KDM2B (Sorex araneus)
CxxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02008 (zf-CXXC) IPR002857 ENSSARG00000008149 T168302_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KDM2B
M01911_2.00 		Homo sapiens
NNNNNNCGN
NCGNNNNNN		 PBM
Weirauch et al.(2014)
pTH9191 		1.000 1.000
kdm2ba
M01909_2.00 		Danio rerio
NNNNCGN
NCGNNNN		 PBM
Weirauch et al.(2014)
pTH8577 		0.979 0.979
FBXL19
M01916_2.00 		Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN		 PBM
Weirauch et al.(2014)
pTH8570 		0.894 0.894
A6H8I1_DANRE
M01906_2.00 		Danio rerio
CGTACGYA
TRCGTACG		 PBM
Weirauch et al.(2014)
pTH9257 		0.851 0.851
KDM2A
M01915_2.00 		Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN		 PBM
Weirauch et al.(2014)
pTH9212 		0.809 0.809
BGIBMGA012843
M01907_2.00 		Bombyx mori
NNCGCGTANVNN
NNBNTACGCGNN		 PBM
Weirauch et al.(2014)
pTH9239 		0.766 0.766
kdm2aa
M01910_2.00 		Danio rerio
NCGNNNNNN
NNNNNNCGN		 PBM
Weirauch et al.(2014)
pTH8585 		0.723 0.723
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSARP00000007374 CxxC 606 652

Links

Other CxxC family TFs
Other Sorex araneus TFs

248 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00137p00104280 Amborella trichopoda AMTR_s00137p00104280 I
fgenesh1_pm.C_scaffold_1003183 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1003183 I
STZ Arabidopsis lyrata fgenesh2_kg.1__2932__AT1G27730.1 I
AZF2 Arabidopsis lyrata fgenesh2_kg.3__2173__AT3G19580.2 I
fgenesh2_kg.4__2705__AT2G45120.1 Arabidopsis lyrata fgenesh2_kg.4__2705__AT2G45120.1 I
scaffold_503291.1 Arabidopsis lyrata scaffold_503291.1 I
C2H2 Arabidopsis lyrata scaffold_600374.1 I
AZF3 Arabidopsis lyrata scaffold_800768.1 I
ZAT10 Arabidopsis thaliana AT1G27730 D
ZAT4 Arabidopsis thaliana AT2G45120 D
AZF2 Arabidopsis thaliana AT3G19580 D
ZAT9 Arabidopsis thaliana AT3G60580 D
ZAT6 Arabidopsis thaliana AT5G04340 D
AZF3 Arabidopsis thaliana AT5G43170 I
AZF1 Arabidopsis thaliana AT5G67450 D
Bostr.13158s0058 Boechera stricta Bostr.13158s0058 I
Bostr.15697s0099 Boechera stricta Bostr.15697s0099 I
Bostr.19424s0704 Boechera stricta Bostr.19424s0704 I
Bostr.2128s0015 Boechera stricta Bostr.2128s0015 I
Bostr.25993s0262 Boechera stricta Bostr.25993s0262 I
Bostr.26675s0176 Boechera stricta Bostr.26675s0176 I
Bostr.3148s0159 Boechera stricta Bostr.3148s0159 I
BRADI1G14750 Brachypodium distachyon BRADI1G14750 I
BRADI1G16010 Brachypodium distachyon BRADI1G16010 I
BRADI4G03340 Brachypodium distachyon BRADI4G03340 I
Bo1g081350 Brassica oleracea Bo1g081350 I
Bo1g113530 Brassica oleracea Bo1g113530 I
Bo2g168030 Brassica oleracea Bo2g168030 I
Bo3g037560 Brassica oleracea Bo3g037560 I
Bo3g142840 Brassica oleracea Bo3g142840 I
Bo4g195370 Brassica oleracea Bo4g195370 I
Bo5g052290 Brassica oleracea Bo5g052290 I
Bo5g113850 Brassica oleracea Bo5g113850 I
Bo7g048650 Brassica oleracea Bo7g048650 I
Bo7g065200 Brassica oleracea Bo7g065200 I
Bo9g019120 Brassica oleracea Bo9g019120 I
Bo9g181170 Brassica oleracea Bo9g181170 I
Bra000372 Brassica rapa Bra000372 I
Bra009464 Brassica rapa Bra009464 I
Bra010922 Brassica rapa Bra010922 I
Bra012914 Brassica rapa Bra012914 I
Bra018817 Brassica rapa Bra018817 I
Bra022436 Brassica rapa Bra022436 I
Bra029985 Brassica rapa Bra029985 I
Bra031834 Brassica rapa Bra031834 I
Bra032845 Brassica rapa Bra032845 I
Bra033666 Brassica rapa Bra033666 I
Bra037845 Brassica rapa Bra037845 I
Bra038219 Brassica rapa Bra038219 I
