IRF8 (Ochotona princeps)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSOPRG00000002139 T244283_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF8
M03335_2.00 		Homo sapiens
HCGAAACYGAAACY
RGTTTCRGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_1 		0.971 0.971
IRF8
M03336_2.00 		Homo sapiens
HCGAAACCGAAACT
AGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_2 		0.971 0.971
IRF8
M05541_2.00 		Homo sapiens
NYGAAASYGAAASHN
NDSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX 		0.971 0.971
IRF8
M05543_2.00 		Homo sapiens
NCGAAACYGAAACYN
NRGTTTCRGTTTCGN		 SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX 		0.971 0.971
IRF8
M09236_2.00 		Homo sapiens
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B 		0.971 0.971
Irf8
M09246_2.00 		Mus musculus
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A 		0.971 0.971
IRF8
M10890_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ICSBP_Q6 		0.971 0.971
IRF8
M10891_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF8_Q6 		0.971 0.971
IRF8
M05542_2.00 		Homo sapiens
NYGAAASYGAAASYN
NRSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX 		0.971 0.971
IRF8
M05544_2.00 		Homo sapiens
NYGAAASYGAAACYD
HRGTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX 		0.971 0.971
Irf4
M00175_2.00 		Mus musculus
NNNYGAWASN
NSTWTCRNNN		 PBM
Badis et al.(2009)
Irf4_3476 		0.798 0.798
IRF4
M03334_2.00 		Homo sapiens
HCGAAACCGAAACYW
WRGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF4_1 		0.798 0.798
IRF4
M05539_2.00 		Homo sapiens
NYGAAACYGAAACYN
NRGTTTCRGTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX 		0.798 0.798
IRF4
M07978_2.00 		Homo sapiens
DNDVNNGWWVTGAVWVWN
NWBWBTCABWWCNNBHNH		 ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha 		0.798 0.798
IRF4
M09235_2.00 		Homo sapiens
NDWDRRGGAASTGARAVH
DBTYTCASTTCCYYHWHN		 Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A 		0.798 0.798
Irf4
M09243_2.00 		Mus musculus
NDAWVVRGAASTGARAVH
DBTYTCASTTCYBBWTHN		 Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A 		0.798 0.798
IRF4
M09595_2.00 		Homo sapiens
HNYGAAASYD
HRSTTTCRND		 Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465 		0.798 0.798
IRF4
M10885_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_07 		0.798 0.798
IRF4
M10886_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_08 		0.798 0.798
IRF4
M10887_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5_01 		0.798 0.798
IRF4
M10888_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5 		0.798 0.798
IRF4
M10889_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q6 		0.798 0.798
IRF4
M05540_2.00 		Homo sapiens
NYGAAASYGAWASHN
NDSTWTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX 		0.798 0.798
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000001967 IRF 9 113

Links

Other IRF family TFs
Other Ochotona princeps TFs

158 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29794.m003447 Ricinus communis 29794.m003447 I
29846.m000184 Ricinus communis 29846.m000184 I
AMTR_s00012p00208260 Amborella trichopoda AMTR_s00012p00208260 I
AMTR_s00109p00061950 Amborella trichopoda AMTR_s00109p00061950 I
Aquca_003_00045 Aquilegia coerulea Aquca_003_00045 I
ATMYB3R5 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6000124 I
BGIOSGA017917 Oryza indica BGIOSGA017917 I
Bo1g010040 Brassica oleracea Bo1g010040 I
Bo1g144510 Brassica oleracea Bo1g144510 I
Bo3g007070 Brassica oleracea Bo3g007070 I
Bo3g171130 Brassica oleracea Bo3g171130 I
