CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSONIG00000009273
(
Oreochromis niloticus
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSONIG00000009273
T168183_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
1.000
1.000
A6H8I1_DANRE
M01906_2.00
Danio rerio
CGTACGYA
TRCGTACG
PBM
Weirauch et al.(2014)
pTH9257
0.957
0.957
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.894
0.894
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN
NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
0.894
0.894
KDM2A
M01915_2.00
Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH9212
0.809
0.809
kdm2aa
M01910_2.00
Danio rerio
NCGNNNNNN
NNNNNNCGN
PBM
Weirauch et al.(2014)
pTH8585
0.723
0.723
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSONIP00000011663
CxxC
14
60
GARRRRTRCRRCQACMRTECGECHFCKDMKKFGGPGRMKQSCLLRQC
Links
Other
CxxC
family TFs
Other
Oreochromis niloticus
TFs
242 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00088p00161000
Amborella trichopoda
AMTR_s00088p00161000
N
0.000
Aquca_028_00248
Aquilegia coerulea
Aquca_028_00248
N
0.000
Aquca_005_00234
Aquilegia coerulea
Aquca_005_00234
N
0.000
PAT1
Arabidopsis lyrata
scaffold_801100.1
N
0.000
SCL21
Arabidopsis lyrata
scaffold_303269.1
N
0.000
SCL5
Arabidopsis lyrata
fgenesh2_kg.1__4145__AT1G50600.1
N
0.000
SCL5
Arabidopsis thaliana
AT1G50600
N
0.000
PAT1
Arabidopsis thaliana
AT5G48150
N
0.000
SCL21
Arabidopsis thaliana
AT2G04890
N
0.000
Bostr.5224s0004
Boechera stricta
Bostr.5224s0004
N
0.000
Bostr.26675s0117
Boechera stricta
Bostr.26675s0117
N
0.000
Bostr.19424s0023
Boechera stricta
Bostr.19424s0023
N
0.000
Bo9g009240
Brassica oleracea
Bo9g009240
N
0.000
Bo7g089080
Brassica oleracea
Bo7g089080
N
0.000
Bo6g022330
Brassica oleracea
Bo6g022330
N
0.000
Bo2g149670
Brassica oleracea
Bo2g149670
N
0.000
Bo7g030310
Brassica oleracea
Bo7g030310
N
0.000
Bo9g009260
Brassica oleracea
Bo9g009260
N
0.000
Bra037509
Brassica rapa
Bra037509
N
0.000
Bra036185
Brassica rapa
Bra036185
N
0.000
Bra026077
Brassica rapa
Bra026077
N
0.000
Bra020715
Brassica rapa
Bra020715
N
0.000
Bra018860
Brassica rapa
Bra018860
N
0.000
PK09018.1
Cannabis sativa
PK09018.1
N
0.000
PK15082.1
Cannabis sativa
PK15082.1
N
0.000
Cagra.1158s0007
Capsella grandiflora
Cagra.1158s0007
N
0.000
Cagra.2766s0005
Capsella grandiflora
Cagra.2766s0005
N
0.000
Cagra.7055s0004
Capsella grandiflora
Cagra.7055s0004
N
0.000
Carubv10026289m.g
Capsella rubella
Carubv10026289m.g
N
0.000
Carubv10015685m.g
Capsella rubella
Carubv10015685m.g
N
0.000
Carubv10008830m.g
Capsella rubella
Carubv10008830m.g
N
0.000
evm.TU.supercontig_12.194
Carica papaya
evm.TU.supercontig_12.194
N
0.000
evm.TU.supercontig_136.17
Carica papaya
evm.TU.supercontig_136.17
N
0.000
Ca_09786
Cicer arietinum
Ca_09786
N
0.000
Ca_13855
Cicer arietinum
Ca_13855
N
0.000
Cla004565
Citrullus lanatus
Cla004565
N
0.000
Cla001429
Citrullus lanatus
Cla001429
N
0.000
Ciclev10014845m.g
Citrus clementina
Ciclev10014845m.g
N
0.000
Ciclev10007927m.g
Citrus clementina
Ciclev10007927m.g
N
0.000
orange1.1g009376m.g
Citrus sinensis
orange1.1g009376m.g