Bra040325 Brassica rapa Bra040325 I
PK10188.1 Cannabis sativa PK10188.1 I
Cagra.0239s0063 Capsella grandiflora Cagra.0239s0063 I
Cagra.6011s0004 Capsella grandiflora Cagra.6011s0004 I
Cagra.6943s0031 Capsella grandiflora Cagra.6943s0031 I
Cagra.9217s0012 Capsella grandiflora Cagra.9217s0012 I
Carubv10001868m.g Capsella rubella Carubv10001868m.g I
Carubv10014391m.g Capsella rubella Carubv10014391m.g I
Carubv10017660m.g Capsella rubella Carubv10017660m.g I
Carubv10023569m.g Capsella rubella Carubv10023569m.g I
evm.TU.supercontig_2070.1 Carica papaya evm.TU.supercontig_2070.1 I
evm.TU.supercontig_249.7 Carica papaya evm.TU.supercontig_249.7 I
evm.TU.supercontig_6.32 Carica papaya evm.TU.supercontig_6.32 I
Ca_01586 Cicer arietinum Ca_01586 I
Ca_05641 Cicer arietinum Ca_05641 I
Ca_18364 Cicer arietinum Ca_18364 I
Ca_23672 Cicer arietinum Ca_23672 I
Cla001400 Citrullus lanatus Cla001400 I
Cla022966 Citrullus lanatus Cla022966 I
Ciclev10002297m.g Citrus clementina Ciclev10002297m.g I
Ciclev10007101m.g Citrus clementina Ciclev10007101m.g I
Ciclev10020499m.g Citrus clementina Ciclev10020499m.g I
Ciclev10029065m.g Citrus clementina Ciclev10029065m.g I
orange1.1g024499m.g Citrus sinensis orange1.1g024499m.g I
orange1.1g038669m.g Citrus sinensis orange1.1g038669m.g I
orange1.1g044606m.g Citrus sinensis orange1.1g044606m.g I
Cucsa.219210 Cucumis sativus Cucsa.219210 I
Cucsa.352740 Cucumis sativus Cucsa.352740 I
Cucsa.395710 Cucumis sativus Cucsa.395710 I
Eucgr.F02262 Eucalyptus grandis Eucgr.F02262 I
Eucgr.G01247 Eucalyptus grandis Eucgr.G01247 I
Thhalv10001538m.g Eutrema salsugineum Thhalv10001538m.g I
Thhalv10010909m.g Eutrema salsugineum Thhalv10010909m.g I
Thhalv10014546m.g Eutrema salsugineum Thhalv10014546m.g I
Thhalv10021307m.g Eutrema salsugineum Thhalv10021307m.g I
gene02558-v1.0-hybrid Fragaria vesca gene02558-v1.0-hybrid I
GLYMA01G18606 Glycine max GLYMA01G18606 I
GLYMA01G32981 Glycine max GLYMA01G32981 I
GLYMA03G03950 Glycine max GLYMA03G03950 I
GLYMA04G04760 Glycine max GLYMA04G04760 I
GLYMA06G04840 Glycine max GLYMA06G04840 I
GLYMA10G40400 Glycine max GLYMA10G40400 I
GLYMA11G15140 Glycine max GLYMA11G15140 I
GLYMA14G09760 Glycine max GLYMA14G09760 I
GLYMA17G35430 Glycine max GLYMA17G35430 I
Gorai.001G175400 Gossypium raimondii Gorai.001G175400 I
Gorai.002G132600 Gossypium raimondii Gorai.002G132600 I
Gorai.004G164000 Gossypium raimondii Gorai.004G164000 I
Gorai.005G232300 Gossypium raimondii Gorai.005G232300 I
Gorai.008G020700 Gossypium raimondii Gorai.008G020700 I
Gorai.010G025200 Gossypium raimondii Gorai.010G025200 I
Gorai.013G050100 Gossypium raimondii Gorai.013G050100 I
MLOC_51405 Hordeum vulgare MLOC_51405 I
MLOC_54674 Hordeum vulgare MLOC_54674 I
MLOC_70662 Hordeum vulgare MLOC_70662 I
LPERR03G19200 Leersia perrieri LPERR03G19200 I
LPERR03G21480 Leersia perrieri LPERR03G21480 I
Lus10009278.g Linum usitatissimum Lus10009278.g I
Lus10015888.g Linum usitatissimum Lus10015888.g I
chr1.CM0050.50.nc Lotus japonicus chr1.CM0050.50.nc I
chr5.CM0096.480.nc Lotus japonicus chr5.CM0096.480.nc I
chr5.CM0200.550.nc Lotus japonicus chr5.CM0200.550.nc I
MDP0000198015 Malus domestica MDP0000198015 I
MDP0000319225 Malus domestica MDP0000319225 I
MDP0000573176 Malus domestica MDP0000573176 I
MDP0000762756 Malus domestica MDP0000762756 I
cassava12475.valid.m1 Manihot esculenta cassava12475.valid.m1 I
cassava21316.m1 Manihot esculenta cassava21316.m1 I
