carpocapsae L596_g23123 I
L596_g25910 Steinernema carpocapsae L596_g25910 I
L596_g26401 Steinernema carpocapsae L596_g26401 I
L596_g7829 Steinernema carpocapsae L596_g7829 I
L596_g9277 Steinernema carpocapsae L596_g9277 I
L596_g9904 Steinernema carpocapsae L596_g9904 I
L889_g11570 Steinernema feltiae L889_g11570 I
L889_g15424 Steinernema feltiae L889_g15424 I
L889_g16305 Steinernema feltiae L889_g16305 I
L889_g25097 Steinernema feltiae L889_g25097 I
L889_g2977 Steinernema feltiae L889_g2977 I
L889_g31970 Steinernema feltiae L889_g31970 I
L889_g366 Steinernema feltiae L889_g366 I
L892_g17146 Steinernema scapterisci L892_g17146 I
L892_g17832 Steinernema scapterisci L892_g17832 I
L892_g186 Steinernema scapterisci L892_g186 I
L892_g23093 Steinernema scapterisci L892_g23093 I
L892_g3438 Steinernema scapterisci L892_g3438 I
L892_g4134 Steinernema scapterisci L892_g4134 I
L893_g21283 Steinernema glaseri L893_g21283 I
L893_g263 Steinernema glaseri L893_g263 I
L893_g33656 Steinernema glaseri L893_g33656 I
L893_g5404 Steinernema glaseri L893_g5404 I
L893_g6023 Steinernema glaseri L893_g6023 I
L893_g6565 Steinernema glaseri L893_g6565 I
L898_g11608 Steinernema monticolum L898_g11608 I
L898_g18440 Steinernema monticolum L898_g18440 I
L898_g23058 Steinernema monticolum L898_g23058 I
L898_g32368 Steinernema monticolum L898_g32368 I
L898_g5338 Steinernema monticolum L898_g5338 I
L898_g9613 Steinernema monticolum L898_g9613 I
LOAG_07549 Loa loa LOAG_07549 I
MhA1_Contig1031.frz3.gene17 Meloidogyne hapla MhA1_Contig1031.frz3.gene17 N
MhA1_Contig691.frz3.gene13 Meloidogyne hapla MhA1_Contig691.frz3.gene13 I
Minc11307 Meloidogyne incognita Minc11307 I
nAv.1.0.1.g08447 Acanthocheilonema viteae nAv.1.0.1.g08447 I
NBR_0000015501 Nippostrongylus brasiliensis NBR_0000015501 I
nDi.2.2.2.g03974 Dirofilaria immitis nDi.2.2.2.g03974 I
NECAME_02375 Necator americanus NECAME_02375 I
nLs.2.1.2.g04526 Litomosoides sigmodontis nLs.2.1.2.g04526 I
nOo.2.0.1.g02628 Onchocerca ochengi nOo.2.0.1.g02628 I
OESDEN_00859 Oesophagostomum dentatum OESDEN_00859 I
OFLC_0000076301 Onchocerca flexuosa OFLC_0000076301 I
Ppa-nhr-14 Pristionchus pacificus PPA06980 I
PPA14696 Pristionchus pacificus PPA14696 I
Ppa-nhr-61 Pristionchus pacificus PPA27722 I
Ppa-nhr-3 Pristionchus pacificus PPA28597 I
PTRK_0000748600 Parastrongyloides trichosuri PTRK_0000748600 I
PTRK_0000861400 Parastrongyloides trichosuri PTRK_0000861400 I
PTRK_0001236400 Parastrongyloides trichosuri PTRK_0001236400 I
PTRK_0001591500 Parastrongyloides trichosuri PTRK_0001591500 I
RSKR_0000178700 Rhabditophanes kr3021 RSKR_0000178700 I
RSKR_0001171300 Rhabditophanes kr3021 RSKR_0001171300 I
RSKR_0001175400 Rhabditophanes kr3021 RSKR_0001175400 I
scaffold1338-EXSNAP2012.3 Pristionchus exspectatus scaffold1338-EXSNAP2012.3 I
scaffold277-EXSNAP2012.12 Pristionchus exspectatus scaffold277-EXSNAP2012.12 I
scaffold395-EXSNAP2012.23 Pristionchus exspectatus scaffold395-EXSNAP2012.23 I
scaffold426-EXSNAP2012.35 Pristionchus exspectatus scaffold426-EXSNAP2012.35 I
scaffold488-EXSNAP2012.17 Pristionchus exspectatus scaffold488-EXSNAP2012.17 I
scaffold52-EXSNAP2012.30 Pristionchus exspectatus scaffold52-EXSNAP2012.30 I
SMUV_0000230901 Syphacia muris SMUV_0000230901 I
SMUV_0000835401 Syphacia muris SMUV_0000835401 I
SMUV_0001036101 Syphacia muris SMUV_0001036101 I
SPAL_0000533900 Strongyloides papillosus SPAL_0000533900 I
SPAL_0001056000 Strongyloides papillosus SPAL_0001056000 I
SPAL_0001238400 Strongyloides papillosus SPAL_0001238400 I
SSTP_0000230100 Strongyloides stercoralis SSTP_0000230100 I
SSTP_0000860300 Strongyloides stercoralis SSTP_0000860300 I
SSTP_0001170700 Strongyloides stercoralis SSTP_0001170700 I
SVE_0105800 Strongyloides venezuelensis SVE_0105800 I
SVE_0697700 Strongyloides venezuelensis SVE_0697700 I
SVE_1768400 Strongyloides venezuelensis SVE_1768400 I
SVUK_0000195901 Strongylus vulgaris SVUK_0000195901 I
TCLT_0000342401 Thelazia callipaeda TCLT_0000342401 I
TCNE_0000582701 Toxocara canis TCNE_0000582701 I
TELCIR_07460 Teladorsagia circumcincta TELCIR_07460 I
nhr-4 Caenorhabditis elegans WBGene00003603 I
nhr-14 Caenorhabditis elegans WBGene00003613 I
nhr-21 Caenorhabditis elegans WBGene00003620 I
nhr-34 Caenorhabditis elegans WBGene00003627 D
nhr-61 Caenorhabditis elegans WBGene00003651 I
nhr-62 Caenorhabditis elegans WBGene00003652 I
nhr-100 Caenorhabditis elegans WBGene00003690 I
nhr-118 Caenorhabditis elegans WBGene00003708 I
nhr-138 Caenorhabditis elegans WBGene00003728 I
WBGene00239376 Onchocerca volvulus WBGene00239376 I