Cucsa.166030 (Cucumis sativus)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Cucsa.166030 T246509_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.166030.1 LOB 52 150

Links

Other LOB family TFs
Other Cucumis sativus TFs

209 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AC214648.3_FG005 Zea mays AC214648.3_FG005 I 0.798
BGIOSGA018905 Oryza indica BGIOSGA018905 I 0.789
F775_08326 Aegilops tauschii F775_08326 I 0.707
GLYMA02G43030 Glycine max GLYMA02G43030 I 0.707
GLYMA08G17990 Glycine max GLYMA08G17990 I 0.707
GLYMA10G35760 Glycine max GLYMA10G35760 I 0.949
GLYMA12G07650 Glycine max GLYMA12G07650 I 0.879
GLYMA13G40370 Glycine max GLYMA13G40370 I 0.869
GLYMA14G06140 Glycine max GLYMA14G06140 I 0.707
GLYMA15G05030 Glycine max GLYMA15G05030 I 0.869
GLYMA18G06530 Glycine max GLYMA18G06530 I 0.717
GLYMA20G31780 Glycine max GLYMA20G31780 I 0.949
GSMUA_Achr10G22970_001 Musa acuminata GSMUA_Achr10G22970_001 I 0.859
GSMUA_Achr6G33070_001 Musa acuminata GSMUA_Achr6G33070_001 I 0.828
GSMUA_Achr7G15500_001 Musa acuminata GSMUA_Achr7G15500_001 I 0.869
MLOC_5148 Hordeum vulgare MLOC_5148 I 0.707
MTR_1g095850 Medicago truncatula MTR_1g095850 I 0.939
MTR_2g068760 Medicago truncatula MTR_2g068760 I 0.707
MTR_2g093310 Medicago truncatula MTR_2g093310 I 0.859
MTR_4g060950 Medicago truncatula MTR_4g060950 I 0.879
OB05G11740 Oryza brachyantha OB05G11740 I 0.848
ONIVA05G01850 Oryza nivara ONIVA05G01850 I 0.737
ORUFI05G01750 Oryza rufipogon ORUFI05G01750 I 0.789
OS03G0659700 Oryza sativa OS03G0659700 I 0.702
OS05G0123000 Oryza sativa OS05G0123000 I 0.789
PGSC0003DMG400007503 Solanum tuberosum PGSC0003DMG400007503 I 0.889
PGSC0003DMG400025400 Solanum tuberosum PGSC0003DMG400025400 I 0.897
PGSC0003DMG400030456 Solanum tuberosum PGSC0003DMG400030456 I 0.717
POPTR_0005s10050 Populus trichocarpa POPTR_0005s10050 I 0.731
POPTR_0008s04350 Populus trichocarpa POPTR_0008s04350 I 0.879
POPTR_0010s22470 Populus trichocarpa POPTR_0010s22470 I 0.889
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I 0.889
PRUPE_ppa012504mg Prunus persica PRUPE_ppa012504mg I 0.717
PRUPE_ppa023989mg Prunus persica PRUPE_ppa023989mg I 0.889
Sb05g000550 Sorghum bicolor Sb05g000550 I 0.727
Sb08g000575 Sorghum bicolor Sb08g000575 I 0.708
Sb09g002190 Sorghum bicolor Sb09g002190 I 0.828
Si026864m.g Setaria italica Si026864m.g I 0.717
Solyc05g048740.2 Solanum lycopersicum Solyc05g048740.2 I 0.899
Solyc06g005090.2 Solanum lycopersicum Solyc06g005090.2 I 0.899
Solyc06g082310.2 Solanum lycopersicum Solyc06g082310.2 I 0.717
Solyc11g072470.1 Solanum lycopersicum Solyc11g072470.1 I 0.899
TCM_041094 Theobroma cacao TCM_041094 I 0.889
TCM_043081 Theobroma cacao TCM_043081 I 0.889
Traes_5BL_CE4CF3B5C Triticum aestivum Traes_5BL_CE4CF3B5C I 0.707
TRIUR3_11082 Triticum urartu TRIUR3_11082 I 0.707
VIT_06s0004g03330 Vitis vinifera VIT_06s0004g03330 I 0.869
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I 0.899
VIT_13s0019g03700 Vitis vinifera VIT_13s0019g03700 I 0.889
