H101_08129 (Trichophyton interdigitale)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 H101_08129 T254436_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		0.729 0.729
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		0.729 0.729
RLM1
M08590_2.00 		Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN		 Misc
DeBoer et al.(2011)
YPL089C_419 		0.729 0.729
RLM1
M08459_2.00 		Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN		 COMPILED
Mathelier et al.(2014)
MA0369.1 		0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EZF28189 MADS box 10 57

Links

Other MADS box family TFs
Other Trichophyton interdigitale TFs

229 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
FAR1 Arabidopsis thaliana AT4G15090 D
FHY3 Arabidopsis thaliana AT3G22170 D
mgf008053m Mimulus guttatus mgf008053m I
PK08903.1 Cannabis sativa PK08903.1 I
mgf009829m Mimulus guttatus mgf009829m I
mgf014333m Mimulus guttatus mgf014333m I
Bostr.0597s0142 Boechera stricta Bostr.0597s0142 I
Bostr.19424s0443 Boechera stricta Bostr.19424s0443 I
Cagra.1850s0019 Capsella grandiflora Cagra.1850s0019 I
Cagra.2420s0008 Capsella grandiflora Cagra.2420s0008 I
Carubv10004178m.g Capsella rubella Carubv10004178m.g I
Carubv10012703m.g Capsella rubella Carubv10012703m.g I
Carubv10013009m.g Capsella rubella Carubv10013009m.g I
Eucgr.A00908 Eucalyptus grandis Eucgr.A00908 I
Eucgr.C04090 Eucalyptus grandis Eucgr.C04090 I
evm.TU.supercontig_8.288 Carica papaya evm.TU.supercontig_8.288 I
gene24214-v1.0-hybrid Fragaria vesca gene24214-v1.0-hybrid I
gene24215-v1.0-hybrid Fragaria vesca gene24215-v1.0-hybrid I
Gorai.005G134200 Gossypium raimondii Gorai.005G134200 I
Gorai.007G173400 Gossypium raimondii Gorai.007G173400 I
MDP0000286803 Malus domestica MDP0000286803 I
SapurV1A.0154s0240 Salix purpurea SapurV1A.0154s0240 I
SapurV1A.0767s0090 Salix purpurea SapurV1A.0767s0090 I
SapurV1A.0767s0100 Salix purpurea SapurV1A.0767s0100 I
Thhalv10020053m.g Eutrema salsugineum Thhalv10020053m.g I
Thhalv10024410m.g Eutrema salsugineum Thhalv10024410m.g I
PK04639.1 Cannabis sativa PK04639.1 I
Solyc08g060840.1 Solanum lycopersicum Solyc08g060840.1 I
Bo6g054750 Brassica oleracea Bo6g054750 I
Bra040696 Brassica rapa Bra040696 I
GLYMA04G14850 Glycine max GLYMA04G14850 I
GLYMA06G47210 Glycine max GLYMA06G47210 I
GLYMA10G40510 Glycine max GLYMA10G40510 I
GLYMA20G26810 Glycine max GLYMA20G26810 I
POPTR_0006s02140 Populus trichocarpa POPTR_0006s02140 I
POPTR_0006s02150 Populus trichocarpa POPTR_0006s02150 I
POPTR_0016s01980 Populus trichocarpa POPTR_0016s01980 I
PRUPE_ppa001344mg Prunus persica PRUPE_ppa001344mg I
PRUPE_ppa001511mg Prunus persica PRUPE_ppa001511mg I
Solyc07g043270.2 Solanum lycopersicum Solyc07g043270.2 I
Cucsa.180090 Cucumis sativus Cucsa.180090 I
TCM_002030 Theobroma cacao TCM_002030 I
TCM_013043 Theobroma cacao TCM_013043 I
FHY3 Vitis vinifera VIT_03s0017g01780 I
FAR1 Vitis vinifera VIT_03s0017g01810 I
Pm014858 Prunus mume Pm014858 I
Pm014859 Prunus mume Pm014859 I
cassava24584.valid.m1 Manihot esculenta cassava24584.valid.m1 I
cassava31125.valid.m1 Manihot esculenta cassava31125.valid.m1 I
cassava31126.valid.m1 Manihot esculenta cassava31126.valid.m1 I
cassava31127.valid.m1 Manihot esculenta cassava31127.valid.m1 I
cassava31128.valid.m1 Manihot esculenta cassava31128.valid.m1 I
Cucsa.180080 Cucumis sativus Cucsa.180080 I