Bo3g179620 Brassica oleracea Bo3g179620 I
Bo5g139340 Brassica oleracea Bo5g139340 I
Bo7g115810 Brassica oleracea Bo7g115810 I
Bo9g184660 Brassica oleracea Bo9g184660 I
Bostr.20055s0087 Boechera stricta Bostr.20055s0087 I
Bostr.22252s0130 Boechera stricta Bostr.22252s0130 I
Bostr.6251s0040 Boechera stricta Bostr.6251s0040 I
Bostr.7867s1124 Boechera stricta Bostr.7867s1124 I
Bra006102 Brassica rapa Bra006102 I
Bra008956 Brassica rapa Bra008956 I
Bra009597 Brassica rapa Bra009597 I
Bra011376 Brassica rapa Bra011376 I
Bra029762 Brassica rapa Bra029762 I
Bra034067 Brassica rapa Bra034067 I
Bra034531 Brassica rapa Bra034531 I
BRADI2G54640 Brachypodium distachyon BRADI2G54640 I
Cagra.0487s0012 Capsella grandiflora Cagra.0487s0012 I
Cagra.2515s0028 Capsella grandiflora Cagra.2515s0028 I
Cagra.7526s0003 Capsella grandiflora Cagra.7526s0003 I
Carubv10000155m.g Capsella rubella Carubv10000155m.g I
Carubv10000643m.g Capsella rubella Carubv10000643m.g I
Carubv10013377m.g Capsella rubella Carubv10013377m.g I
cassava12645.valid.m1 Manihot esculenta cassava12645.valid.m1 I
Ca_14925 Cicer arietinum Ca_14925 I
chr1.CM0147.520.nd Lotus japonicus chr1.CM0147.520.nd I
Ciclev10007316m.g Citrus clementina Ciclev10007316m.g I
Ciclev10011452m.g Citrus clementina Ciclev10011452m.g I
Cla018173 Citrullus lanatus Cla018173 I
Cla022565 Citrullus lanatus Cla022565 I
Cla023357 Citrullus lanatus Cla023357 I
Cucsa.161430 Cucumis sativus Cucsa.161430 I
Cucsa.175460 Cucumis sativus Cucsa.175460 I
Cucsa.311420 Cucumis sativus Cucsa.311420 I
Eucgr.C02893 Eucalyptus grandis Eucgr.C02893 I
Eucgr.K03133 Eucalyptus grandis Eucgr.K03133 I
evm.TU.supercontig_228.17 Carica papaya evm.TU.supercontig_228.17 I
evm.TU.supercontig_78.76 Carica papaya evm.TU.supercontig_78.76 I
e_gw1.120.1.1 Physcomitrella patens e_gw1.120.1.1 I
e_gw1.36.4.1 Physcomitrella patens e_gw1.36.4.1 I
F775_05724 Aegilops tauschii F775_05724 I
fgenesh1_pg.C_scaffold_3000839 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000839 I
gene08793-v1.0-hybrid Fragaria vesca gene08793-v1.0-hybrid I
gene18416-v1.0-hybrid Fragaria vesca gene18416-v1.0-hybrid I
GLYMA04G08550 Glycine max GLYMA04G08550 I
GLYMA06G08660 Glycine max GLYMA06G08660 I
GLYMA07G15820 Glycine max GLYMA07G15820 I
GLYMA18G39740 Glycine max GLYMA18G39740 I
Gorai.001G249400 Gossypium raimondii Gorai.001G249400 I
Gorai.006G172800 Gossypium raimondii Gorai.006G172800 I
Gorai.008G117400 Gossypium raimondii Gorai.008G117400 N
Gorai.009G051000 Gossypium raimondii Gorai.009G051000 I
GRMZM2G081919 Zea mays GRMZM2G081919 I
GSMUA_Achr10G26610_001 Musa acuminata GSMUA_Achr10G26610_001 I
GSMUA_Achr6G05030_001 Musa acuminata GSMUA_Achr6G05030_001 I
GSMUA_Achr7G10520_001 Musa acuminata GSMUA_Achr7G10520_001 I
LjT22I05.60.nd Lotus japonicus LjT22I05.60.nd I
LPERR01G31650 Leersia perrieri LPERR01G31650 I
LPERR05G15070 Leersia perrieri LPERR05G15070 N
Lus10022136.g Linum usitatissimum Lus10022136.g I
Lus10024394.g Linum usitatissimum Lus10024394.g I
Lus10025351.g Linum usitatissimum Lus10025351.g I
MDP0000179225 Malus domestica MDP0000179225 I
MDP0000219581 Malus domestica MDP0000219581 I
MDP0000295807 Malus domestica MDP0000295807 I
mgf008601m Mimulus guttatus mgf008601m I
mgf019610m Mimulus guttatus mgf019610m I
MTR_1g026870 Medicago truncatula MTR_1g026870 I
MTR_3g110028 Medicago truncatula MTR_3g110028 I
MTR_7g061330 Medicago truncatula MTR_7g061330 I
MTR_7g461410 Medicago truncatula MTR_7g461410 I
MYB3R-2 Oryza sativa OS01G0841500 I
