Sb02g028220 (Sorghum bicolor)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Sb02g028220 T128218_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Sb02g028220.1 C2H2 ZF 360 381
Sb02g028220.1 C2H2 ZF 380 409

Links

Other C2H2 ZF family TFs
Other Sorghum bicolor TFs

219 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00093p00164790 Amborella trichopoda AMTR_s00093p00164790 N 0.761
WIP3 Arabidopsis thaliana AT1G08290 N 0.763
WIP6 Arabidopsis thaliana AT1G13290 N 0.761
BGIOSGA000452 Oryza indica BGIOSGA000452 N 0.768
BGIOSGA030484 Oryza indica BGIOSGA030484 N 0.758
BGIOSGA031001 Oryza indica BGIOSGA031001 N 0.821
Bo5g015200 Brassica oleracea Bo5g015200 N 0.761
Bo5g081360 Brassica oleracea Bo5g081360 N 0.787
Bra019822 Brassica rapa Bra019822 N 0.761
BRADI2G23870 Brachypodium distachyon BRADI2G23870 N 0.768
BRADI2G55540 Brachypodium distachyon BRADI2G55540 N 0.768
BRADI3G39820 Brachypodium distachyon BRADI3G39820 N 0.821
BRADI4G27770 Brachypodium distachyon BRADI4G27770 N 0.758
BRADI4G33557 Brachypodium distachyon BRADI4G33557 N 0.827
F775_11193 Aegilops tauschii F775_11193 N 0.768
F775_14972 Aegilops tauschii F775_14972 N 0.827
WIP3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1000684 N 0.763
TT1 Arabidopsis lyrata fgenesh2_kg.1__3606__AT1G34790.1 N 0.768
GLYMA01G22120 Glycine max GLYMA01G22120 N 0.761
GLYMA02G10970 Glycine max GLYMA02G10970 N 0.761
GLYMA08G16390 Glycine max GLYMA08G16390 N 0.787
GLYMA10G34770 Glycine max GLYMA10G34770 N 0.761
GLYMA11G19060 Glycine max GLYMA11G19060 N 0.782
GLYMA12G09400 Glycine max GLYMA12G09400 N 0.782
GLYMA12G30930 Glycine max GLYMA12G30930 N 0.782
GLYMA12G36660 Glycine max GLYMA12G36660 N 0.787
GLYMA13G01720 Glycine max GLYMA13G01720 N 0.768
GLYMA13G27371 Glycine max GLYMA13G27371 N 0.787
GLYMA13G39370 Glycine max GLYMA13G39370 N 0.782
GLYMA14G35140 Glycine max GLYMA14G35140 N 0.768
GLYMA15G42870 Glycine max GLYMA15G42870 N 0.787
GLYMA20G32750 Glycine max GLYMA20G32750 N 0.761
GRMZM2G000836 Zea mays GRMZM2G000836 N 0.768
GRMZM2G061545 Zea mays GRMZM2G061545 N 0.761
GRMZM2G071101 Zea mays GRMZM2G071101 N 0.821
GRMZM2G084014 Zea mays GRMZM2G084014 N 0.827
GRMZM2G150011 Zea mays GRMZM2G150011 N 0.758
GRMZM2G445684 Zea mays GRMZM2G445684 N 0.821
GSMUA_Achr3G03850_001 Musa acuminata GSMUA_Achr3G03850_001 N 0.781
GSMUA_Achr3G11870_001 Musa acuminata GSMUA_Achr3G11870_001 N 0.761
GSMUA_Achr4G01560_001 Musa acuminata GSMUA_Achr4G01560_001 N 0.772
GSMUA_Achr6G01410_001 Musa acuminata GSMUA_Achr6G01410_001 N 0.758
GSMUA_Achr9G12600_001 Musa acuminata GSMUA_Achr9G12600_001 N 0.781
LPERR01G32600 Leersia perrieri LPERR01G32600 N 0.768
LPERR08G16620 Leersia perrieri LPERR08G16620 N 0.821
LPERR09G03450 Leersia perrieri LPERR09G03450 N 0.758
LPERR09G10700 Leersia perrieri LPERR09G10700 N 0.821
MLOC_2787 Hordeum vulgare MLOC_2787 N 0.827
MLOC_54308 Hordeum vulgare MLOC_54308 N 0.758
MLOC_65351 Hordeum vulgare MLOC_65351 N 0.761
MTR_1g093095 Medicago truncatula MTR_1g093095 N 0.761
OB05G26090 Oryza brachyantha OB05G26090 N 0.768
OB08G26650 Oryza brachyantha OB08G26650 N 0.821
