AMTR_s00119p00117410 (Amborella trichopoda)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04873 (EIN3) IPR006957 AMTR_s00119p00117410 T174988_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.851 0.851
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.851 0.851
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.851 0.851
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.851 0.851
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.851 0.851
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.839 0.839
EIL3
M00723_2.00 		Arabidopsis thaliana
NAGRTWCATNN
NNATGWAYCTN		 PBM
Chang et al.(2013)
pTH7933 		0.726 0.726
EIL3
M06877_2.00 		Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH
DDNDWNHWTGWAYCTRGACRN		 Dap-seq
OMalley et al.(2016)
EIL3_col_b 		0.726 0.726
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERM97264 EIN3 49 298

Links

Other EIN3 family TFs
Other Amborella trichopoda TFs

189 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29708.m000185 Ricinus communis 29708.m000185 I 0.863
30169.m006395 Ricinus communis 30169.m006395 I 0.730
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.739
Aquca_007_00017 Aquilegia coerulea Aquca_007_00017 I 0.706
Aquca_014_00938 Aquilegia coerulea Aquca_014_00938 I 0.902
BGIOSGA012535 Oryza indica BGIOSGA012535 I 0.821
BGIOSGA023694 Oryza indica BGIOSGA023694 I 0.782
Bo1g108650 Brassica oleracea Bo1g108650 I 0.809
Bo3g041690 Brassica oleracea Bo3g041690 I 0.827
Bo3g076180 Brassica oleracea Bo3g076180 I 0.810
Bo5g106280 Brassica oleracea Bo5g106280 I 0.831
Bo6g087550 Brassica oleracea Bo6g087550 I 0.725
Bo6g118030 Brassica oleracea Bo6g118030 I 0.724
Bostr.19424s0573 Boechera stricta Bostr.19424s0573 I 0.854
Bostr.29505s0037 Boechera stricta Bostr.29505s0037 I 0.819
Bostr.3288s0016 Boechera stricta Bostr.3288s0016 I 0.718
Bra000528 Brassica rapa Bra000528 I 0.835
Bra001802 Brassica rapa Bra001802 I 0.819
Bra008110 Brassica rapa Bra008110 I 0.720
Bra015970 Brassica rapa Bra015970 I 0.714
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.819
Cagra.0876s0005 Capsella grandiflora Cagra.0876s0005 I 0.724
Cagra.2243s0007 Capsella grandiflora Cagra.2243s0007 I 0.854
Cagra.6016s0001 Capsella grandiflora Cagra.6016s0001 I 0.835
Carubv10013213m.g Capsella rubella Carubv10013213m.g I 0.854
Carubv10020043m.g Capsella rubella Carubv10020043m.g I 0.724
Carubv10022879m.g Capsella rubella Carubv10022879m.g I 0.835
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.737
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.874
Ca_02669 Cicer arietinum Ca_02669 I 0.737
Ca_07534 Cicer arietinum Ca_07534 I 0.866
Ca_10236 Cicer arietinum Ca_10236 I 0.863
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.871
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.737
Ciclev10000608m.g Citrus clementina Ciclev10000608m.g I 0.878
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.878
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 0.866
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.737
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.870
Cucsa.143220 Cucumis sativus Cucsa.143220 I 0.722
Cucsa.364340 Cucumis sativus Cucsa.364340 I 0.902
EIL1 Arabidopsis thaliana AT2G27050 D 0.842
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.843
EIL3 Arabidopsis thaliana AT1G73730 D 0.732
EIL3 Arabidopsis lyrata scaffold_202309.1 I 0.728
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.714
EIN3 Arabidopsis thaliana AT3G20770 D 0.858
EIN3 Arabidopsis lyrata fgenesh2_kg.3__2304__AT3G20770.1 I 0.854
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.737
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I 0.859
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.870
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.867
evm.TU.supercontig_54.30 Carica papaya evm.TU.supercontig_54.30 I 0.782
