PGSC0003DMG400011579 (Solanum tuberosum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 PGSC0003DMG400011579 T194708_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.857 0.889
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.857 0.889
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.851 0.917
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.851 0.917
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.851 0.917
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.847 0.861
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.843 0.833
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.843 0.833
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.837 0.833
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.837 0.833
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.837 0.833
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.832 0.806
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.832 0.806
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.830 0.833
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.819 0.778
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.819 0.750
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.819 0.750
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.819 0.750
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400030274 GATA 195 230
PGSC0003DMT400030276 GATA 105 140

Links

Other GATA family TFs
Other Solanum tuberosum TFs

610 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RFX5 Homo sapiens ENSG00000143390 D
RFX7 Homo sapiens ENSG00000181827 D
Rfx7 Mus musculus ENSMUSG00000037674 D
AMAG_10999 Allomyces macrogynus AMAG_10999 I
AMAG_11601 Allomyces macrogynus AMAG_11601 I
CAOG_00356 Capsaspora owczarzaki CAOG_00356 I
CpipJ_CPIJ006094 Culex pipiens CpipJ_CPIJ006094 I
PTSG_12063 Salpingoeca rosetta PTSG_12063 I
AAEL013752 Aedes aegypti AAEL013752 I
ACEP24602 Atta cephalotes ACEP24602 I
ACRE_029400 Acremonium chrysogenum ACRE_029400 I
ACYPI002124 Acyrthosiphon pisum ACYPI002124 I
ADAC008404 Anopheles darlingi ADAC008404 I
AGAP013226 Anopheles gambiae AGAP013226 I
Aqu1.223491 Amphimedon queenslandica Aqu1.223491 I
BDDG_02784 Blastomyces dermatitidis BDDG_02784 I
BGIBMGA007758 Bombyx mori BGIBMGA007758 I
CapteG131555 Capitella teleta CapteG131555 I
CGI_10006904 Crassostrea gigas CGI_10006904 I
CPIJ006094 Culex quinquefasciatus CPIJ006094 I
DAPPUDRAFT_64123 Daphnia pulex DAPPUDRAFT_64123 I
RFX7 Anolis carolinensis ENSACAG00000008482 I
ENSACAG00000029645 Anolis carolinensis ENSACAG00000029645 I
ENSAMEG00000000695 Ailuropoda melanoleuca ENSAMEG00000000695 I
ENSAMEG00000018368 Ailuropoda melanoleuca ENSAMEG00000018368 I
ENSAMXG00000008359 Astyanax mexicanus ENSAMXG00000008359 I
ENSAMXG00000014807 Astyanax mexicanus ENSAMXG00000014807 I
ENSAMXG00000020093 Astyanax mexicanus ENSAMXG00000020093 I
ENSAPLG00000002900 Anas platyrhynchos ENSAPLG00000002900 I
ENSAPLG00000005911 Anas platyrhynchos ENSAPLG00000005911 I
RFX7 Bos taurus ENSBTAG00000000565 I
RFX5 Bos taurus ENSBTAG00000017580 I
RFX5 Canis familiaris ENSCAFG00000012661 I
RFX7 Canis familiaris ENSCAFG00000016029 I
RFX7 Choloepus hoffmanni ENSCHOG00000003451 I
RFX5 Choloepus hoffmanni ENSCHOG00000012900 I
RFX7 Callithrix jacchus ENSCJAG00000002163 I
RFX5 Callithrix jacchus ENSCJAG00000007482 I