N
0.000
Cucsa.120390
Cucumis sativus
Cucsa.120390
N
0.000
Eucgr.F03523
Eucalyptus grandis
Eucgr.F03523
N
0.000
Thhalv10011379m.g
Eutrema salsugineum
Thhalv10011379m.g
N
0.000
Thhalv10002541m.g
Eutrema salsugineum
Thhalv10002541m.g
N
0.000
Thhalv10004053m.g
Eutrema salsugineum
Thhalv10004053m.g
N
0.000
gene03551-v1.0-hybrid
Fragaria vesca
gene03551-v1.0-hybrid
N
0.000
gene21592-v1.0-hybrid
Fragaria vesca
gene21592-v1.0-hybrid
N
0.000
GLYMA14G01960
Glycine max
GLYMA14G01960
N
0.000
GLYMA14G01020
Glycine max
GLYMA14G01020
N
0.000
GLYMA09G22110
Glycine max
GLYMA09G22110
N
0.000
GLYMA02G47640
Glycine max
GLYMA02G47640
N
0.000
GLYMA02G46730
Glycine max
GLYMA02G46730
N
0.000
Gorai.001G192800
Gossypium raimondii
Gorai.001G192800
N
0.000
Gorai.002G096300
Gossypium raimondii
Gorai.002G096300
N
0.000
Gorai.007G167000
Gossypium raimondii
Gorai.007G167000
N
0.000
Gorai.009G446100
Gossypium raimondii
Gorai.009G446100
N
0.000
Lus10003772.g
Linum usitatissimum
Lus10003772.g
N
0.000
Lus10006369.g
Linum usitatissimum
Lus10006369.g
N
0.000
Lus10012323.g
Linum usitatissimum
Lus10012323.g
N
0.000
Lus10016596.g
Linum usitatissimum
Lus10016596.g
N
0.000
LjSGA_018703.2
Lotus japonicus
LjSGA_018703.2
N
0.000
chr6.LjT11E14.20.nc
Lotus japonicus
chr6.LjT11E14.20.nc
N
0.000
MDP0000804652
Malus domestica
MDP0000804652
N
0.000
MDP0000152670
Malus domestica
MDP0000152670
N
0.000
MDP0000205236
Malus domestica
MDP0000205236
N
0.000
MDP0000284679
Malus domestica
MDP0000284679
N
0.000
cassava34699.m1
Manihot esculenta
cassava34699.m1
N
0.000
cassava10826.m1
Manihot esculenta
cassava10826.m1
N
0.000
cassava34106.m1
Manihot esculenta
cassava34106.m1
N
0.000
cassava8885.m1
Manihot esculenta
cassava8885.m1
N
0.000
MTR_5g097480
Medicago truncatula
MTR_5g097480
N
0.000
MTR_5g094450
Medicago truncatula
MTR_5g094450
N
0.000
MTR_3g056110
Medicago truncatula
MTR_3g056110
N
0.000
OMERI10G05450
Oryza meridionalis
OMERI10G05450
N
0.000
CIGR2
Oryza sativa
OS07G0583600
N
0.000
PDK_20s1411471g003
Phoenix dactylifera
PDK_20s1411471g003
N
0.000
SCL5
Populus trichocarpa
POPTR_0001s37270
N
0.000
POPTR_0014s16230
Populus trichocarpa
POPTR_0014s16230
N
0.000
Pm015021
Prunus mume
Pm015021
N
0.000
Pm012019
Prunus mume
Pm012019
N
0.000
PRUPE_ppa003702mg
Prunus persica
PRUPE_ppa003702mg
N
0.000
PRUPE_ppa004136mg
Prunus persica
PRUPE_ppa004136mg
N
0.000
27613.m000642
Ricinus communis
27613.m000642
N
0.000
29949.m000124
Ricinus communis
29949.m000124
N
0.000
SapurV1A.0030s0420
Salix purpurea
SapurV1A.0030s0420
N
0.000
SapurV1A.0054s0160
Salix purpurea
SapurV1A.0054s0160
N
0.000
Solyc07g065270.1
Solanum lycopersicum
Solyc07g065270.1
N
0.000
Solyc07g047950.1
Solanum lycopersicum
Solyc07g047950.1
N
0.000
PGSC0003DMG400022187
Solanum tuberosum
PGSC0003DMG400022187
N
0.000
PGSC0003DMG400006132
Solanum tuberosum
PGSC0003DMG400006132
N
0.000
TCM_002319
Theobroma cacao
TCM_002319
N
0.000
TCM_030733
Theobroma cacao
TCM_030733
N
0.000
SCL13
Vitis vinifera
VIT_00s0463g00020
N
0.000
VIT_12s0057g00560
Vitis vinifera
VIT_12s0057g00560
N
0.000
SCL5
Vitis vinifera
VIT_19s0090g01740
N
0.000