CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LPERR01G03760
(
Leersia perrieri
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
LPERR01G03760
T002533_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q8H769_WHEAT
M09721_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1_01
0.774
0.918
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH
DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.737
0.878
DREB2G
M06662_2.00
Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH
Dap-seq
OMalley et al.(2016)
At5g18450_col_a
0.687
0.796
Q1ESI9_MAIZE
M09714_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB2A_02
0.684
0.816
PK08602.1
M01098_2.00
Cannabis sativa
NYCACCGCYN
NRGCGGTGRN
PBM
Lambert et al.(2019)
pTH11421
0.678
0.796
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LPERR01G03760.1
AP2
75
126
CAYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTAVEAAHAYDEAARAMYGS
LPERR01G03760.2
AP2
75
126
CAYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTAVEAAHAYDEAARAMYGS
Links
Other
AP2
family TFs
Other
Leersia perrieri
TFs
132 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DREB2G
Arabidopsis thaliana
AT5G18450
D
0.687
Q1ESI9_MAIZE
Zea mays
Q1ESI9_MAIZE
D
0.684
Q8H769_WHEAT
Triticum aestivum
Q8H769_WHEAT
D
0.774
PK07402.1
Cannabis sativa
PK07402.1
D
0.737
PK08602.1
Cannabis sativa
PK08602.1
D
0.678
BGIOSGA002846
Oryza indica
BGIOSGA002846
I
0.792
Bo4g190040
Brassica oleracea
Bo4g190040
I
0.686
Bo9g155940
Brassica oleracea
Bo9g155940
I
0.687
Bo9g177130
Brassica oleracea
Bo9g177130
I
0.685
Bra002159
Brassica rapa
Bra002159
I
0.687
Bra017011
Brassica rapa
Bra017011
I
0.686
BRADI2G04000
Brachypodium distachyon
BRADI2G04000
I
0.794
F775_05774
Aegilops tauschii
F775_05774
I
0.774
F775_32062
Aegilops tauschii
F775_32062
I
0.687
GLYMA03G29530
Glycine max
GLYMA03G29530
I
0.678
GLYMA06G45680
Glycine max
GLYMA06G45680
I
0.688
GLYMA19G32380
Glycine max
GLYMA19G32380
I
0.678
GRMZM2G006745
Zea mays
GRMZM2G006745
I
0.684
GRMZM2G376255
Zea mays
GRMZM2G376255
I
0.678
GSMUA_Achr11G24820_001
Musa acuminata
GSMUA_Achr11G24820_001
I
0.732
GSMUA_Achr3G00320_001
Musa acuminata
GSMUA_Achr3G00320_001
I
0.677
GSMUA_Achr5G28050_001
Musa acuminata
GSMUA_Achr5G28050_001
I
0.708
GSMUA_Achr6G32780_001
Musa acuminata
GSMUA_Achr6G32780_001
I
0.696
GSMUA_Achr9G04630_001
Musa acuminata
GSMUA_Achr9G04630_001
I
0.739
GSMUA_AchrUn_randomG08690_001
Musa acuminata
GSMUA_AchrUn_randomG08690_001
I
0.691
GSMUA_AchrUn_randomG14580_001
Musa acuminata
GSMUA_AchrUn_randomG14580_001
I
0.740
MLOC_66686
Hordeum vulgare
MLOC_66686
I
0.774
MTR_5g083330
Medicago truncatula
MTR_5g083330
I
0.700
MTR_5g083340
Medicago truncatula
MTR_5g083340
I
0.712
MTR_7g092190
Medicago truncatula
MTR_7g092190
I
0.678
OB01G13930
Oryza brachyantha
OB01G13930
I
0.792
OBART01G04210
Oryza barthii
OBART01G04210
I
0.792
