ORUFI04G24570 (Oryza rufipogon)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 ORUFI04G24570 T020552_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAV1
M01646_2.00 		Arabidopsis thaliana
NCACCTGAHN
NDTCAGGTGN		 PBM
Weirauch et al.(2014)
pTH8592 		0.725 0.725
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI04G24570.1 B3 87 181

Links

Other B3 family TFs
Other Oryza rufipogon TFs

213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00114p00142630 Amborella trichopoda AMTR_s00114p00142630 I 0.714
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.861
Bo4g197410 Brassica oleracea Bo4g197410 I 0.740
Bra040478 Brassica rapa Bra040478 I 0.750
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.861
GLYMA03G42301 Glycine max GLYMA03G42301 I 0.752
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.792
GLYMA16G01951 Glycine max GLYMA16G01951 I 0.792
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.846
GSMUA_Achr1G03600_001 Musa acuminata GSMUA_Achr1G03600_001 I 0.723
GSMUA_Achr4G26430_001 Musa acuminata GSMUA_Achr4G26430_001 I 0.762
GSMUA_Achr9G02600_001 Musa acuminata GSMUA_Achr9G02600_001 I 0.758
LPERR02G22870 Leersia perrieri LPERR02G22870 I 0.792
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.792
MTR_7g117455 Medicago truncatula MTR_7g117455 I 0.782
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.857
OB01G12610 Oryza brachyantha OB01G12610 I 0.725
OB02G35380 Oryza brachyantha OB02G35380 I 0.802
OB04G29740 Oryza brachyantha OB04G29740 I 0.758
OBART04G22880 Oryza barthii OBART04G22880 I 0.861
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.861
OLONG_010584 Oryza longistaminata OLONG_010584 I 0.745
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.861
OPUNC04G20430 Oryza punctata OPUNC04G20430 I 0.973
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.861
OS04G0581400 Oryza sativa OS04G0581400 I 0.861
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I 0.723
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I 0.723
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.772
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I 0.752
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.762
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I 0.762
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.772
NGA4 Arabidopsis lyrata scaffold_604140.1 I 0.728
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.733
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.723
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.762
TCM_005014 Theobroma cacao TCM_005014 I 0.772
TCM_015590 Theobroma cacao TCM_015590 I 0.846
Traes_1BL_53C31B54B Triticum aestivum Traes_1BL_53C31B54B I 0.741
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.966
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.929
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.792
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.792
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.743
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.782
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.747
Ca_01368 Cicer arietinum Ca_01368 I 0.772
Ca_25633 Cicer arietinum Ca_25633 I 0.736
Cla006845 Citrullus lanatus Cla006845 I 0.703
Pm024248 Prunus mume Pm024248 I 0.772
30068.m002615 Ricinus communis 30068.m002615 I 0.723
30076.m004471 Ricinus communis 30076.m004471 I 0.782
cassava29779.valid.m1 Manihot esculenta cassava29779.valid.m1 I 0.762
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.752
cassava39049.m1 Manihot esculenta cassava39049.m1 I 0.733
Cucsa.193290 Cucumis sativus Cucsa.193290 I 0.703
Cucsa.241440 Cucumis sativus Cucsa.241440 I 0.747
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.772
Bostr.7365s0004 Boechera stricta Bostr.7365s0004 I 0.725
Cagra.0483s0046 Capsella grandiflora Cagra.0483s0046 I 0.703
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.762
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.772
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I 0.733
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.772
