scaffold488-EXSNAP2012.17 (Pristionchus exspectatus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 scaffold488-EXSNAP2012.17 T310267_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-34
M00690_2.00 		Caenorhabditis elegans
NNNNDHYRNN
NNYRDHNNNN		 PBM
Narasimhan et al.(2015)
pTH9907 		0.840 0.571
nhr-154
M00698_2.00 		Caenorhabditis elegans
NRBRYCAHWD
HWDTGRYVYN		 PBM
Narasimhan et al.(2015)
pTH10650 		0.746 0.486
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold488-EXSNAP2012.17 Nuclear receptor 105 174

Links

Other Nuclear receptor family TFs
Other Pristionchus exspectatus TFs

164 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000956101 Angiostrongylus cantonensis ACAC_0000956101 I 0.866
ACOC_0000749401 Angiostrongylus costaricensis ACOC_0000749401 I 0.866
ANCCAN_20599 Ancylostoma caninum ANCCAN_20599 I 0.766
ANCCAN_22066 Ancylostoma caninum ANCCAN_22066 I 0.825
ANCCEY_12461 Ancylostoma ceylanicum ANCCEY_12461 I 0.825
ANCDUO_15746 Ancylostoma duodenale ANCDUO_15746 I 0.825
ASIM_0001548701 Anisakis simplex ASIM_0001548701 I 0.830
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.793
ASU_00971 Ascaris suum ASU_00971 I 0.831
ASU_03657 Ascaris suum ASU_03657 I 0.793
Bm5457 Brugia malayi Bm5457 I 0.830
BTMF_0000941401 Brugia timori BTMF_0000941401 I 0.766
BTMF_0001565301 Brugia timori BTMF_0001565301 I 0.830
BXY_0053200 Bursaphelenchus xylophilus BXY_0053200 I 0.841
BXY_0861500 Bursaphelenchus xylophilus BXY_0861500 I 0.805
BXY_1082600 Bursaphelenchus xylophilus BXY_1082600 I 0.955
BXY_1375200 Bursaphelenchus xylophilus BXY_1375200 I 0.849
CBG03466 Caenorhabditis briggsae CBG03466 I 0.866
CBG03860 Caenorhabditis briggsae CBG03860 I 0.877
CBG04240 Caenorhabditis briggsae CBG04240 I 0.924
CBG13142 Caenorhabditis briggsae CBG13142 I 0.974
CBG14996 Caenorhabditis briggsae CBG14996 I 0.810
CBG22587 Caenorhabditis briggsae CBG22587 I 0.837
CBG22776 Caenorhabditis briggsae CBG22776 I 0.830
CBN04415 Caenorhabditis brenneri CBN04415 I 0.974
CBN05776 Caenorhabditis brenneri CBN05776 I 0.877
CBN08474 Caenorhabditis brenneri CBN08474 I 0.830
CBN28641 Caenorhabditis brenneri CBN28641 I 0.866
CBN32300 Caenorhabditis brenneri CBN32300 I 0.974
CGOC_0000279901 Cylicostephanus goldi CGOC_0000279901 I 0.766
CJA02727 Caenorhabditis japonica CJA02727 I 0.976
CJA06107 Caenorhabditis japonica CJA06107 I 0.950
CJA14035 Caenorhabditis japonica CJA14035 I 0.830
CJA14248 Caenorhabditis japonica CJA14248 I 0.822
CJA14611 Caenorhabditis japonica CJA14611 I 0.866
CJA18307 Caenorhabditis japonica CJA18307 I 0.850
CJA19445 Caenorhabditis japonica CJA19445 I 0.877
CRE07033 Caenorhabditis remanei CRE07033 I 0.837
CRE07034 Caenorhabditis remanei CRE07034 I 0.842
CRE08264 Caenorhabditis remanei CRE08264 I 0.877
CRE09416 Caenorhabditis remanei CRE09416 I 0.765
CRE10779 Caenorhabditis remanei CRE10779 I 0.837
CRE21925 Caenorhabditis remanei CRE21925 I 0.830
CRE22212 Caenorhabditis remanei CRE22212 I 0.801
CRE24933 Caenorhabditis remanei CRE24933 I 0.943
CRE26423 Caenorhabditis remanei CRE26423 I 0.974
CRE29874 Caenorhabditis remanei CRE29874 I 0.866
DICVIV_01644 Dictyocaulus viviparus DICVIV_01644 I 0.866
DICVIV_11073 Dictyocaulus viviparus DICVIV_11073 I 0.849
EEL_0000265301 Elaeophora elaphi EEL_0000265301 I 0.830
EEL_0000989101 Elaeophora elaphi EEL_0000989101 I 0.749
EVEC_0000864401 Enterobius vermicularis EVEC_0000864401 I 0.831