ENSCPOG00000005366 Cavia porcellus ENSCPOG00000005366 I
ENSCPOG00000010643 Cavia porcellus ENSCPOG00000010643 I
ENSCSAG00000001799 Chlorocebus sabaeus ENSCSAG00000001799 I
ENSCSAG00000011819 Chlorocebus sabaeus ENSCSAG00000011819 I
rfx5 Danio rerio ENSDARG00000063258 I
rfx7 Danio rerio ENSDARG00000077237 I
RFX7 Danio rerio ENSDARG00000103691 I
RFX5 Dasypus novemcinctus ENSDNOG00000035113 I
RFX7 Dasypus novemcinctus ENSDNOG00000044983 I
ENSDORG00000015967 Dipodomys ordii ENSDORG00000015967 I
RFX7 Equus caballus ENSECAG00000002379 I
RFX5 Equus caballus ENSECAG00000024774 I
RFX5 Erinaceus europaeus ENSEEUG00000010785 I
RFX7 Erinaceus europaeus ENSEEUG00000013718 I
RFX5 Echinops telfairi ENSETEG00000013503 I
RFX7 Echinops telfairi ENSETEG00000015037 I
ENSFALG00000010929 Ficedula albicollis ENSFALG00000010929 I
ENSFALG00000012087 Ficedula albicollis ENSFALG00000012087 I
RFX5 Felis catus ENSFCAG00000005568 I
RFX7 Felis catus ENSFCAG00000029408 I
RFX7 Gasterosteus aculeatus ENSGACG00000006090 I
rfx7 Gasterosteus aculeatus ENSGACG00000015838 I
RFX5 Gallus gallus ENSGALG00000000836 I
RFX7 Gorilla gorilla ENSGGOG00000002118 I
RFX5 Gorilla gorilla ENSGGOG00000016795 I
ENSGMOG00000002477 Gadus morhua ENSGMOG00000002477 I
ENSGMOG00000004164 Gadus morhua ENSGMOG00000004164 I
ENSLACG00000015878 Latimeria chalumnae ENSLACG00000015878 I
RFX7 Loxodonta africana ENSLAFG00000018745 I
RFX5 Loxodonta africana ENSLAFG00000030906 I
ENSLOCG00000008459 Lepisosteus oculatus ENSLOCG00000008459 I
ENSLOCG00000013505 Lepisosteus oculatus ENSLOCG00000013505 I
ENSMEUG00000007846 Macropus eugenii ENSMEUG00000007846 I
ENSMEUG00000011101 Macropus eugenii ENSMEUG00000011101 I
ENSMGAG00000001126 Meleagris gallopavo ENSMGAG00000001126 I
RFX7 Meleagris gallopavo ENSMGAG00000005745 I
RFX5 Myotis lucifugus ENSMLUG00000015218 I
RFX7 Myotis lucifugus ENSMLUG00000028676 I
ENSMMUG00000013172 Macaca mulatta ENSMMUG00000013172 I
RFX7 Macaca mulatta ENSMMUG00000017801 I
RFX7 Monodelphis domestica ENSMODG00000008136 I
RFX5 Monodelphis domestica ENSMODG00000018866 I
ENSMPUG00000002204 Mustela putorius furo ENSMPUG00000002204 I
ENSMPUG00000003735 Mustela putorius furo ENSMPUG00000003735 I
Rfx5 Mus musculus ENSMUSG00000005774 I
ENSNLEG00000006658 Nomascus leucogenys ENSNLEG00000006658 I
ENSNLEG00000010170 Nomascus leucogenys ENSNLEG00000010170 I
RFX7 Ornithorhynchus anatinus ENSOANG00000008526 I
ENSOARG00000020885 Ovis aries ENSOARG00000020885 I
ENSOARG00000020987 Ovis aries ENSOARG00000020987 I
ENSOCUG00000011564 Oryctolagus cuniculus ENSOCUG00000011564 I
RFX7 Oryctolagus cuniculus ENSOCUG00000013678 I
RFX5 Otolemur garnettii ENSOGAG00000008120 I
RFX7 Otolemur garnettii ENSOGAG00000031795 I
ENSONIG00000003955 Oreochromis niloticus ENSONIG00000003955 I
ENSONIG00000005780 Oreochromis niloticus ENSONIG00000005780 I
ENSONIG00000008334 Oreochromis niloticus ENSONIG00000008334 I
RFX7 Ochotona princeps ENSOPRG00000003155 I
ENSORLG00000001269 Oryzias latipes ENSORLG00000001269 I
RFX7 Oryzias latipes ENSORLG00000005342 I
rfx7 Oryzias latipes ENSORLG00000008583 I
ENSPANG00000005712 Papio anubis ENSPANG00000005712 I
ENSPANG00000017297 Papio anubis ENSPANG00000017297 I
RFX7 Procavia capensis ENSPCAG00000004974 I
RFX5 Procavia capensis ENSPCAG00000011056 I
