orange1.1g009376m.g (Citrus sinensis)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 orange1.1g009376m.g T202933_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g009376m GRAS 166 536

Links

Other GRAS family TFs
Other Citrus sinensis TFs

97 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.19424s0023 Boechera stricta Bostr.19424s0023 N 0.753
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N 0.718
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.829
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.989
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.748
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.789
Carubv10015685m.g Capsella rubella Carubv10015685m.g N 0.721
Carubv10008830m.g Capsella rubella Carubv10008830m.g N 0.702
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N 0.702
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.789
Cagra.1158s0007 Capsella grandiflora Cagra.1158s0007 N 0.731
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.775
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.707
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.734
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.756
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.794
mgf013039m Mimulus guttatus mgf013039m N 0.707
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.813
cassava8885.m1 Manihot esculenta cassava8885.m1 N 0.756
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.786
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.839
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.794
29949.m000124 Ricinus communis 29949.m000124 N 0.845
27613.m000642 Ricinus communis 27613.m000642 N 0.786
Pm015021 Prunus mume Pm015021 N 0.851
MDP0000152670 Malus domestica MDP0000152670 N 0.851
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.748
LjSGA_018703.2 Lotus japonicus LjSGA_018703.2 N 0.713
PK15082.1 Cannabis sativa PK15082.1 N 0.718
PK09018.1 Cannabis sativa PK09018.1 N 0.813
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.759
Thhalv10002541m.g Eutrema salsugineum Thhalv10002541m.g N 0.724
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.867
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.772
MDP0000804652 Malus domestica MDP0000804652 N 0.848
MDP0000284679 Malus domestica MDP0000284679 N 0.759
MDP0000205236 Malus domestica MDP0000205236 N 0.759
Pm012019 Prunus mume Pm012019 N 0.770
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.745
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.811
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.818
Lus10003772.g Linum usitatissimum Lus10003772.g N 0.749
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.778
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.865
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.743
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.867
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.862
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.770
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.851
Bra018860 Brassica rapa Bra018860 N 0.707
OLONG_015869 Oryza longistaminata OLONG_015869 N 0.707
OGLUM10G07400 Oryza glumaepatula OGLUM10G07400 N 0.710
OBART10G07700 Oryza barthii OBART10G07700 N 0.710
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.843
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.856
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.856
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.713
Bra037509 Brassica rapa Bra037509 N 0.726
Bra036185 Brassica rapa Bra036185 N 0.770
Bra026077 Brassica rapa Bra026077 N 0.716
Bra020715 Brassica rapa Bra020715 N 0.775
OMERI10G05450 Oryza meridionalis OMERI10G05450 N 0.713
Bra015156 Brassica rapa Bra015156 N 0.717
Bo9g009260 Brassica oleracea Bo9g009260 N 0.772
Bo9g009240 Brassica oleracea Bo9g009240 N 0.760
Bo7g089080 Brassica oleracea Bo7g089080 N 0.751
Bo7g030310 Brassica oleracea Bo7g030310 N 0.729
Bo6g022330 Brassica oleracea Bo6g022330 N 0.707
Bo2g149670 Brassica oleracea Bo2g149670 N 0.775
BGIOSGA032058 Oryza indica BGIOSGA032058 N 0.707
PAT1 Arabidopsis thaliana AT5G48150 N 0.786
SCL21 Arabidopsis thaliana AT2G04890 N 0.732
SCL5 Arabidopsis thaliana AT1G50600 N 0.710
SCL21 Arabidopsis lyrata scaffold_303269.1 N 0.742
Cla004565 Citrullus lanatus Cla004565 N 0.705
Cla001429 Citrullus lanatus Cla001429 N 0.824
Ca_09786 Cicer arietinum Ca_09786 N 0.832
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.772
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.848
SCL13 Vitis vinifera VIT_00s0463g00020 N 0.713
TCM_030733 Theobroma cacao TCM_030733 N 0.796
TCM_002319 Theobroma cacao TCM_002319 N 0.875
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.748
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.829
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.772
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.724
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.751
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.856
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.865
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.762
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N 0.743
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.832
CIGR2 Oryza sativa OS07G0583600 N 0.713
ORUFI10G08100 Oryza rufipogon ORUFI10G08100 N 0.710
ORGLA10G0063900 Oryza glaberrima ORGLA10G0063900 N 0.710
OPUNC10G06730 Oryza punctata OPUNC10G06730 N 0.702
ONIVA10G07150 Oryza nivara ONIVA10G07150 N 0.705