genemark-nMf.1.1.scaf00584-processed-gene-0.4 Meloidogyne floridensis genemark-nMf.1.1.scaf00584-processed-gene-0.4 I 0.839
genemark-nMf.1.1.scaf02603-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf02603-processed-gene-0.3 I 0.896
GPLIN_000284100 Globodera pallida GPLIN_000284100 I 0.752
GPLIN_000327200 Globodera pallida GPLIN_000327200 I 0.817
Hba_12763 Heterorhabditis bacteriophora Hba_12763 I 0.786
Hba_17038 Heterorhabditis bacteriophora Hba_17038 I 0.876
Hba_17946 Heterorhabditis bacteriophora Hba_17946 I 0.798
HCOI00094500 Haemonchus contortus HCOI00094500 I 0.866
HCOI01442000 Haemonchus contortus HCOI01442000 I 0.866
HCOI01927800 Haemonchus contortus HCOI01927800 I 0.825
HCOI01945300 Haemonchus contortus HCOI01945300 I 0.879
HCOI02126500 Haemonchus contortus HCOI02126500 I 0.879
HPBE_0001033901 Heligmosomoides bakeri HPBE_0001033901 I 0.766
HPBE_0001438801 Heligmosomoides bakeri HPBE_0001438801 I 0.875
HPBE_0001524301 Heligmosomoides bakeri HPBE_0001524301 I 0.866
HPLM_0000308401 Haemonchus placei HPLM_0000308401 I 0.766
HPLM_0001358001 Haemonchus placei HPLM_0001358001 I 0.879
L596_g10816 Steinernema carpocapsae L596_g10816 I 0.835
L596_g25910 Steinernema carpocapsae L596_g25910 I 0.826
L596_g26401 Steinernema carpocapsae L596_g26401 I 0.856
L596_g7829 Steinernema carpocapsae L596_g7829 I 0.947
L596_g9277 Steinernema carpocapsae L596_g9277 I 0.830
L596_g9904 Steinernema carpocapsae L596_g9904 I 0.888
L889_g11570 Steinernema feltiae L889_g11570 I 0.752
L889_g15424 Steinernema feltiae L889_g15424 I 0.942
L889_g16305 Steinernema feltiae L889_g16305 I 0.857
L889_g25097 Steinernema feltiae L889_g25097 I 0.830
L889_g2977 Steinernema feltiae L889_g2977 I 0.833
L889_g31970 Steinernema feltiae L889_g31970 I 0.826
L889_g366 Steinernema feltiae L889_g366 I 0.869
L892_g17146 Steinernema scapterisci L892_g17146 I 0.856
L892_g17832 Steinernema scapterisci L892_g17832 I 0.888
L892_g186 Steinernema scapterisci L892_g186 I 0.830
L892_g23093 Steinernema scapterisci L892_g23093 I 0.835
L892_g3438 Steinernema scapterisci L892_g3438 I 0.948
L892_g4134 Steinernema scapterisci L892_g4134 I 0.750
L893_g15045 Steinernema glaseri L893_g15045 I 0.773
L893_g21283 Steinernema glaseri L893_g21283 I 0.752
L893_g263 Steinernema glaseri L893_g263 I 0.826
L893_g33656 Steinernema glaseri L893_g33656 I 0.942
L893_g5404 Steinernema glaseri L893_g5404 I 0.869
L893_g6023 Steinernema glaseri L893_g6023 I 0.780
L893_g6565 Steinernema glaseri L893_g6565 I 0.857
L898_g11608 Steinernema monticolum L898_g11608 I 0.826
L898_g18440 Steinernema monticolum L898_g18440 I 0.830
L898_g23058 Steinernema monticolum L898_g23058 I 0.752
L898_g32368 Steinernema monticolum L898_g32368 I 0.832
L898_g5338 Steinernema monticolum L898_g5338 I 0.857
L898_g9613 Steinernema monticolum L898_g9613 I 0.942
LOAG_07549 Loa loa LOAG_07549 I 0.830
LOAG_16377 Loa loa LOAG_16377 I 0.766
MhA1_Contig691.frz3.gene13 Meloidogyne hapla MhA1_Contig691.frz3.gene13 I 0.891
MhA1_Contig817.frz3.gene1 Meloidogyne hapla MhA1_Contig817.frz3.gene1 I 0.771
Minc11307 Meloidogyne incognita Minc11307 I 0.894
Minc13747 Meloidogyne incognita Minc13747 I 0.771
Minc17538 Meloidogyne incognita Minc17538 I 0.771
nAv.1.0.1.g08447 Acanthocheilonema viteae nAv.1.0.1.g08447 I 0.830
NBR_0000015501 Nippostrongylus brasiliensis NBR_0000015501 I 0.825
nDi.2.2.2.g03974 Dirofilaria immitis nDi.2.2.2.g03974 I 0.830
