Solyc11g069030.1 (Solanum lycopersicum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Solyc11g069030.1 T280284_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAX3
M02700_2.00 		Arabidopsis thaliana
SCACCTACCHCCN
NGGDGGTAGGTGS		 SELEX
Mathelier et al.(2014)
MA0576.1 		0.729 0.796
RAX3
M11043_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB84_01 		0.729 0.796
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc11g069030.1.1 Myb 14 62
Solyc11g069030.1.1 Myb 68 113

Links

Other Myb/SANT family TFs
Other Solanum lycopersicum TFs

433 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N
SCL5 Arabidopsis thaliana AT1G50600 N
PAT1 Arabidopsis thaliana AT5G48150 N
BGIOSGA026022 Oryza indica BGIOSGA026022 N
BGIOSGA032058 Oryza indica BGIOSGA032058 N
Bo2g149670 Brassica oleracea Bo2g149670 N
Bo6g022330 Brassica oleracea Bo6g022330 N
Bo7g089080 Brassica oleracea Bo7g089080 N
Bo9g009260 Brassica oleracea Bo9g009260 N
Bra018860 Brassica rapa Bra018860 N
Bra020715 Brassica rapa Bra020715 N
Bra036185 Brassica rapa Bra036185 N
BRADI1G23350 Brachypodium distachyon BRADI1G23350 N
F775_15940 Aegilops tauschii F775_15940 N
F775_28371 Aegilops tauschii F775_28371 N
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N
GLYMA02G47640 Glycine max GLYMA02G47640 N
GLYMA14G01020 Glycine max GLYMA14G01020 N
GRMZM2G098517 Zea mays GRMZM2G098517 N
GRMZM2G431309 Zea mays GRMZM2G431309 N
GSMUA_Achr8G03610_001 Musa acuminata GSMUA_Achr8G03610_001 N
LPERR07G17460 Leersia perrieri LPERR07G17460 N
LPERR10G05390 Leersia perrieri LPERR10G05390 N
MLOC_65838 Hordeum vulgare MLOC_65838 N
MTR_5g097480 Medicago truncatula MTR_5g097480 N
OB07G25870 Oryza brachyantha OB07G25870 N
OB10G15940 Oryza brachyantha OB10G15940 N
OBART07G20130 Oryza barthii OBART07G20130 N
OBART10G07700 Oryza barthii OBART10G07700 N
OGLUM07G19910 Oryza glumaepatula OGLUM07G19910 N
OGLUM10G07400 Oryza glumaepatula OGLUM10G07400 N
OLONG_015869 Oryza longistaminata OLONG_015869 N
OMERI07G16830 Oryza meridionalis OMERI07G16830 N
OMERI10G05450 Oryza meridionalis OMERI10G05450 N
ONIVA07G18570 Oryza nivara ONIVA07G18570 N
ONIVA10G07150 Oryza nivara ONIVA10G07150 N
OPUNC07G19030 Oryza punctata OPUNC07G19030 N
OPUNC10G06730 Oryza punctata OPUNC10G06730 N
ORGLA07G0258500 Oryza glaberrima ORGLA07G0258500 N
ORGLA10G0063900 Oryza glaberrima ORGLA10G0063900 N
ORUFI07G20980 Oryza rufipogon ORUFI07G20980 N
ORUFI10G08100 Oryza rufipogon ORUFI10G08100 N
CIGR2 Oryza sativa OS07G0583600 N
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N
SCL5 Populus trichocarpa POPTR_0001s37270 N
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N
Sb02g037650 Sorghum bicolor Sb02g037650 N
PAT1 Arabidopsis lyrata scaffold_801100.1 N
Si029418m.g Setaria italica Si029418m.g N
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N
TCM_002319 Theobroma cacao TCM_002319 N
TCM_030733 Theobroma cacao TCM_030733 N
Traes_2BS_D007D6598 Triticum aestivum Traes_2BS_D007D6598 N
Traes_2DS_CCA2FCCAD Triticum aestivum Traes_2DS_CCA2FCCAD N
Traes_5BL_A7C4DAE11 Triticum aestivum Traes_5BL_A7C4DAE11 N
Traes_5DL_B89CD8432 Triticum aestivum Traes_5DL_B89CD8432 N
SCL13 Vitis vinifera VIT_00s0463g00020 N
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N
SCL5 Vitis vinifera VIT_19s0090g01740 N
Ca_09786 Cicer arietinum Ca_09786 N
Cla001429 Citrullus lanatus Cla001429 N
Cla004565 Citrullus lanatus Cla004565 N
Pm012019 Prunus mume Pm012019 N
Pm015021 Prunus mume Pm015021 N
27613.m000642 Ricinus communis 27613.m000642 N
29949.m000124 Ricinus communis 29949.m000124 N
cassava10826.m1 Manihot esculenta cassava10826.m1 N
cassava34699.m1 Manihot esculenta cassava34699.m1 N
Cucsa.042310 Cucumis sativus Cucsa.042310 N
Cucsa.120390 Cucumis sativus Cucsa.120390 N
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N
Carubv10008830m.g Capsella rubella Carubv10008830m.g N
Carubv10026289m.g Capsella rubella Carubv10026289m.g N
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N
Lus10003772.g Linum usitatissimum Lus10003772.g N
Lus10006369.g Linum usitatissimum Lus10006369.g N
Lus10012323.g Linum usitatissimum Lus10012323.g N
Lus10016596.g Linum usitatissimum Lus10016596.g N
MDP0000152670 Malus domestica MDP0000152670 N
MDP0000205236 Malus domestica MDP0000205236 N
MDP0000284679 Malus domestica MDP0000284679 N
MDP0000804652 Malus domestica MDP0000804652 N
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N
Pavir.Ba00562 Panicum virgatum Pavir.Ba00562 N
Pavir.Bb03224 Panicum virgatum Pavir.Bb03224 N
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N
PK09018.1 Cannabis sativa PK09018.1 N
PK15082.1 Cannabis sativa PK15082.1 N