Ciclev10007927m.g (Citrus clementina)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Ciclev10007927m.g T202384_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10007927m GRAS 175 545
Ciclev10007943m GRAS 170 540

Links

Other GRAS family TFs
Other Citrus clementina TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.702
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.759
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.726
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.724
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.724
SCL5 Arabidopsis thaliana AT1G50600 N 0.724
PAT1 Arabidopsis thaliana AT5G48150 N 0.737
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.724
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.729
Bo2g149670 Brassica oleracea Bo2g149670 N 0.718
Bo6g022330 Brassica oleracea Bo6g022330 N 0.724
Bo7g089080 Brassica oleracea Bo7g089080 N 0.700
Bo9g009240 Brassica oleracea Bo9g009240 N 0.740
Bo9g009260 Brassica oleracea Bo9g009260 N 0.718
Bra018860 Brassica rapa Bra018860 N 0.724
Bra020715 Brassica rapa Bra020715 N 0.718
Bra026077 Brassica rapa Bra026077 N 0.733
Bra036185 Brassica rapa Bra036185 N 0.715
Bra037509 Brassica rapa Bra037509 N 0.709
PK09018.1 Cannabis sativa PK09018.1 N 0.743
PK15082.1 Cannabis sativa PK15082.1 N 0.740
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.732
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N 0.715
Carubv10008830m.g Capsella rubella Carubv10008830m.g N 0.715
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.732
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.780
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.762
Ca_09786 Cicer arietinum Ca_09786 N 0.770
Ca_13855 Cicer arietinum Ca_13855 N 0.710
Cla001429 Citrullus lanatus Cla001429 N 0.740
Cla004565 Citrullus lanatus Cla004565 N 0.729
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.743
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.748
orange1.1g046067m.g Citrus sinensis orange1.1g046067m.g N 0.781
Cucsa.042310 Cucumis sativus Cucsa.042310 N 0.715
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.734
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.753
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N 0.737
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.703
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N 0.726
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.772
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.775
GLYMA02G46730 Glycine max GLYMA02G46730 N 0.718
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.770
GLYMA09G22110 Glycine max GLYMA09G22110 N 0.706
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.778
GLYMA14G01960 Glycine max GLYMA14G01960 N 0.713
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.786
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.797
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.772
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.791
MLOC_65838 Hordeum vulgare MLOC_65838 N 0.705
Lus10003772.g Linum usitatissimum Lus10003772.g N 0.734
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.756
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.735
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.745
LjSGA_018703.2 Lotus japonicus LjSGA_018703.2 N 0.713
MDP0000152670 Malus domestica MDP0000152670 N 0.767
MDP0000205236 Malus domestica MDP0000205236 N 0.764
MDP0000284679 Malus domestica MDP0000284679 N 0.764
MDP0000804652 Malus domestica MDP0000804652 N 0.767
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.783
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.780
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.780
MTR_5g094450 Medicago truncatula MTR_5g094450 N 0.721
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.775
ORGLA07G0258500 Oryza glaberrima ORGLA07G0258500 N 0.702
OGLUM07G19910 Oryza glumaepatula OGLUM07G19910 N 0.702
BGIOSGA026022 Oryza indica BGIOSGA026022 N 0.702
OMERI07G16830 Oryza meridionalis OMERI07G16830 N 0.705
OMERI10G05450 Oryza meridionalis OMERI10G05450 N 0.706
ONIVA07G18570 Oryza nivara ONIVA07G18570 N 0.702
OPUNC07G19030 Oryza punctata OPUNC07G19030 N 0.710
ORUFI07G20980 Oryza rufipogon ORUFI07G20980 N 0.702
CIGR2 Oryza sativa OS07G0583600 N 0.721
Pavir.Ba00562 Panicum virgatum Pavir.Ba00562 N 0.715
Pavir.Bb03224 Panicum virgatum Pavir.Bb03224 N 0.713
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.724
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.767
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.770
Pm012019 Prunus mume Pm012019 N 0.786
Pm015021 Prunus mume Pm015021 N 0.770
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.770
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.753
27613.m000642 Ricinus communis 27613.m000642 N 0.783
29949.m000124 Ricinus communis 29949.m000124 N 0.761
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.764
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.770
Si029418m.g Setaria italica Si029418m.g N 0.710
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.743
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.737
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.743
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N 0.729
Sb02g037650 Sorghum bicolor Sb02g037650 N 0.715
TCM_002319 Theobroma cacao TCM_002319 N 0.780
TCM_030733 Theobroma cacao TCM_030733 N 0.827
Traes_2BS_D007D6598 Triticum aestivum Traes_2BS_D007D6598 N 0.702
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.772
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.767
GRMZM2G098517 Zea mays GRMZM2G098517 N 0.707
GRMZM2G431309 Zea mays GRMZM2G431309 N 0.718