ENSPFOG00000002938 Poecilia formosa ENSPFOG00000002938 I
ENSPFOG00000010592 Poecilia formosa ENSPFOG00000010592 I
ENSPMAG00000005066 Petromyzon marinus ENSPMAG00000005066 I
ENSPPYG00000000867 Pongo abelii ENSPPYG00000000867 I
ENSPPYG00000006502 Pongo abelii ENSPPYG00000006502 I
ENSPSIG00000014731 Pelodiscus sinensis ENSPSIG00000014731 I
ENSPSIG00000018073 Pelodiscus sinensis ENSPSIG00000018073 I
RFX5 Pan troglodytes ENSPTRG00000001286 I
RFX7 Pan troglodytes ENSPTRG00000007104 I
RFX7 Pteropus vampyrus ENSPVAG00000005381 I
RFX5 Pteropus vampyrus ENSPVAG00000011680 I
Rfx5 Rattus norvegicus ENSRNOG00000021012 I
Rfx7 Rattus norvegicus ENSRNOG00000060367 I
RFX5 Sorex araneus ENSSARG00000000750 I
RFX7 Sorex araneus ENSSARG00000010801 I
ENSSHAG00000003875 Sarcophilus harrisii ENSSHAG00000003875 I
ENSSHAG00000014366 Sarcophilus harrisii ENSSHAG00000014366 I
RFX5 Sus scrofa ENSSSCG00000006625 I
ENSSSCG00000024042 Sus scrofa ENSSSCG00000024042 I
ENSSTOG00000013246 Ictidomys tridecemlineatus ENSSTOG00000013246 I
RFX5 Tupaia belangeri ENSTBEG00000006419 I
RFX7 Tupaia belangeri ENSTBEG00000014637 I
RFX7 Taeniopygia guttata ENSTGUG00000006356 I
rfx5 Tetraodon nigroviridis ENSTNIG00000005388 I
rfx7 Tetraodon nigroviridis ENSTNIG00000009322 I
RFX7 Tetraodon nigroviridis ENSTNIG00000013706 I
RFX7 Takifugu rubripes ENSTRUG00000008008 I
rfx7 Takifugu rubripes ENSTRUG00000017897 I
ENSTSYG00000002441 Tarsius syrichta ENSTSYG00000002441 I
ENSTSYG00000003230 Tarsius syrichta ENSTSYG00000003230 I
ENSTSYG00000008562 Tarsius syrichta ENSTSYG00000008562 I
RFX5 Tursiops truncatus ENSTTRG00000007023 I
RFX7 Tursiops truncatus ENSTTRG00000010051 I
RFX7 Vicugna pacos ENSVPAG00000012402 I
ENSXMAG00000003651 Xiphophorus maculatus ENSXMAG00000003651 I
ENSXMAG00000006676 Xiphophorus maculatus ENSXMAG00000006676 I
ENSXMAG00000017295 Xiphophorus maculatus ENSXMAG00000017295 I
CG9727 Drosophila melanogaster FBgn0037445 I
GA21990 Drosophila pseudoobscura FBgn0081975 I
GF16654 Drosophila ananassae FBgn0093675 I
GG10435 Drosophila erecta FBgn0102744 I
GH18082 Drosophila grimshawi FBgn0125550 I
GI24583 Drosophila mojavensis FBgn0147305 I
GL22063 Drosophila persimilis FBgn0159655 I
GM10553 Drosophila sechellia FBgn0165499 I
GD19544 Drosophila simulans FBgn0191039 I
GJ22650 Drosophila virilis FBgn0209754 I
GK13786 Drosophila willistoni FBgn0215794 I
GE24099 Drosophila yakuba FBgn0241238 I
GB49419 Apis mellifera GB49419 I
HMEL011744 Heliconius melpomene HMEL011744 I
ISCW001129 Ixodes scapularis ISCW001129 I
KAFR_0H03130 Kazachstania africana KAFR_0H03130 I
KGM_16732 Danaus plexippus KGM_16732 I
L798_03377 Zootermopsis nevadensis L798_03377 I
LotgiG138119 Lottia gigantea LotgiG138119 I
MCINX003210 Melitaea cinxia MCINX003210 I
NEMVEDRAFT_v1g25228 Nematostella vectensis NEMVEDRAFT_v1g25228 I
NV23037 Nasonia vitripennis NV23037 I
PHUM035280 Pediculus humanus PHUM035280 I
SINV24627 Solenopsis invicta SINV24627 I
Smp_040350 Schistosoma mansoni Smp_040350 I
sak1 Schizosaccharomyces pombe SPAC3G9.14 I
SPU_027998 Strongylocentrotus purpuratus SPU_027998 I
TC008959 Tribolium castaneum TC008959 I
tetur02g00620 Tetranychus urticae tetur02g00620 I
TriadG51266 Trichoplax adhaerens TriadG51266 I
TriadG51992 Trichoplax adhaerens TriadG51992 I
Aan_R010941 Calypte anna Aan_R010941 I