cassava32957.m1 Manihot esculenta cassava32957.m1 I
cassava35732.valid.m1 Manihot esculenta cassava35732.valid.m1 I
cassava43667.valid.m1 Manihot esculenta cassava43667.valid.m1 I
MTR_0160s0030 Medicago truncatula MTR_0160s0030 I
MTR_1g018420 Medicago truncatula MTR_1g018420 I
MTR_1g106730 Medicago truncatula MTR_1g106730 I
MTR_3g102980 Medicago truncatula MTR_3g102980 I
MTR_4g027440 Medicago truncatula MTR_4g027440 I
mgf006006m Mimulus guttatus mgf006006m I
GSMUA_Achr2G13410_001 Musa acuminata GSMUA_Achr2G13410_001 I
GSMUA_Achr5G08730_001 Musa acuminata GSMUA_Achr5G08730_001 I
OBART03G22570 Oryza barthii OBART03G22570 I
OB03G31780 Oryza brachyantha OB03G31780 I
OB03G42170 Oryza brachyantha OB03G42170 I
ORGLA03G0210300 Oryza glaberrima ORGLA03G0210300 I
OGLUM03G23350 Oryza glumaepatula OGLUM03G23350 I
BGIOSGA010468 Oryza indica BGIOSGA010468 I
OLONG_027628 Oryza longistaminata OLONG_027628 I
OPUNC12G15600 Oryza punctata OPUNC12G15600 I
ORUFI03G23240 Oryza rufipogon ORUFI03G23240 I
OS03G0437200 Oryza sativa OS03G0437200 I
OS12G0583700 Oryza sativa OS12G0583700 I
Pavir.J15304 Panicum virgatum Pavir.J15304 N
Pavir.J16973 Panicum virgatum Pavir.J16973 N
POPTR_0001s00800 Populus trichocarpa POPTR_0001s00800 I
POPTR_0002s12010 Populus trichocarpa POPTR_0002s12010 I
POPTR_0002s14460 Populus trichocarpa POPTR_0002s14460 I
POPTR_0009s09250 Populus trichocarpa POPTR_0009s09250 I
POPTR_0014s01760 Populus trichocarpa POPTR_0014s01760 I
Pm005390 Prunus mume Pm005390 I
Pm021284 Prunus mume Pm021284 I
PRUPE_ppa009924mg Prunus persica PRUPE_ppa009924mg I
PRUPE_ppa011060mg Prunus persica PRUPE_ppa011060mg I
28152.m000908 Ricinus communis 28152.m000908 I
29661.m000908 Ricinus communis 29661.m000908 I
30147.m014242 Ricinus communis 30147.m014242 I
30170.m013751 Ricinus communis 30170.m013751 I
SapurV1A.0005s0440 Salix purpurea SapurV1A.0005s0440 I
SapurV1A.0019s0280 Salix purpurea SapurV1A.0019s0280 I
SapurV1A.0033s0440 Salix purpurea SapurV1A.0033s0440 I
SapurV1A.0248s0230 Salix purpurea SapurV1A.0248s0230 I
SapurV1A.0845s0100 Salix purpurea SapurV1A.0845s0100 I
SapurV1A.1544s0070 Salix purpurea SapurV1A.1544s0070 I
SapurV1A.1944s0060 Salix purpurea SapurV1A.1944s0060 I
Si023013m.g Setaria italica Si023013m.g I
Solyc01g090840.2 Solanum lycopersicum Solyc01g090840.2 I
Solyc01g107170.2 Solanum lycopersicum Solyc01g107170.2 I
Solyc12g088390.1 Solanum lycopersicum Solyc12g088390.1 I
PGSC0003DMG400002383 Solanum tuberosum PGSC0003DMG400002383 I
PGSC0003DMG400011548 Solanum tuberosum PGSC0003DMG400011548 I
PGSC0003DMG400026020 Solanum tuberosum PGSC0003DMG400026020 I
PGSC0003DMG400028275 Solanum tuberosum PGSC0003DMG400028275 I
PGSC0003DMG400034322 Solanum tuberosum PGSC0003DMG400034322 I
PGSC0003DMG400041467 Solanum tuberosum PGSC0003DMG400041467 I
PGSC0003DMG400045547 Solanum tuberosum PGSC0003DMG400045547 I
Sb02g038000 Sorghum bicolor Sb02g038000 N
TCM_000780 Theobroma cacao TCM_000780 I
TCM_007214 Theobroma cacao TCM_007214 I
TCM_034720 Theobroma cacao TCM_034720 I
Traes_2BS_DD07C2EE6 Triticum aestivum Traes_2BS_DD07C2EE6 N
Traes_4BS_FE945D2FC Triticum aestivum Traes_4BS_FE945D2FC I
VIT_03s0091g00690 Vitis vinifera VIT_03s0091g00690 I
VIT_07s0129g00240 Vitis vinifera VIT_07s0129g00240 I
VIT_15s0021g02720 Vitis vinifera VIT_15s0021g02720 I
VIT_18s0001g09230 Vitis vinifera VIT_18s0001g09230 I
AC211702.2_FG002 Zea mays AC211702.2_FG002 I
GRMZM2G455889 Zea mays GRMZM2G455889 I