OBART01G37960 Oryza barthii OBART01G37960 N 0.768
OBART06G20890 Oryza barthii OBART06G20890 N 0.761
OBART08G19670 Oryza barthii OBART08G19670 N 0.821
OGLUM01G42130 Oryza glumaepatula OGLUM01G42130 N 0.768
OGLUM05G19360 Oryza glumaepatula OGLUM05G19360 N 0.768
OGLUM08G20830 Oryza glumaepatula OGLUM08G20830 N 0.821
OGLUM09G05550 Oryza glumaepatula OGLUM09G05550 N 0.758
OGLUM09G15150 Oryza glumaepatula OGLUM09G15150 N 0.821
OMERI01G34920 Oryza meridionalis OMERI01G34920 N 0.768
OMERI08G16450 Oryza meridionalis OMERI08G16450 N 0.821
OMERI09G03940 Oryza meridionalis OMERI09G03940 N 0.758
OMERI09G11270 Oryza meridionalis OMERI09G11270 N 0.821
ONIVA04G25710 Oryza nivara ONIVA04G25710 N 0.768
ONIVA08G08420 Oryza nivara ONIVA08G08420 N 0.758
ONIVA08G21960 Oryza nivara ONIVA08G21960 N 0.821
ONIVA09G15100 Oryza nivara ONIVA09G15100 N 0.821
OPUNC01G36780 Oryza punctata OPUNC01G36780 N 0.768
OPUNC08G17810 Oryza punctata OPUNC08G17810 N 0.821
OPUNC09G04260 Oryza punctata OPUNC09G04260 N 0.758
OPUNC09G12930 Oryza punctata OPUNC09G12930 N 0.821
ORGLA01G0317700 Oryza glaberrima ORGLA01G0317700 N 0.768
ORGLA08G0173000 Oryza glaberrima ORGLA08G0173000 N 0.821
ORGLA09G0111700 Oryza glaberrima ORGLA09G0111700 N 0.821
ORUFI01G41290 Oryza rufipogon ORUFI01G41290 N 0.768
ORUFI09G05390 Oryza rufipogon ORUFI09G05390 N 0.758
ORUFI09G15680 Oryza rufipogon ORUFI09G15680 N 0.821
OS01G0859100 Oryza sativa OS01G0859100 N 0.768
OS08G0504000 Oryza sativa OS08G0504000 N 0.821
OS09G0307400 Oryza sativa OS09G0307400 N 0.758
OS09G0485600 Oryza sativa OS09G0485600 N 0.821
PGSC0003DMG400006808 Solanum tuberosum PGSC0003DMG400006808 N 0.772
PGSC0003DMG400007112 Solanum tuberosum PGSC0003DMG400007112 N 0.782
PGSC0003DMG400030803 Solanum tuberosum PGSC0003DMG400030803 N 0.758
POPTR_0001s05630 Populus trichocarpa POPTR_0001s05630 N 0.776
POPTR_0001s27490 Populus trichocarpa POPTR_0001s27490 N 0.781
POPTR_0002s09840 Populus trichocarpa POPTR_0002s09840 N 0.758
POPTR_0004s19460 Populus trichocarpa POPTR_0004s19460 N 0.782
POPTR_0009s06700 Populus trichocarpa POPTR_0009s06700 N 0.781
POPTR_0009s14590 Populus trichocarpa POPTR_0009s14590 N 0.782
POPTR_0010s13910 Populus trichocarpa POPTR_0010s13910 N 0.761
PRUPE_ppa020013m2g Prunus persica PRUPE_ppa020013m2g N 0.761
PRUPE_ppa023619mg Prunus persica PRUPE_ppa023619mg N 0.782
Sb02g020840 Sorghum bicolor Sb02g020840 N 0.758
Sb07g028010 Sorghum bicolor Sb07g028010 N 0.821
Sb09g021850 Sorghum bicolor Sb09g021850 N 0.768
SELMODRAFT_110681 Selaginella moellendorffii SELMODRAFT_110681 N 0.761
SELMODRAFT_128378 Selaginella moellendorffii SELMODRAFT_128378 N 0.761
SELMODRAFT_36986 Selaginella moellendorffii SELMODRAFT_36986 N 0.761
SELMODRAFT_36987 Selaginella moellendorffii SELMODRAFT_36987 N 0.761
SELMODRAFT_57106 Selaginella moellendorffii SELMODRAFT_57106 N 0.761
SELMODRAFT_57114 Selaginella moellendorffii SELMODRAFT_57114 N 0.761
Si013819m.g Setaria italica Si013819m.g N 0.821
Si022296m.g Setaria italica Si022296m.g N 0.768
Si029897m.g Setaria italica Si029897m.g N 0.827
Si030360m.g Setaria italica Si030360m.g N 0.758