NECAME_02375 Necator americanus NECAME_02375 I 0.825
nhr-118 Caenorhabditis elegans WBGene00003708 I 0.792
nhr-138 Caenorhabditis elegans WBGene00003728 I 0.797
nhr-14 Caenorhabditis elegans WBGene00003613 I 0.830
nhr-154 Caenorhabditis elegans WBGene00007547 D 0.746
nhr-21 Caenorhabditis elegans WBGene00003620 I 0.967
nhr-34 Caenorhabditis elegans WBGene00003627 D 0.840
nhr-4 Caenorhabditis elegans WBGene00003603 I 0.866
nhr-61 Caenorhabditis elegans WBGene00003651 I 0.950
nhr-62 Caenorhabditis elegans WBGene00003652 I 0.877
nLs.2.1.2.g04526 Litomosoides sigmodontis nLs.2.1.2.g04526 I 0.830
nOo.2.0.1.g02628 Onchocerca ochengi nOo.2.0.1.g02628 I 0.830
OESDEN_00859 Oesophagostomum dentatum OESDEN_00859 I 0.766
OFLC_0000076301 Onchocerca flexuosa OFLC_0000076301 I 0.830
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.793
Ppa-nhr-14 Pristionchus pacificus PPA06980 I 0.830
Ppa-nhr-61 Pristionchus pacificus PPA27722 I 0.870
PPA06637 Pristionchus pacificus PPA06637 I 0.760
PPA14696 Pristionchus pacificus PPA14696 I 0.752
PPA24481 Pristionchus pacificus PPA24481 I 0.772
PPA29597 Pristionchus pacificus PPA29597 I 0.761
PTRK_0000748600 Parastrongyloides trichosuri PTRK_0000748600 I 0.795
PTRK_0001236400 Parastrongyloides trichosuri PTRK_0001236400 I 0.806
PTRK_0001591500 Parastrongyloides trichosuri PTRK_0001591500 I 0.831
RSKR_0000178700 Rhabditophanes kr3021 RSKR_0000178700 I 0.764
RSKR_0001175400 Rhabditophanes kr3021 RSKR_0001175400 I 0.825
scaffold1338-EXSNAP2012.3 Pristionchus exspectatus scaffold1338-EXSNAP2012.3 I 0.830
scaffold251-EXSNAP2012.44 Pristionchus exspectatus scaffold251-EXSNAP2012.44 I 0.751
scaffold277-EXSNAP2012.12 Pristionchus exspectatus scaffold277-EXSNAP2012.12 I 0.857
scaffold426-EXSNAP2012.35 Pristionchus exspectatus scaffold426-EXSNAP2012.35 I 0.779
scaffold488-EXSNAP2012.15 Pristionchus exspectatus scaffold488-EXSNAP2012.15 N 0.875
scaffold52-EXSNAP2012.30 Pristionchus exspectatus scaffold52-EXSNAP2012.30 I 0.836
scaffold552-EXSNAP2012.17 Pristionchus exspectatus scaffold552-EXSNAP2012.17 I 0.772
scaffold552-EXSNAP2012.18 Pristionchus exspectatus scaffold552-EXSNAP2012.18 I 0.761
scaffold598-EXSNAP2012.5 Pristionchus exspectatus scaffold598-EXSNAP2012.5 I 0.758
scaffold826-EXSNAP2012.10 Pristionchus exspectatus scaffold826-EXSNAP2012.10 I 0.751
SMUV_0000230901 Syphacia muris SMUV_0000230901 I 0.893
SMUV_0000835401 Syphacia muris SMUV_0000835401 I 0.815
SPAL_0000533900 Strongyloides papillosus SPAL_0000533900 I 0.811
SPAL_0001056000 Strongyloides papillosus SPAL_0001056000 I 0.831
SPAL_0001238400 Strongyloides papillosus SPAL_0001238400 I 0.794
SSTP_0000230100 Strongyloides stercoralis SSTP_0000230100 I 0.831
SSTP_0000860300 Strongyloides stercoralis SSTP_0000860300 I 0.811
SVE_0105800 Strongyloides venezuelensis SVE_0105800 I 0.811
SVE_0697700 Strongyloides venezuelensis SVE_0697700 I 0.794
SVE_1768400 Strongyloides venezuelensis SVE_1768400 I 0.831
SVUK_0000195901 Strongylus vulgaris SVUK_0000195901 I 0.825
TCLT_0000342401 Thelazia callipaeda TCLT_0000342401 I 0.830
TCLT_0000612301 Thelazia callipaeda TCLT_0000612301 I 0.748
TCNE_0000582701 Toxocara canis TCNE_0000582701 I 0.830
TELCIR_07460 Teladorsagia circumcincta TELCIR_07460 I 0.825
WBGene00239376 Onchocerca volvulus WBGene00239376 I 0.830
WBGene00240403 Onchocerca volvulus WBGene00240403 I 0.746