cassava29163.valid.m1 (Manihot esculenta)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00313 (CSD) IPR002059 cassava29163.valid.m1 T165365_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava29163.valid.m1 CSD 6 72

Links

Other CSD family TFs
Other Manihot esculenta TFs

97 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00017p00206510 Amborella trichopoda AMTR_s00017p00206510 N 0.727
ATGRP2B Arabidopsis lyrata fgenesh2_kg.4__14__AT2G21060.1 I 0.712
AZW_EuGene.0000110131 Micromonas pusilla AZW_EuGene.0000110131 N 0.727
BGIOSGA007226 Oryza indica BGIOSGA007226 N 0.758
Bo3g141510 Brassica oleracea Bo3g141510 I 0.727
Bo4g145670 Brassica oleracea Bo4g145670 I 0.727
Bo7g049880 Brassica oleracea Bo7g049880 I 0.727
Bo8g102040 Brassica oleracea Bo8g102040 I 0.712
Bostr.18351s0255 Boechera stricta Bostr.18351s0255 N 0.712
Bostr.25542s0051 Boechera stricta Bostr.25542s0051 I 0.727
Bostr.7867s1467 Boechera stricta Bostr.7867s1467 N 0.712
Bra030325 Brassica rapa Bra030325 I 0.712
Bra031159 Brassica rapa Bra031159 I 0.712
BRADI1G02640 Brachypodium distachyon BRADI1G02640 N 0.727
BRADI1G02650 Brachypodium distachyon BRADI1G02650 N 0.742
BRADI2G07090 Brachypodium distachyon BRADI2G07090 N 0.712
BRADI3G01960 Brachypodium distachyon BRADI3G01960 N 0.803
Cagra.2961s0009 Capsella grandiflora Cagra.2961s0009 I 0.727
cassava12557.valid.m1 Manihot esculenta cassava12557.valid.m1 N 0.924
Ca_11038 Cicer arietinum Ca_11038 N 0.803
CHLREDRAFT_126810 Chlamydomonas reinhardtii CHLREDRAFT_126810 N 0.712
chr3.CM0112.180.nd Lotus japonicus chr3.CM0112.180.nd N 0.773
chr6.CM0045.280.nd Lotus japonicus chr6.CM0045.280.nd N 0.758
Cla016088 Citrullus lanatus Cla016088 N 0.788
CSP2 Arabidopsis thaliana AT4G38680 I 0.712
Cucsa.381750 Cucumis sativus Cucsa.381750 N 0.788
estExt_fgenesh1_pg.C_10541 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pg.C_10541 N 0.773
estExt_fgeneshCV_pm.C_10002 Chlorella vulgaris estExt_fgeneshCV_pm.C_10002 N 0.773
estExt_gwp_gw1.C_410063 Physcomitrella patens estExt_gwp_gw1.C_410063 N 0.773
estExt_gwp_gw1.C_640002 Physcomitrella patens estExt_gwp_gw1.C_640002 N 0.773
Eucgr.I01395 Eucalyptus grandis Eucgr.I01395 N 0.810
EuGene.0200010100 Micromonas sp RCC299 EuGene.0200010100 N 0.758
evm.TU.supercontig_37.170 Carica papaya evm.TU.supercontig_37.170 N 0.864
e_gw1.1.536.1 Chlorella vulgaris e_gw1.1.536.1 N 0.758
fgenesh1_pg.1_#_433 Coccomyxa subellipsoidea C169 fgenesh1_pg.1_#_433 N 0.758
gene07618-v1.0-hybrid Fragaria vesca gene07618-v1.0-hybrid N 0.848
gene14603-v1.0-hybrid Fragaria vesca gene14603-v1.0-hybrid N 0.712
gene26519-v1.0-hybrid Fragaria vesca gene26519-v1.0-hybrid N 0.742
GLYMA04G00660 Glycine max GLYMA04G00660 N 0.758
GLYMA11G11290 Glycine max GLYMA11G11290 N 0.788
GLYMA12G03470 Glycine max GLYMA12G03470 N 0.788
Gorai.002G003500 Gossypium raimondii Gorai.002G003500 N 0.773
Gorai.002G195000 Gossypium raimondii Gorai.002G195000 I 0.773
Gorai.002G195100 Gossypium raimondii Gorai.002G195100 I 0.773