Ca_04287 Cicer arietinum Ca_04287 I 0.939
Ca_13575 Cicer arietinum Ca_13575 I 0.707
Ca_14605 Cicer arietinum Ca_14605 I 0.879
Cla000556 Citrullus lanatus Cla000556 I 0.879
Cla020379 Citrullus lanatus Cla020379 I 0.980
Pm000938 Prunus mume Pm000938 I 0.869
Pm018585 Prunus mume Pm018585 I 0.879
Pm018982 Prunus mume Pm018982 I 0.707
30111.m000703 Ricinus communis 30111.m000703 I 0.889
cassava11218.m1 Manihot esculenta cassava11218.m1 I 0.889
cassava40961.m1 Manihot esculenta cassava40961.m1 I 0.919
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I 0.889
Cucsa.052720 Cucumis sativus Cucsa.052720 I 0.869
mgf018189m Mimulus guttatus mgf018189m I 0.727
Ciclev10006113m.g Citrus clementina Ciclev10006113m.g I 0.707
Ciclev10029283m.g Citrus clementina Ciclev10029283m.g I 0.899
Ciclev10032772m.g Citrus clementina Ciclev10032772m.g I 0.808
Ciclev10032929m.g Citrus clementina Ciclev10032929m.g I 0.707
Ciclev10033956m.g Citrus clementina Ciclev10033956m.g I 0.909
Eucgr.B02465 Eucalyptus grandis Eucgr.B02465 I 0.879
Eucgr.B03991 Eucalyptus grandis Eucgr.B03991 I 0.707
Eucgr.F04424 Eucalyptus grandis Eucgr.F04424 I 0.707
Eucgr.J00175 Eucalyptus grandis Eucgr.J00175 I 0.707
Eucgr.J01123 Eucalyptus grandis Eucgr.J01123 I 0.879
evm.TU.supercontig_19.133 Carica papaya evm.TU.supercontig_19.133 I 0.707
gene21039-v1.0-hybrid Fragaria vesca gene21039-v1.0-hybrid I 0.717
gene25294-v1.0-hybrid Fragaria vesca gene25294-v1.0-hybrid I 0.869
Gorai.001G129700 Gossypium raimondii Gorai.001G129700 I 0.889
Gorai.004G012800 Gossypium raimondii Gorai.004G012800 I 0.869
Gorai.006G120900 Gossypium raimondii Gorai.006G120900 I 0.889
Gorai.010G195100 Gossypium raimondii Gorai.010G195100 I 0.707
Gorai.010G203800 Gossypium raimondii Gorai.010G203800 I 0.909
Gorai.013G002900 Gossypium raimondii Gorai.013G002900 I 0.869
Lus10011645.g Linum usitatissimum Lus10011645.g I 0.818
Lus10031191.g Linum usitatissimum Lus10031191.g I 0.707
Lus10036130.g Linum usitatissimum Lus10036130.g I 0.818
Lus10040373.g Linum usitatissimum Lus10040373.g I 0.919
MDP0000123013 Malus domestica MDP0000123013 I 0.879
MDP0000151784 Malus domestica MDP0000151784 I 0.879
MDP0000218986 Malus domestica MDP0000218986 I 0.848
MDP0000318244 Malus domestica MDP0000318244 I 0.848
MDP0000319331 Malus domestica MDP0000319331 I 0.869
MDP0000822986 Malus domestica MDP0000822986 I 0.838
orange1.1g026556m.g Citrus sinensis orange1.1g026556m.g I 0.909
orange1.1g036782m.g Citrus sinensis orange1.1g036782m.g I 0.707
orange1.1g038565m.g Citrus sinensis orange1.1g038565m.g I 0.710
orange1.1g044340m.g Citrus sinensis orange1.1g044340m.g I 0.707
orange1.1g045080m.g Citrus sinensis orange1.1g045080m.g I 0.808
orange1.1g047491m.g Citrus sinensis orange1.1g047491m.g I 0.899
Pavir.Ca00718 Panicum virgatum Pavir.Ca00718 I 0.818
Pavir.J04684 Panicum virgatum Pavir.J04684 I 0.818
Pavir.J06256 Panicum virgatum Pavir.J06256 I 0.717
Pavir.J13923 Panicum virgatum Pavir.J13923 I 0.717