Aan_R011989 Calypte anna Aan_R011989 I
Afo_R007667 Aptenodytes forsteri Afo_R007667 I
Afo_R011605 Aptenodytes forsteri Afo_R011605 I
Alligator_sinensis_CCG008945.1 Alligator sinensis Alligator_sinensis_CCG008945.1 I
Alligator_sinensis_CCG020683.1 Alligator sinensis Alligator_sinensis_CCG020683.1 I
Brh_R008414 Buceros rhinoceros Brh_R008414 I
Cflo_11342--XP_001120516.1_APIME Camponotus floridanus Cflo_11342--XP_001120516.1_APIME I
Cmyd_10007628 Chelonia mydas Cmyd_10007628 I
Cmyd_10014217 Chelonia mydas Cmyd_10014217 I
ENSMMUP00000033587 Macaca fascicularis ENSMMUP00000033587 I
ENSP00000389130-D1 Bos grunniens ENSP00000389130-D1 I
ENSP00000389130 Macaca fascicularis ENSP00000389130 I
ENSP00000397644-D1 Bos grunniens ENSP00000397644-D1 I
Gfo_R003263 Geospiza fortis Gfo_R003263 I
Gfo_R004305 Geospiza fortis Gfo_R004305 I
Hsal_12778--XP_001120516.1_APIME Harpegnathos saltator Hsal_12778--XP_001120516.1_APIME I
Myotis_brandtii_RFX5_10008035 Myotis brandtii Myotis_brandtii_RFX5_10008035 I
Myotis_brandtii_RFX7_10006263 Myotis brandtii Myotis_brandtii_RFX7_10006263 I
Ogr11408 Ophisaurus gracilis Ogr11408 I
Ogr13052 Ophisaurus gracilis Ogr13052 I
Pvit_04986 Pogona vitticeps Pvit_04986 I
Pvit_17399 Pogona vitticeps Pvit_17399 I
e_gw.237.152.1 Branchiostoma floridae e_gw.237.152.1 I
fgenesh2_pg.scaffold_3000303 Monosiga brevicollis fgenesh2_pg.scaffold_3000303 I
Ocbimv22017482m.g Octopus bimaculoides Ocbimv22017482m.g I
CLEC011984 Cimex lectularius CLEC011984 I
LCUP014592 Lucilia cuprina LCUP014592 I
LDEC011897 Leptinotarsa decemlineata LDEC011897 I
Sjc_0019090 Schistosoma japonicum Sjc_0019090 I
SMU15027042 Schmidtea mediterranea SMU15027042 I
rfx7 Xenopus tropicalis XB-GENE-1008447 I
rfx5 Xenopus tropicalis XB-GENE-5942579 I
rfx5.S Xenopus laevis XB-GENE-6079297 I
XP_002167798.1 Hydra magnipapillata XP_002167798.1 I
AALB008384 Anopheles albimanus AALB008384 I
AARA004226 Anopheles arabiensis AARA004226 I
AATE016751 Anopheles atroparvus AATE016751 I
ACHR008891 Anopheles christyi ACHR008891 I
ACOM036649 Anopheles coluzzii ACOM036649 I
ACUA017169 Anopheles culicifacies ACUA017169 I
ADIR010232 Anopheles dirus ADIR010232 I
AEPI006624 Anopheles epiroticus AEPI006624 I
AFAF011654 Anopheles farauti AFAF011654 I
AFUN011072 Anopheles funestus AFUN011072 I
AMEC002251 Anopheles melas AMEC002251 I
AMEM009524 Anopheles merus AMEM009524 I
AMIN003942 Anopheles minimus AMIN003942 I
AQUA006870 Anopheles quadriannulatus AQUA006870 I
ASIS020285 Anopheles sinensis ASIS020285 I
ASTEI04100 Anopheles stephensi ASTEI04100 I
MDOA009335 Musca domestica MDOA009335 I
A_01977 Schistosoma haematobium A_01977 I
csin102559 Clonorchis sinensis csin102559 I
D915_00887 Fasciola hepatica D915_00887 I
ECANG7_06078 Echinococcus canadensis ECANG7_06078 I
ECPE_0001841201 Echinostoma caproni ECPE_0001841201 I
EmuJ_001055400 Echinococcus multilocularis EmuJ_001055400 I
HDID_0000095701 Hymenolepis diminuta HDID_0000095701 I
HmN_000672900 Hymenolepis microstoma HmN_000672900 I
HNAJ_0001122601 Hymenolepis nana HNAJ_0001122601 I
SCUD_0001838101 Schistosoma curassoni SCUD_0001838101 I
SROB_0001335501 Schistosoma rodhaini SROB_0001335501 I
T265_11740 Opisthorchis viverrini T265_11740 I
TsM_000553100 Taenia solium TsM_000553100 I
TTAC_0000027401 Hydatigera taeniaeformis TTAC_0000027401 I