Gorai.005G253200 Gossypium raimondii Gorai.005G253200 I 0.803
Gorai.008G062500 Gossypium raimondii Gorai.008G062500 N 0.712
GRMZM2G389768 Zea mays GRMZM2G389768 N 0.788
GRP2 Arabidopsis lyrata scaffold_700059.1 I 0.712
gw1.103.78.1 Physcomitrella patens gw1.103.78.1 N 0.773
IGS.gm_9_00317 Chlorella NC64A IGS.gm_9_00317 N 0.754
LPERR02G01370 Leersia perrieri LPERR02G01370 N 0.758
Lus10005066.g Linum usitatissimum Lus10005066.g N 0.864
Lus10025058.g Linum usitatissimum Lus10025058.g N 0.758
Lus10027839.g Linum usitatissimum Lus10027839.g N 0.864
MDP0000121628 Malus domestica MDP0000121628 N 0.788
MDP0000155077 Malus domestica MDP0000155077 N 0.803
MDP0000198079 Malus domestica MDP0000198079 N 0.758
MDP0000202739 Malus domestica MDP0000202739 N 0.803
MDP0000225222 Malus domestica MDP0000225222 N 0.818
MDP0000292743 Malus domestica MDP0000292743 N 0.727
MDP0000632148 Malus domestica MDP0000632148 N 0.758
mgf001526m Mimulus guttatus mgf001526m N 0.758
mgf014458m Mimulus guttatus mgf014458m N 0.758
mgf015980m Mimulus guttatus mgf015980m I 0.788
OBART02G01600 Oryza barthii OBART02G01600 N 0.758
OGLUM02G01470 Oryza glumaepatula OGLUM02G01470 N 0.758
OMERI02G00930 Oryza meridionalis OMERI02G00930 N 0.758
ONIVA02G01490 Oryza nivara ONIVA02G01490 N 0.773
OPUNC02G01060 Oryza punctata OPUNC02G01060 N 0.758
ORGLA02G0014700 Oryza glaberrima ORGLA02G0014700 N 0.758
ORUFI02G01580 Oryza rufipogon ORUFI02G01580 N 0.758
OS02G0121100 Oryza sativa OS02G0121100 N 0.758
Pavir.Ab00211 Panicum virgatum Pavir.Ab00211 N 0.762
Pavir.J33226 Panicum virgatum Pavir.J33226 N 0.788
Pavir.J33349 Panicum virgatum Pavir.J33349 N 0.788
PGSC0003DMG400001590 Solanum tuberosum PGSC0003DMG400001590 N 0.818
PGSC0003DMG400001591 Solanum tuberosum PGSC0003DMG400001591 N 0.727
PGSC0003DMG400023206 Solanum tuberosum PGSC0003DMG400023206 I 0.773
PK01533.1 Cannabis sativa PK01533.1 N 0.758
PK03316.1 Cannabis sativa PK03316.1 N 0.773
Pm020837 Prunus mume Pm020837 I 0.848
Pm026767 Prunus mume Pm026767 N 0.758
POPTR_0004s17840 Populus trichocarpa POPTR_0004s17840 N 0.833
POPTR_0009s13460 Populus trichocarpa POPTR_0009s13460 N 0.833
PRUPE_ppa010531mg Prunus persica PRUPE_ppa010531mg N 0.758
SapurV1A.0117s0150 Salix purpurea SapurV1A.0117s0150 N 0.864
SapurV1A.0514s0160 Salix purpurea SapurV1A.0514s0160 N 0.833
Sb04g001720 Sorghum bicolor Sb04g001720 N 0.788
SELMODRAFT_123455 Selaginella moellendorffii SELMODRAFT_123455 N 0.709
SELMODRAFT_154869 Selaginella moellendorffii SELMODRAFT_154869 N 0.712
SELMODRAFT_186937 Selaginella moellendorffii SELMODRAFT_186937 N 0.758
SELMODRAFT_187582 Selaginella moellendorffii SELMODRAFT_187582 N 0.758
Solyc01g111300.2 Solanum lycopersicum Solyc01g111300.2 N 0.788
Solyc10g055250.1 Solanum lycopersicum Solyc10g055250.1 I 0.758
Traes_6AS_539B381F1 Triticum aestivum Traes_6AS_539B381F1 N 0.758
VIT_03s0038g02130 Vitis vinifera VIT_03s0038g02130 I 0.894
VIT_04s0023g03520 Vitis vinifera VIT_04s0023g03520 N 0.803