OGLUM01G04560
Oryza glumaepatula
OGLUM01G04560
I
0.792
OLONG_014228
Oryza longistaminata
OLONG_014228
I
0.792
OMERI01G04110
Oryza meridionalis
OMERI01G04110
I
0.792
ONIVA01G04630
Oryza nivara
ONIVA01G04630
I
0.792
OPUNC01G03970
Oryza punctata
OPUNC01G03970
I
0.792
ORGLA01G0037700
Oryza glaberrima
ORGLA01G0037700
I
0.792
ORUFI01G04360
Oryza rufipogon
ORUFI01G04360
I
0.792
DREB2A
Oryza sativa
OS01G0165000
I
0.792
PGSC0003DMG400023717
Solanum tuberosum
PGSC0003DMG400023717
I
0.678
PGSC0003DMG400027117
Solanum tuberosum
PGSC0003DMG400027117
I
0.728
PGSC0003DMG400028700
Solanum tuberosum
PGSC0003DMG400028700
I
0.698
POPTR_0008s07360
Populus trichocarpa
POPTR_0008s07360
I
0.723
POPTR_0010s19100
Populus trichocarpa
POPTR_0010s19100
I
0.728
POPTR_0016s05360
Populus trichocarpa
POPTR_0016s05360
I
0.678
PRUPE_ppa007606mg
Prunus persica
PRUPE_ppa007606mg
I
0.691
PRUPE_ppa022733mg
Prunus persica
PRUPE_ppa022733mg
I
0.708
PRUPE_ppa022996mg
Prunus persica
PRUPE_ppa022996mg
I
0.692
PRUPE_ppa026176mg
Prunus persica
PRUPE_ppa026176mg
I
0.695
Sb03g004980
Sorghum bicolor
Sb03g004980
I
0.776
Sb09g016150
Sorghum bicolor
Sb09g016150
I
0.688
scaffold_601912.1
Arabidopsis lyrata
scaffold_601912.1
I
0.687
SELMODRAFT_27203
Selaginella moellendorffii
SELMODRAFT_27203
I
0.681
SELMODRAFT_38483
Selaginella moellendorffii
SELMODRAFT_38483
I
0.681
Si002067m.g
Setaria italica
Si002067m.g
I
0.767
Si022619m.g
Setaria italica
Si022619m.g
I
0.682
Solyc04g050750.1
Solanum lycopersicum
Solyc04g050750.1
I
0.698
Solyc05g052410.1
Solanum lycopersicum
Solyc05g052410.1
I
0.728
TCM_024756
Theobroma cacao
TCM_024756
I
0.678
TCM_043275
Theobroma cacao
TCM_043275
I
0.689
TCM_043302
Theobroma cacao
TCM_043302
I
0.691
TCM_043306
Theobroma cacao
TCM_043306
I
0.691
Traes_1AL_A9FB6BF52
Triticum aestivum
Traes_1AL_A9FB6BF52
I
0.687
Traes_1BL_BDF0801D01
Triticum aestivum
Traes_1BL_BDF0801D01
I
0.687
Traes_3AS_62742A0471
Triticum aestivum
Traes_3AS_62742A0471
I
0.774
TRAES3BF064700080CFD_g
Triticum aestivum
TRAES3BF064700080CFD_g
I
0.774
Traes_5BL_7F0FD1538
Triticum aestivum
Traes_5BL_7F0FD1538
I
0.764
TRIUR3_17409
Triticum urartu
TRIUR3_17409
I
0.687
TRIUR3_17973
Triticum urartu
TRIUR3_17973
I
0.774
VIT_08s0007g08150
Vitis vinifera
VIT_08s0007g08150
I
0.678
VIT_13s0067g01960
Vitis vinifera
VIT_13s0067g01960
I
0.750
Ca_07264
Cicer arietinum
Ca_07264
I
0.678
Cla006713
Citrullus lanatus
Cla006713
I
0.729
Pm003634
Prunus mume
Pm003634
I
0.683
Pm015262
Prunus mume
Pm015262
I
0.708
Pm018989
Prunus mume
Pm018989
I
0.691
27810.m000639
Ricinus communis
27810.m000639
I
0.678
29729.m002292
Ricinus communis
29729.m002292
I
0.724
cassava15495.m1
Manihot esculenta
cassava15495.m1
I
0.678
cassava19475.valid.m1
Manihot esculenta
cassava19475.valid.m1
I
0.731
cassava39243.m1
Manihot esculenta
cassava39243.m1
I
0.678
Cucsa.136780
Cucumis sativus
Cucsa.136780