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.772
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.762
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.782
gene18594-v1.0-hybrid Fragaria vesca gene18594-v1.0-hybrid I 0.762
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.857
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.752
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.857
Gorai.008G132400 Gossypium raimondii Gorai.008G132400 I 0.770
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.802
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.762
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.772
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I 0.723
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.772
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I 0.762
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I 0.772
SapurV1A.0666s0090 Salix purpurea SapurV1A.0666s0090 I 0.886
Thhalv10006123m.g Eutrema salsugineum Thhalv10006123m.g I 0.713
PK04952.1 Cannabis sativa PK04952.1 I 0.747
PK11025.1 Cannabis sativa PK11025.1 I 0.782
PK21157.1 Cannabis sativa PK21157.1 I 0.723
chr1.CM0105.800.nc Lotus japonicus chr1.CM0105.800.nc I 0.772
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.792
AC216872.3_FG002 Zea mays AC216872.3_FG002 N 0.700
AMTR_s00018p00040300 Amborella trichopoda AMTR_s00018p00040300 N 0.791
NGA3 Arabidopsis thaliana AT1G01030 N 0.723
NGA1 Arabidopsis thaliana AT2G46870 N 0.813
BGIOSGA005835 Oryza indica BGIOSGA005835 N 0.782
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.812
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.813
Bo3g039420 Brassica oleracea Bo3g039420 N 0.752
Bo4g006900 Brassica oleracea Bo4g006900 N 0.733
Bo4g099000 Brassica oleracea Bo4g099000 N 0.713
Bo5g002790 Brassica oleracea Bo5g002790 N 0.713
Bo6g079210 Brassica oleracea Bo6g079210 N 0.713
Bo8g097490 Brassica oleracea Bo8g097490 N 0.723
Bra000434 Brassica rapa Bra000434 N 0.733
Bra004501 Brassica rapa Bra004501 N 0.723
Bra005886 Brassica rapa Bra005886 N 0.714
Bra007646 Brassica rapa Bra007646 N 0.723
Bra009171 Brassica rapa Bra009171 N 0.724
Bra014415 Brassica rapa Bra014415 N 0.723
Bra030497 Brassica rapa Bra030497 N 0.703
BRADI1G77150 Brachypodium distachyon BRADI1G77150 N 0.752
BRADI3G32140 Brachypodium distachyon BRADI3G32140 N 0.713
BRADI4G25170 Brachypodium distachyon BRADI4G25170 N 0.703
F775_04153 Aegilops tauschii F775_04153 N 0.813
NGA3 Arabidopsis lyrata fgenesh2_kg.1__134__AT1G01030.1 N 0.723
fgenesh2_kg.181__3__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.181__3__AT2G46870.1 N 0.813
fgenesh2_kg.4__2914__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.4__2914__AT2G46870.1 N 0.813
NGA2 Arabidopsis lyrata fgenesh2_kg.5__2696__AT3G61970.1 N 0.703
GLYMA03G35700 Glycine max GLYMA03G35700 N 0.714
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.842
GRMZM2G024948 Zea mays GRMZM2G024948 N 0.782
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.752
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.802
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.822
GRMZM2G125095 Zea mays GRMZM2G125095 N 0.769
GRMZM2G142999 Zea mays GRMZM2G142999 N 0.737
GRMZM5G805685 Zea mays GRMZM5G805685 N 0.714
GSMUA_Achr4G30170_001 Musa acuminata GSMUA_Achr4G30170_001 N 0.768
GSMUA_Achr5G20340_001 Musa acuminata GSMUA_Achr5G20340_001 N 0.743
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.812
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.851
LPERR10G12990 Leersia perrieri LPERR10G12990 N 0.813
MLOC_48938 Hordeum vulgare MLOC_48938 N 0.864
OB03G11610 Oryza brachyantha OB03G11610 N 0.912
OB10G24100 Oryza brachyantha OB10G24100 N 0.769
OBART02G28100 Oryza barthii OBART02G28100 N 0.782
OBART02G28110 Oryza barthii OBART02G28110 N 0.811
OBART03G01650 Oryza barthii OBART03G01650 N 0.812
OBART10G17010 Oryza barthii OBART10G17010 N 0.813
OGLUM02G28660 Oryza glumaepatula OGLUM02G28660 N 0.782
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.812
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.813
OMERI02G27240 Oryza meridionalis OMERI02G27240 N 0.782