Solyc01g087050.2 Solanum lycopersicum Solyc01g087050.2 N 0.772
Solyc04g074320.1 Solanum lycopersicum Solyc04g074320.1 N 0.758
TCM_005892 Theobroma cacao TCM_005892 N 0.781
TCM_011858 Theobroma cacao TCM_011858 N 0.761
TCM_034881 Theobroma cacao TCM_034881 N 0.768
TCM_040610 Theobroma cacao TCM_040610 N 0.761
TCM_041441 Theobroma cacao TCM_041441 N 0.782
TRAES3BF099700020CFD_g Triticum aestivum TRAES3BF099700020CFD_g N 0.768
Traes_5BL_46BDE583B Triticum aestivum Traes_5BL_46BDE583B N 0.758
Traes_5BL_6888AE9CB Triticum aestivum Traes_5BL_6888AE9CB N 0.827
Traes_5DL_51643AC9F Triticum aestivum Traes_5DL_51643AC9F N 0.827
Traes_5DL_98FA0887C Triticum aestivum Traes_5DL_98FA0887C N 0.758
Traes_7AL_1070DBD71 Triticum aestivum Traes_7AL_1070DBD71 N 0.761
Traes_7AS_8054DC45D Triticum aestivum Traes_7AS_8054DC45D N 0.827
TRIUR3_23735 Triticum urartu TRIUR3_23735 N 0.761
TRIUR3_30490 Triticum urartu TRIUR3_30490 N 0.827
TRIUR3_30537 Triticum urartu TRIUR3_30537 N 0.758
DOT5 Vitis vinifera VIT_01s0011g03100 N 0.761
WIP3 Vitis vinifera VIT_06s0080g00270 N 0.782
TT1 Vitis vinifera VIT_18s0001g05860 N 0.768
Ca_07051 Cicer arietinum Ca_07051 N 0.782
Ca_08435 Cicer arietinum Ca_08435 N 0.761
Ca_16482 Cicer arietinum Ca_16482 N 0.776
Ca_21713 Cicer arietinum Ca_21713 N 0.767
Ca_24699 Cicer arietinum Ca_24699 N 0.761
Ca_27078 Cicer arietinum Ca_27078 N 0.768
Cla000184 Citrullus lanatus Cla000184 N 0.768
Cla002714 Citrullus lanatus Cla002714 N 0.761
Cla015481 Citrullus lanatus Cla015481 N 0.781
Pm001374 Prunus mume Pm001374 N 0.782
Pm029018 Prunus mume Pm029018 N 0.761
29908.m006047 Ricinus communis 29908.m006047 N 0.768
30055.m001542 Ricinus communis 30055.m001542 N 0.782
30061.m000294 Ricinus communis 30061.m000294 N 0.781
cassava13451.valid.m1 Manihot esculenta cassava13451.valid.m1 N 0.782
cassava16214.m1 Manihot esculenta cassava16214.m1 N 0.782
cassava39829.m1 Manihot esculenta cassava39829.m1 N 0.781
cassava44390.m1 Manihot esculenta cassava44390.m1 N 0.768
cassava46219.m1 Manihot esculenta cassava46219.m1 N 0.761
Cucsa.050260 Cucumis sativus Cucsa.050260 N 0.781
Cucsa.065460 Cucumis sativus Cucsa.065460 N 0.781
Cucsa.199850 Cucumis sativus Cucsa.199850 N 0.768
Cucsa.248320 Cucumis sativus Cucsa.248320 N 0.761
e_gw1.203.23.1 Physcomitrella patens e_gw1.203.23.1 N 0.761
gw1.359.34.1 Physcomitrella patens gw1.359.34.1 N 0.761
mgf019910m Mimulus guttatus mgf019910m N 0.776
mgf022319m Mimulus guttatus mgf022319m N 0.781
mgf022981m Mimulus guttatus mgf022981m N 0.758
Aquca_004_00109 Aquilegia coerulea Aquca_004_00109 N 0.782
Aquca_006_00227 Aquilegia coerulea Aquca_006_00227 N 0.782
Aquca_026_00228 Aquilegia coerulea Aquca_026_00228 N 0.761
Aquca_040_00077 Aquilegia coerulea Aquca_040_00077 N 0.782
Bostr.1040s0072 Boechera stricta Bostr.1040s0072 N 0.768
Bostr.13671s0117 Boechera stricta Bostr.13671s0117 N 0.761
Bostr.25219s0116 Boechera stricta Bostr.25219s0116 N 0.763
Cagra.0764s0003 Capsella grandiflora Cagra.0764s0003 N 0.768
Cagra.3501s0170 Capsella grandiflora Cagra.3501s0170 N 0.761
Cagra.4395s0018 Capsella grandiflora Cagra.4395s0018 N 0.763