Pavir.J18260 Panicum virgatum Pavir.J18260 I 0.717
SapurV1A.0023s0430 Salix purpurea SapurV1A.0023s0430 I 0.889
SapurV1A.0038s0110 Salix purpurea SapurV1A.0038s0110 I 0.899
SapurV1A.0085s0450 Salix purpurea SapurV1A.0085s0450 I 0.717
SapurV1A.0284s0080 Salix purpurea SapurV1A.0284s0080 I 0.707
PK17019.1 Cannabis sativa PK17019.1 I 0.794
PK23777.1 Cannabis sativa PK23777.1 I 0.899
PK27389.1 Cannabis sativa PK27389.1 I 0.889
CM1887.100.nc Lotus japonicus CM1887.100.nc I 0.949
LjSGA_079580.1.1 Lotus japonicus LjSGA_079580.1.1 I 0.712
PDK_20s1376911g004 Phoenix dactylifera PDK_20s1376911g004 I 0.815
AMTR_s00080p00153120 Amborella trichopoda AMTR_s00080p00153120 N 0.879
LBD11 Arabidopsis thaliana AT2G28500 N 0.859
BGIOSGA010952 Oryza indica BGIOSGA010952 N 0.778
BGIOSGA038947 Oryza indica BGIOSGA038947 N 0.778
Bo01039s010 Brassica oleracea Bo01039s010 N 0.869
Bo3g040220 Brassica oleracea Bo3g040220 N 0.838
Bo4g165420 Brassica oleracea Bo4g165420 N 0.859
Bo5g008590 Brassica oleracea Bo5g008590 N 0.838
Bo8g112780 Brassica oleracea Bo8g112780 N 0.838
Bra000491 Brassica rapa Bra000491 N 0.838
Bra011942 Brassica rapa Bra011942 N 0.869
Bra018675 Brassica rapa Bra018675 N 0.838
Bra031599 Brassica rapa Bra031599 N 0.818
Bra035698 Brassica rapa Bra035698 N 0.859
BRADI1G65760 Brachypodium distachyon BRADI1G65760 N 0.747
F775_02335 Aegilops tauschii F775_02335 N 0.747
LBD1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000623 N 0.859
LBD11 Arabidopsis lyrata fgenesh2_kg.4__820__AT2G28500.1 N 0.869
GLYMA11G15810 Glycine max GLYMA11G15810 N 0.869
GRMZM2G021095 Zea mays GRMZM2G021095 N 0.788
GRMZM2G145568 Zea mays GRMZM2G145568 N 0.778
GRMZM2G165805 Zea mays GRMZM2G165805 N 0.818
GSMUA_Achr3G17800_001 Musa acuminata GSMUA_Achr3G17800_001 N 0.758
GSMUA_Achr4G16790_001 Musa acuminata GSMUA_Achr4G16790_001 N 0.798
GSMUA_Achr8G09700_001 Musa acuminata GSMUA_Achr8G09700_001 N 0.818
GSMUA_Achr9G04330_001 Musa acuminata GSMUA_Achr9G04330_001 N 0.737
LPERR03G11720 Leersia perrieri LPERR03G11720 N 0.758
LPERR05G01520 Leersia perrieri LPERR05G01520 N 0.848
MLOC_68570 Hordeum vulgare MLOC_68570 N 0.828
OB03G23270 Oryza brachyantha OB03G23270 N 0.768
OBART03G13260 Oryza barthii OBART03G13260 N 0.778
OBART05G01640 Oryza barthii OBART05G01640 N 0.788
OGLUM03G13350 Oryza glumaepatula OGLUM03G13350 N 0.778
OMERI03G12370 Oryza meridionalis OMERI03G12370 N 0.778
OMERI05G01730 Oryza meridionalis OMERI05G01730 N 0.750
ONIVA03G14510 Oryza nivara ONIVA03G14510 N 0.778
OPUNC03G12790 Oryza punctata OPUNC03G12790 N 0.778
OPUNC05G01600 Oryza punctata OPUNC05G01600 N 0.763
OPUNC05G01610 Oryza punctata OPUNC05G01610 N 0.804
ORGLA03G0128100 Oryza glaberrima ORGLA03G0128100 N 0.778
ORGLA05G0016500 Oryza glaberrima ORGLA05G0016500 N 0.838
ORUFI03G13900 Oryza rufipogon ORUFI03G13900 N 0.778
OS03G0287400 Oryza sativa OS03G0287400 N 0.778
PGSC0003DMG400004138 Solanum tuberosum PGSC0003DMG400004138 N 0.838
PGSC0003DMG400025384 Solanum tuberosum PGSC0003DMG400025384 N 0.747