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.855
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.858
F775_28545 Aegilops tauschii F775_28545 I 0.817
gene00379-v1.0-hybrid Fragaria vesca gene00379-v1.0-hybrid I 0.874
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.737
gene25474-v1.0-hybrid Fragaria vesca gene25474-v1.0-hybrid I 0.847
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.866
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.855
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.875
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.757
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.878
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.749
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.882
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.866
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.855
Gorai.009G071400 Gossypium raimondii Gorai.009G071400 I 0.733
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.871
Gorai.010G128700 Gossypium raimondii Gorai.010G128700 I 0.714
Gorai.013G266300 Gossypium raimondii Gorai.013G266300 I 0.859
GRMZM2G003558 Zea mays GRMZM2G003558 I 0.730
GRMZM2G033570 Zea mays GRMZM2G033570 I 0.821
GRMZM2G151811 Zea mays GRMZM2G151811 I 0.765
GRMZM2G317584 Zea mays GRMZM2G317584 I 0.817
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.835
GSMUA_Achr11G25120_001 Musa acuminata GSMUA_Achr11G25120_001 I 0.769
GSMUA_Achr2G11540_001 Musa acuminata GSMUA_Achr2G11540_001 I 0.823
GSMUA_Achr3G09440_001 Musa acuminata GSMUA_Achr3G09440_001 I 0.763
GSMUA_Achr3G11160_001 Musa acuminata GSMUA_Achr3G11160_001 I 0.702
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.823
GSMUA_Achr6G15930_001 Musa acuminata GSMUA_Achr6G15930_001 I 0.843
GSMUA_Achr8G21550_001 Musa acuminata GSMUA_Achr8G21550_001 I 0.819
GSMUA_Achr9G17080_001 Musa acuminata GSMUA_Achr9G17080_001 I 0.781
LjSGA_055593.1 Lotus japonicus LjSGA_055593.1 I 0.737
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.819
LPERR07G23570 Leersia perrieri LPERR07G23570 I 0.734
Lus10031245.g Linum usitatissimum Lus10031245.g I 0.717
Lus10031817.g Linum usitatissimum Lus10031817.g I 0.718
MDP0000202831 Malus domestica MDP0000202831 I 0.878
MDP0000212881 Malus domestica MDP0000212881 I 0.874
MDP0000306498 Malus domestica MDP0000306498 I 0.867
MDP0000490180 Malus domestica MDP0000490180 I 0.726
MDP0000562585 Malus domestica MDP0000562585 I 0.726
MDP0000564884 Malus domestica MDP0000564884 I 0.874
MDP0000565880 Malus domestica MDP0000565880 I 0.726
mgf012394m Mimulus guttatus mgf012394m I 0.823
mgf015996m Mimulus guttatus mgf015996m I 0.813
mgf018950m Mimulus guttatus mgf018950m I 0.829
mgf020935m Mimulus guttatus mgf020935m I 0.709
MLOC_14619 Hordeum vulgare MLOC_14619 I 0.817
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.742
MTR_3g078770 Medicago truncatula MTR_3g078770 I 0.866
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.859
OB07G32250 Oryza brachyantha OB07G32250 I 0.700
OBART07G26760 Oryza barthii OBART07G26760 I 0.774
OGLUM03G15860 Oryza glumaepatula OGLUM03G15860 I 0.821
OLONG_004360 Oryza longistaminata OLONG_004360 I 0.733
OMERI03G14140 Oryza meridionalis OMERI03G14140 I 0.821
OMERI05G02190 Oryza meridionalis OMERI05G02190 I 0.788
OMERI07G23380 Oryza meridionalis OMERI07G23380 I 0.777
ONIVA03G16680 Oryza nivara ONIVA03G16680 I 0.821
ONIVA07G26490 Oryza nivara ONIVA07G26490 I 0.782
OPUNC03G15240 Oryza punctata OPUNC03G15240 I 0.821
OPUNC07G25150 Oryza punctata OPUNC07G25150 I 0.773
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 0.866
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.878
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.737
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.878
ORGLA03G0150600 Oryza glaberrima ORGLA03G0150600 I 0.821
ORGLA07G0211700 Oryza glaberrima ORGLA07G0211700 I 0.782