Carubv10009617m.g Capsella rubella Carubv10009617m.g N 0.763
Carubv10012013m.g Capsella rubella Carubv10012013m.g N 0.761
Carubv10012266m.g Capsella rubella Carubv10012266m.g N 0.768
Ciclev10003648m.g Citrus clementina Ciclev10003648m.g N 0.768
Ciclev10028757m.g Citrus clementina Ciclev10028757m.g N 0.782
Eucgr.B03047 Eucalyptus grandis Eucgr.B03047 N 0.761
Eucgr.B03870 Eucalyptus grandis Eucgr.B03870 N 0.782
Eucgr.F00336 Eucalyptus grandis Eucgr.F00336 N 0.758
Eucgr.J00788 Eucalyptus grandis Eucgr.J00788 N 0.761
Eucgr.J01266 Eucalyptus grandis Eucgr.J01266 N 0.771
evm.TU.contig_31438 Carica papaya evm.TU.contig_31438 N 0.791
evm.TU.contig_35924 Carica papaya evm.TU.contig_35924 N 0.782
evm.TU.supercontig_1.215 Carica papaya evm.TU.supercontig_1.215 N 0.761
gene22042-v1.0-hybrid Fragaria vesca gene22042-v1.0-hybrid N 0.782
Gorai.001G121700 Gossypium raimondii Gorai.001G121700 N 0.782
Gorai.004G037000 Gossypium raimondii Gorai.004G037000 N 0.781
Gorai.004G065400 Gossypium raimondii Gorai.004G065400 N 0.781
Gorai.006G111400 Gossypium raimondii Gorai.006G111400 N 0.782
Gorai.007G177300 Gossypium raimondii Gorai.007G177300 N 0.781
Gorai.010G039600 Gossypium raimondii Gorai.010G039600 N 0.768
Gorai.013G080100 Gossypium raimondii Gorai.013G080100 N 0.761
Gorai.013G250800 Gossypium raimondii Gorai.013G250800 N 0.761
Lus10004887.g Linum usitatissimum Lus10004887.g N 0.782
Lus10020597.g Linum usitatissimum Lus10020597.g N 0.782
Lus10021700.g Linum usitatissimum Lus10021700.g N 0.761
Lus10029525.g Linum usitatissimum Lus10029525.g N 0.772
Lus10033454.g Linum usitatissimum Lus10033454.g N 0.768
Lus10035044.g Linum usitatissimum Lus10035044.g N 0.761
Lus10039613.g Linum usitatissimum Lus10039613.g N 0.772
MDP0000131949 Malus domestica MDP0000131949 N 0.782
MDP0000142494 Malus domestica MDP0000142494 N 0.780
MDP0000144266 Malus domestica MDP0000144266 N 0.782
MDP0000300013 Malus domestica MDP0000300013 N 0.782
MDP0000303483 Malus domestica MDP0000303483 N 0.761
MDP0000573922 Malus domestica MDP0000573922 N 0.765
orange1.1g037179m.g Citrus sinensis orange1.1g037179m.g N 0.768
orange1.1g037234m.g Citrus sinensis orange1.1g037234m.g N 0.777
orange1.1g039549m.g Citrus sinensis orange1.1g039549m.g N 0.782
Pavir.Ba01731 Panicum virgatum Pavir.Ba01731 N 0.827
Pavir.Ba03009 Panicum virgatum Pavir.Ba03009 N 0.758
Pavir.Fa00506 Panicum virgatum Pavir.Fa00506 N 0.821
Pavir.Fb01879 Panicum virgatum Pavir.Fb01879 N 0.821
Pavir.J11927 Panicum virgatum Pavir.J11927 N 0.768
SapurV1A.0027s0280 Salix purpurea SapurV1A.0027s0280 N 0.762
SapurV1A.0080s0360 Salix purpurea SapurV1A.0080s0360 N 0.782
SapurV1A.0219s0040 Salix purpurea SapurV1A.0219s0040 N 0.805
SapurV1A.1001s0040 Salix purpurea SapurV1A.1001s0040 N 0.761
Thhalv10008125m.g Eutrema salsugineum Thhalv10008125m.g N 0.763
Thhalv10009489m.g Eutrema salsugineum Thhalv10009489m.g N 0.761
PK05257.1 Cannabis sativa PK05257.1 N 0.782
chr2.CM1731.90.nc Lotus japonicus chr2.CM1731.90.nc N 0.761
chr3.CM1144.10.nc Lotus japonicus chr3.CM1144.10.nc N 0.782
LjSGA_032817.1 Lotus japonicus LjSGA_032817.1 N 0.768