Sb01g038650 Sorghum bicolor Sb01g038650 N 0.788
Si024430m.g Setaria italica Si024430m.g N 0.798
Si037280m.g Setaria italica Si037280m.g N 0.778
Solyc04g050010.1 Solanum lycopersicum Solyc04g050010.1 N 0.859
Solyc06g075330.1 Solanum lycopersicum Solyc06g075330.1 N 0.841
Traes_1AS_26CB95294 Triticum aestivum Traes_1AS_26CB95294 N 0.828
Traes_1BS_CE38938A8 Triticum aestivum Traes_1BS_CE38938A8 N 0.828
Traes_1DS_A31FB6CB2 Triticum aestivum Traes_1DS_A31FB6CB2 N 0.828
Traes_4AS_669BAF6C7 Triticum aestivum Traes_4AS_669BAF6C7 N 0.737
Traes_4BL_97EDABD02 Triticum aestivum Traes_4BL_97EDABD02 N 0.747
VIT_13s0019g03710 Vitis vinifera VIT_13s0019g03710 N 0.737
VIT_13s0019g03720 Vitis vinifera VIT_13s0019g03720 N 0.717
VIT_13s0019g03750 Vitis vinifera VIT_13s0019g03750 N 0.778
VIT_13s0019g03760 Vitis vinifera VIT_13s0019g03760 N 0.717
VIT_13s0019g03780 Vitis vinifera VIT_13s0019g03780 N 0.707
VIT_13s0019g03800 Vitis vinifera VIT_13s0019g03800 N 0.759
VIT_13s0019g03810 Vitis vinifera VIT_13s0019g03810 N 0.727
VIT_13s0019g03830 Vitis vinifera VIT_13s0019g03830 N 0.707
Ca_02507 Cicer arietinum Ca_02507 N 0.798
Cla005133 Citrullus lanatus Cla005133 N 0.768
Cla005134 Citrullus lanatus Cla005134 N 0.838
cassava16668.m1 Manihot esculenta cassava16668.m1 N 0.809
cassava41200.m1 Manihot esculenta cassava41200.m1 N 0.717
cassava44959.m1 Manihot esculenta cassava44959.m1 N 0.859
Cucsa.207390 Cucumis sativus Cucsa.207390 N 0.727
Cucsa.207400 Cucumis sativus Cucsa.207400 N 0.808
Cucsa.275710 Cucumis sativus Cucsa.275710 N 0.737
Cucsa.358620 Cucumis sativus Cucsa.358620 N 0.750
mgf015666m Mimulus guttatus mgf015666m N 0.889
mgf019622m Mimulus guttatus mgf019622m N 0.828
mgf022524m Mimulus guttatus mgf022524m N 0.869
Aquca_027_00112 Aquilegia coerulea Aquca_027_00112 N 0.828
Bostr.25219s0157 Boechera stricta Bostr.25219s0157 N 0.879
Bostr.27991s0074 Boechera stricta Bostr.27991s0074 N 0.869
Cagra.1671s0410 Capsella grandiflora Cagra.1671s0410 N 0.848
Cagra.9128s0007 Capsella grandiflora Cagra.9128s0007 N 0.869
Carubv10010390m.g Capsella rubella Carubv10010390m.g N 0.859
Carubv10023989m.g Capsella rubella Carubv10023989m.g N 0.869
Ciclev10032782m.g Citrus clementina Ciclev10032782m.g N 0.859
Eucgr.E02410 Eucalyptus grandis Eucgr.E02410 N 0.775
evm.TU.contig_40341.2 Carica papaya evm.TU.contig_40341.2 N 0.761
evm.TU.supercontig_53.26 Carica papaya evm.TU.supercontig_53.26 N 0.909
gene23226-v1.0-hybrid Fragaria vesca gene23226-v1.0-hybrid N 0.879
Gorai.012G094200 Gossypium raimondii Gorai.012G094200 N 0.848
Gorai.012G185900 Gossypium raimondii Gorai.012G185900 N 0.792
MDP0000879799 Malus domestica MDP0000879799 N 0.848
Pavir.Ia03612 Panicum virgatum Pavir.Ia03612 N 0.788
Pavir.Ib01336 Panicum virgatum Pavir.Ib01336 N 0.788
Thhalv10008781m.g Eutrema salsugineum Thhalv10008781m.g N 0.869
Thhalv10017165m.g Eutrema salsugineum Thhalv10017165m.g N 0.859
chr3.CM0246.260.nc Lotus japonicus chr3.CM0246.260.nc N 0.869