I
0.730
gw1.120.55.1
Physcomitrella patens
gw1.120.55.1
I
0.686
mgf017629m
Mimulus guttatus
mgf017629m
I
0.690
Aquca_009_00282
Aquilegia coerulea
Aquca_009_00282
I
0.678
Aquca_013_00679
Aquilegia coerulea
Aquca_013_00679
I
0.685
Aquca_030_00214
Aquilegia coerulea
Aquca_030_00214
I
0.703
Bostr.26527s0367
Boechera stricta
Bostr.26527s0367
I
0.687
Cagra.0712s0008
Capsella grandiflora
Cagra.0712s0008
I
0.688
Carubv10002425m.g
Capsella rubella
Carubv10002425m.g
I
0.688
Ciclev10005549m.g
Citrus clementina
Ciclev10005549m.g
I
0.678
Ciclev10032029m.g
Citrus clementina
Ciclev10032029m.g
I
0.717
Eucgr.A02390
Eucalyptus grandis
Eucgr.A02390
I
0.684
Eucgr.G03094
Eucalyptus grandis
Eucgr.G03094
I
0.718
Eucgr.K02952
Eucalyptus grandis
Eucgr.K02952
I
0.705
evm.TU.supercontig_19.121
Carica papaya
evm.TU.supercontig_19.121
I
0.731
evm.TU.supercontig_51.23
Carica papaya
evm.TU.supercontig_51.23
I
0.683
evm.TU.supercontig_92.16
Carica papaya
evm.TU.supercontig_92.16
I
0.678
gene01985-v1.0-hybrid
Fragaria vesca
gene01985-v1.0-hybrid
I
0.705
gene16710-v1.0-hybrid
Fragaria vesca
gene16710-v1.0-hybrid
I
0.686
gene21047-v1.0-hybrid
Fragaria vesca
gene21047-v1.0-hybrid
I
0.699
gene26463-v1.0-hybrid
Fragaria vesca
gene26463-v1.0-hybrid
I
0.678
Gorai.009G271400
Gossypium raimondii
Gorai.009G271400
I
0.678
Gorai.011G235900
Gossypium raimondii
Gorai.011G235900
I
0.684
Lus10011319.g
Linum usitatissimum
Lus10011319.g
I
0.678
Lus10012210.g
Linum usitatissimum
Lus10012210.g
I
0.678
Lus10012226.g
Linum usitatissimum
Lus10012226.g
I
0.702
Lus10023633.g
Linum usitatissimum
Lus10023633.g
I
0.705
Lus10034902.g
Linum usitatissimum
Lus10034902.g
I
0.705
MDP0000147009
Malus domestica
MDP0000147009
I
0.693
MDP0000153866
Malus domestica
MDP0000153866
I
0.714
MDP0000165880
Malus domestica
MDP0000165880
I
0.698
MDP0000290585
Malus domestica
MDP0000290585
I
0.703
MDP0000446783
Malus domestica
MDP0000446783
I
0.693
MDP0000880312
Malus domestica
MDP0000880312
I
0.689
orange1.1g019546m.g
Citrus sinensis
orange1.1g019546m.g
I
0.717
orange1.1g042353m.g
Citrus sinensis
orange1.1g042353m.g
I
0.678
Pavir.Ca01725
Panicum virgatum
Pavir.Ca01725
I
0.688
Pavir.Cb01298
Panicum virgatum
Pavir.Cb01298
I
0.688
Pavir.Ea00429
Panicum virgatum
Pavir.Ea00429
I
0.783
Pavir.J37967
Panicum virgatum
Pavir.J37967
I
0.791
SapurV1A.0018s0040
Salix purpurea
SapurV1A.0018s0040
I
0.678
SapurV1A.0673s0120
Salix purpurea
SapurV1A.0673s0120
I
0.713
SapurV1A.1286s0030
Salix purpurea
SapurV1A.1286s0030
I
0.726
SapurV1A.1420s0050
Salix purpurea
SapurV1A.1420s0050
I
0.713
SapurV1A.2268s0010
Salix purpurea
SapurV1A.2268s0010
I
0.726
Thhalv10015907m.g
Eutrema salsugineum
Thhalv10015907m.g
I
0.687
Thhalv10016913m.g
Eutrema salsugineum
Thhalv10016913m.g
I
0.717
PK07829.1
Cannabis sativa
PK07829.1
I
0.690
PDK_20s1493381g003
Phoenix dactylifera
PDK_20s1493381g003
I
0.728