ORUFI03G16290 Oryza rufipogon ORUFI03G16290 I 0.821
ORUFI07G27710 Oryza rufipogon ORUFI07G27710 I 0.782
OS03G0324200 Oryza sativa OS03G0324200 I 0.821
OS03G0324300 Oryza sativa OS03G0324300 I 0.821
OS07G0685700 Oryza sativa OS07G0685700 I 0.782
Pavir.Bb03705 Panicum virgatum Pavir.Bb03705 I 0.746
Pavir.Ia03450 Panicum virgatum Pavir.Ia03450 I 0.821
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.827
Pavir.J01001 Panicum virgatum Pavir.J01001 I 0.746
PDK_20s1443543g001 Phoenix dactylifera PDK_20s1443543g001 I 0.738
PGSC0003DMG400005914 Solanum tuberosum PGSC0003DMG400005914 I 0.833
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.846
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.858
PGSC0003DMG400021381 Solanum tuberosum PGSC0003DMG400021381 I 0.709
PGSC0003DMG400027507 Solanum tuberosum PGSC0003DMG400027507 I 0.854
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.737
PK01239.1 Cannabis sativa PK01239.1 I 0.886
PK13351.1 Cannabis sativa PK13351.1 I 0.886
PK19114.1 Cannabis sativa PK19114.1 I 0.725
Pm017009 Prunus mume Pm017009 I 0.886
Pm028171 Prunus mume Pm028171 I 0.735
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.737
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.718
POPTR_0004s20830 Populus trichocarpa POPTR_0004s20830 I 0.862
POPTR_0008s01200 Populus trichocarpa POPTR_0008s01200 I 0.886
POPTR_0009s16080 Populus trichocarpa POPTR_0009s16080 I 0.858
POPTR_0010s25370 Populus trichocarpa POPTR_0010s25370 I 0.878
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.734
PRUPE_ppa003493mg Prunus persica PRUPE_ppa003493mg I 0.835
PRUPE_ppa003550mg Prunus persica PRUPE_ppa003550mg I 0.870
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.854
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.721
SapurV1A.0036s0870 Salix purpurea SapurV1A.0036s0870 I 0.874
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I 0.863
SapurV1A.0561s0140 Salix purpurea SapurV1A.0561s0140 I 0.843
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.874
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.725
Sb01g036740 Sorghum bicolor Sb01g036740 I 0.821
Sb02g043350 Sorghum bicolor Sb02g043350 I 0.745
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I 0.822
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I 0.822
SELMODRAFT_16064 Selaginella moellendorffii SELMODRAFT_16064 I 0.718
SELMODRAFT_16065 Selaginella moellendorffii SELMODRAFT_16065 I 0.718
SELMODRAFT_419770 Selaginella moellendorffii SELMODRAFT_419770 I 0.841
SELMODRAFT_449238 Selaginella moellendorffii SELMODRAFT_449238 I 0.809
Si029213m.g Setaria italica Si029213m.g I 0.749
Si034616m.g Setaria italica Si034616m.g I 0.813
Solyc01g006650.1 Solanum lycopersicum Solyc01g006650.1 I 0.704
Solyc01g009170.2 Solanum lycopersicum Solyc01g009170.2 I 0.858
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.734
Solyc01g096810.2 Solanum lycopersicum Solyc01g096810.2 I 0.850
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.850
Solyc06g073730.1 Solanum lycopersicum Solyc06g073730.1 I 0.835
TCM_040510 Theobroma cacao TCM_040510 I 0.742
TCM_042022 Theobroma cacao TCM_042022 I 0.882
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.847
Thhalv10018327m.g Eutrema salsugineum Thhalv10018327m.g I 0.732
Thhalv10020292m.g Eutrema salsugineum Thhalv10020292m.g I 0.858
Traes_2BS_647C82888 Triticum aestivum Traes_2BS_647C82888 I 0.721
Traes_4AS_2BDA1260C Triticum aestivum Traes_4AS_2BDA1260C I 0.817
Traes_4BL_F34EBD618 Triticum aestivum Traes_4BL_F34EBD618 I 0.887
Traes_4DL_C083C804E Triticum aestivum Traes_4DL_C083C804E I 0.827
Traes_5DL_62DEF8361 Triticum aestivum Traes_5DL_62DEF8361 I 0.744
TRIUR3_26675 Triticum urartu TRIUR3_26675 N 0.711
TRIUR3_30860 Triticum urartu TRIUR3_30860 I 0.737
VIT_06s0009g01380 Vitis vinifera VIT_06s0009g01380 I 0.858
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.911