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.812
OMERI08G03480 Oryza meridionalis OMERI08G03480 N 0.703
OMERI10G13480 Oryza meridionalis OMERI10G13480 N 0.733
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.812
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.813
ONIVA12G15340 Oryza nivara ONIVA12G15340 N 0.782
OPUNC02G25780 Oryza punctata OPUNC02G25780 N 0.782
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.812
OPUNC07G09160 Oryza punctata OPUNC07G09160 N 0.758
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.813
ORGLA02G0241100 Oryza glaberrima ORGLA02G0241100 N 0.782
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.812
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.813
ORUFI02G29620 Oryza rufipogon ORUFI02G29620 N 0.782
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.813
OS02G0683500 Oryza sativa OS02G0683500 N 0.782
OS03G0120900 Oryza sativa OS03G0120900 N 0.812
OS10G0537100 Oryza sativa OS10G0537100 N 0.813
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.780
PGSC0003DMG400028159 Solanum tuberosum PGSC0003DMG400028159 N 0.736
POPTR_0002s18260 Populus trichocarpa POPTR_0002s18260 N 0.762
PRUPE_ppa015999mg Prunus persica PRUPE_ppa015999mg N 0.723
Sb01g030520 Sorghum bicolor Sb01g030520 N 0.724
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.822
Sb04g031710 Sorghum bicolor Sb04g031710 N 0.782
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.832
SELMODRAFT_59317 Selaginella moellendorffii SELMODRAFT_59317 N 0.706
Si011823m.g Setaria italica Si011823m.g N 0.832
Si020241m.g Setaria italica Si020241m.g N 0.733
Si036864m.g Setaria italica Si036864m.g N 0.912
Si039972m.g Setaria italica Si039972m.g N 0.703
Solyc10g083210.1 Solanum lycopersicum Solyc10g083210.1 N 0.736
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.842
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.762
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.772
Traes_4DL_D0F3E9568 Triticum aestivum Traes_4DL_D0F3E9568 N 0.713
Traes_5BL_B98E347A8 Triticum aestivum Traes_5BL_B98E347A8 N 0.703
Traes_5DL_CACDF70D6 Triticum aestivum Traes_5DL_CACDF70D6 N 0.703
TRIUR3_01515 Triticum urartu TRIUR3_01515 N 0.785
TRIUR3_06598 Triticum urartu TRIUR3_06598 N 0.763
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.703
Cla005055 Citrullus lanatus Cla005055 N 0.704
Cla014858 Citrullus lanatus Cla014858 N 0.768
Pm028725 Prunus mume Pm028725 N 0.723
Cucsa.106780 Cucumis sativus Cucsa.106780 N 0.768
Cucsa.349830 Cucumis sativus Cucsa.349830 N 0.703
mgf023769m Mimulus guttatus mgf023769m N 0.752
Bostr.13158s0202 Boechera stricta Bostr.13158s0202 N 0.703
Bostr.25993s0080 Boechera stricta Bostr.25993s0080 N 0.824
Bostr.5325s0023 Boechera stricta Bostr.5325s0023 N 0.802
Cagra.0050s0013 Capsella grandiflora Cagra.0050s0013 N 0.813
Cagra.1968s0048 Capsella grandiflora Cagra.1968s0048 N 0.723
Carubv10009540m.g Capsella rubella Carubv10009540m.g N 0.723
Carubv10023656m.g Capsella rubella Carubv10023656m.g N 0.813
Gorai.004G128200 Gossypium raimondii Gorai.004G128200 N 0.770
Lus10021326.g Linum usitatissimum Lus10021326.g N 0.703
MDP0000128295 Malus domestica MDP0000128295 N 0.809
MDP0000138163 Malus domestica MDP0000138163 N 0.703
MDP0000288808 Malus domestica MDP0000288808 N 0.752
Pavir.Aa00929 Panicum virgatum Pavir.Aa00929 N 0.782
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.832
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.901
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.901
Pavir.J06582 Panicum virgatum Pavir.J06582 N 0.713
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.916
Pavir.J35382 Panicum virgatum Pavir.J35382 N 0.713
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.832
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N 0.747
SapurV1A.1211s0020 Salix purpurea SapurV1A.1211s0020 N 0.714
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N 0.747
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N 0.733
Thhalv10008068m.g Eutrema salsugineum Thhalv10008068m.g N 0.723
Thhalv10021305m.g Eutrema salsugineum Thhalv10021305m.g N 0.714