MYB3R-3 Arabidopsis thaliana AT3G09370 I
MYB3R-4 Arabidopsis lyrata fgenesh2_kg.6__1121__AT5G11510.1 I
MYB3R5 Arabidopsis thaliana AT5G02320 D
OB01G18340 Oryza brachyantha OB01G18340 I
OB01G45570 Oryza brachyantha OB01G45570 I
OB05G26770 Oryza brachyantha OB05G26770 N
OB12G16480 Oryza brachyantha OB12G16480 I
OBART01G08110 Oryza barthii OBART01G08110 I
OBART05G19200 Oryza barthii OBART05G19200 I
OGLUM01G09290 Oryza glumaepatula OGLUM01G09290 I
OGLUM01G40780 Oryza glumaepatula OGLUM01G40780 I
OGLUM05G20280 Oryza glumaepatula OGLUM05G20280 N
OLONG_011208 Oryza longistaminata OLONG_011208 I
OLONG_011886 Oryza longistaminata OLONG_011886 I
OMERI01G08160 Oryza meridionalis OMERI01G08160 I
ONIVA01G10670 Oryza nivara ONIVA01G10670 I
ONIVA05G20060 Oryza nivara ONIVA05G20060 I
OPUNC01G07980 Oryza punctata OPUNC01G07980 I
OPUNC01G08000 Oryza punctata OPUNC01G08000 I
OPUNC05G16800 Oryza punctata OPUNC05G16800 I
orange1.1g009402m.g Citrus sinensis orange1.1g009402m.g I
ORGLA01G0073200 Oryza glaberrima ORGLA01G0073200 I
ORGLA01G0306500 Oryza glaberrima ORGLA01G0306500 I
ORGLA05G0166300 Oryza glaberrima ORGLA05G0166300 I
ORGLA12G0066300 Oryza glaberrima ORGLA12G0066300 I
ORUFI05G20390 Oryza rufipogon ORUFI05G20390 I
OS05G0459000 Oryza sativa OS05G0459000 I
OS12G0238000 Oryza sativa OS12G0238000 I
Pavir.Ea00087 Panicum virgatum Pavir.Ea00087 I
Pavir.Ea03349 Panicum virgatum Pavir.Ea03349 I
Pavir.Eb00149 Panicum virgatum Pavir.Eb00149 I
Pavir.Eb03676 Panicum virgatum Pavir.Eb03676 I
PC-MYB1 Arabidopsis thaliana AT4G32730 D
PC-MYB1 Arabidopsis lyrata fgenesh2_kg.7__866__AT4G32730.2 I
PGSC0003DMG400008908 Solanum tuberosum PGSC0003DMG400008908 I
PK12011.1 Cannabis sativa PK12011.1 D
Pm002704 Prunus mume Pm002704 I
Pm005124 Prunus mume Pm005124 I
POPTR_0006s08570 Populus trichocarpa POPTR_0006s08570 I
POPTR_0006s25840 Populus trichocarpa POPTR_0006s25840 I
POPTR_0018s00710 Populus trichocarpa POPTR_0018s00710 I
PRUPE_ppa000676mg Prunus persica PRUPE_ppa000676mg I
PRUPE_ppa003208mg Prunus persica PRUPE_ppa003208mg I
Q948S5_TOBAC Nicotiana tabacum Q948S5_TOBAC D
SapurV1A.0001s1810 Salix purpurea SapurV1A.0001s1810 I
SapurV1A.0283s0180 Salix purpurea SapurV1A.0283s0180 I
Sb03g039470 Sorghum bicolor Sb03g039470 I
Si000842m.g Setaria italica Si000842m.g I
Si021484m.g Setaria italica Si021484m.g I
Solyc08g068320.2 Solanum lycopersicum Solyc08g068320.2 I
Solyc09g010820.2 Solanum lycopersicum Solyc09g010820.2 I
TCM_021936 Theobroma cacao TCM_021936 I
TCM_047091 Theobroma cacao TCM_047091 I
Thhalv10012583m.g Eutrema salsugineum Thhalv10012583m.g I
Thhalv10013211m.g Eutrema salsugineum Thhalv10013211m.g I
Thhalv10020579m.g Eutrema salsugineum Thhalv10020579m.g I
TRAES3BF049800070CFD_g Triticum aestivum TRAES3BF049800070CFD_g I
TRAES3BF104600030CFD_g Triticum aestivum TRAES3BF104600030CFD_g I
Traes_1AL_51EBF8930 Triticum aestivum Traes_1AL_51EBF8930 N
Traes_1AS_61D017632 Triticum aestivum Traes_1AS_61D017632 I
Traes_1BL_C25B5DDB4 Triticum aestivum Traes_1BL_C25B5DDB4 I
Traes_1BS_403DBC53C Triticum aestivum Traes_1BS_403DBC53C I
Traes_1DL_B26A733D4 Triticum aestivum Traes_1DL_B26A733D4 I
Traes_3AL_386795528 Triticum aestivum Traes_3AL_386795528 I
Traes_3AS_09025DA2E Triticum aestivum Traes_3AS_09025DA2E I
Traes_3DL_6BBC889A1 Triticum aestivum Traes_3DL_6BBC889A1 I
TRIUR3_24658 Triticum urartu TRIUR3_24658 I
TRIUR3_29290 Triticum urartu TRIUR3_29290 I
VIT_08s0007g00360 Vitis vinifera VIT_08s0007g00360 I
VIT_11s0016g03750 Vitis vinifera VIT_11s0016g03750 I