ENSCPOG00000020879 (Cavia porcellus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSCPOG00000020879 T327769_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hmg20b
M02487_2.00 		Mus musculus
NNATTATWHWN
NWDWATAATNN		 PBM
Weirauch et al.(2014)
pTH8555 		0.557 0.565
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000018767 Sox 22 90

Links

Other Sox family TFs
Other Cavia porcellus TFs

161 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000005678 Ailuropoda melanoleuca ENSAMEG00000005678 I 0.557
ENSAMEG00000008348 Ailuropoda melanoleuca ENSAMEG00000008348 I 0.514
ENSAMEG00000010946 Ailuropoda melanoleuca ENSAMEG00000010946 I 0.704
Alligator_sinensis_CCG000441.1 Alligator sinensis Alligator_sinensis_CCG000441.1 I 0.557
Alligator_sinensis_CCG010545.1 Alligator sinensis Alligator_sinensis_CCG010545.1 I 0.522
ENSAPLG00000005528 Anas platyrhynchos ENSAPLG00000005528 I 0.557
ENSAPLG00000015603 Anas platyrhynchos ENSAPLG00000015603 I 0.522
HMG20A Anolis carolinensis ENSACAG00000011520 I 0.522
Afo_R007008 Aptenodytes forsteri Afo_R007008 I 0.522
Afo_R007636 Aptenodytes forsteri Afo_R007636 I 0.557
ENSAMXG00000013048 Astyanax mexicanus ENSAMXG00000013048 I 0.553
ENSAMXG00000017986 Astyanax mexicanus ENSAMXG00000017986 I 0.565
BGIBMGA005325 Bombyx mori BGIBMGA005325 I 0.418
ENSP00000336856-D1 Bos grunniens ENSP00000336856-D1 I 0.514
HMG20A Bos taurus ENSBTAG00000020441 I 0.514
ENSBTAG00000047668 Bos taurus ENSBTAG00000047668 I 0.557
estExt_fgenesh2_pg.C_1350020 Branchiostoma floridae estExt_fgenesh2_pg.C_1350020 I 0.538
estExt_fgenesh2_pg.C_2300011 Branchiostoma floridae estExt_fgenesh2_pg.C_2300011 I 0.545
estExt_fgenesh2_pg.C_2300014 Branchiostoma floridae estExt_fgenesh2_pg.C_2300014 I 0.545
estExt_fgenesh2_pg.C_4800003 Branchiostoma floridae estExt_fgenesh2_pg.C_4800003 I 0.538
Brh_R011859 Buceros rhinoceros Brh_R011859 I 0.522
HMG20B Callithrix jacchus ENSCJAG00000003488 I 0.565
HMG20A Callithrix jacchus ENSCJAG00000011131 I 0.514
Aan_R011684 Calypte anna Aan_R011684 I 0.557
Aan_R011791 Calypte anna Aan_R011791 I 0.522
HMG20A Canis familiaris ENSCAFG00000018061 I 0.514
HMG20B Canis familiaris ENSCAFG00000019215 I 0.557
CapteG191691 Capitella teleta CapteG191691 I 0.449
HMG20B Cavia porcellus ENSCPOG00000010777 I 0.557
HMG20A Cavia porcellus ENSCPOG00000011704 I 0.514
Cmyd_10002377 Chelonia mydas Cmyd_10002377 I 0.557
Cmyd_10009674 Chelonia mydas Cmyd_10009674 I 0.509
Cmyd_10010094 Chelonia mydas Cmyd_10010094 I 0.522
ENSCSAG00000011140 Chlorocebus sabaeus ENSCSAG00000011140 I 0.557
ENSCSAG00000014734 Chlorocebus sabaeus ENSCSAG00000014734 I 0.514
HMG20A Choloepus hoffmanni ENSCHOG00000012116 I 0.514
CLEC002862 Cimex lectularius CLEC002862 I 0.432
hmg20a Danio rerio ENSDARG00000031198 I 0.589
hmg20b Danio rerio ENSDARG00000042045 I 0.565
HMG20A Dasypus novemcinctus ENSDNOG00000034143 I 0.514
Hmg20a Dipodomys ordii ENSDORG00000000623 I 0.514
ENSDORG00000012598 Dipodomys ordii ENSDORG00000012598 I 0.557
HMG20A Echinops telfairi ENSETEG00000015812 I 0.514
HMG20A Erinaceus europaeus ENSEEUG00000004472 I 0.514
HMG20A Felis catus ENSFCAG00000022539 I 0.514
HMG20B Felis catus ENSFCAG00000026167 I 0.557
ENSFALG00000010751 Ficedula albicollis ENSFALG00000010751 I 0.522
ENSFALG00000011609 Ficedula albicollis ENSFALG00000011609 I 0.557
ENSGMOG00000011717 Gadus morhua ENSGMOG00000011717 I 0.530
ENSGMOG00000015452 Gadus morhua ENSGMOG00000015452 I 0.549
ENSGALG00000002746 Gallus gallus ENSGALG00000002746 I 0.522
HMG20B Gallus gallus ENSGALG00000027838 I 0.557
hmg20a Gasterosteus aculeatus ENSGACG00000003466 I 0.553
hmg20b Gasterosteus aculeatus ENSGACG00000012785 I 0.524
Gfo_R004366 Geospiza fortis Gfo_R004366 I 0.491
Gfo_R007604 Geospiza fortis Gfo_R007604 I 0.557
HMG20A Gorilla gorilla ENSGGOG00000008439 I 0.514
HMG20B Gorilla gorilla ENSGGOG00000014805 I 0.557
HHAL010521-PA Halyomorpha halys HHAL010521-PA I 0.429
Hsal_13222--XP_625193.1_APIME Harpegnathos saltator Hsal_13222--XP_625193.1_APIME I 0.436
HMEL017569 Heliconius melpomene HMEL017569 I 0.423
HMG20B Homo sapiens ENSG00000064961 I 0.557
HMG20A Homo sapiens ENSG00000140382 I 0.514
XP_002158984.1 Hydra magnipapillata XP_002158984.1 I 0.483
XP_002161760.1 Hydra magnipapillata XP_002161760.1 I 0.483
ENSSTOG00000013818 Ictidomys tridecemlineatus ENSSTOG00000013818 I 0.514
ENSSTOG00000022314 Ictidomys tridecemlineatus ENSSTOG00000022314 I 0.557
ENSLACG00000004599 Latimeria chalumnae ENSLACG00000004599 I 0.574
ENSLACG00000010699 Latimeria chalumnae ENSLACG00000010699 I 0.607
ENSLOCG00000010117 Lepisosteus oculatus ENSLOCG00000010117 I 0.650
ENSLOCG00000014255 Lepisosteus oculatus ENSLOCG00000014255 I 0.582
LDEC010438 Leptinotarsa decemlineata LDEC010438 I 0.432
LotgiG196090 Lottia gigantea LotgiG196090 I 0.432
LotgiG231408 Lottia gigantea LotgiG231408 I 0.439
HMG20B Loxodonta africana ENSLAFG00000007845 I 0.557
HMG20A Loxodonta africana ENSLAFG00000018273 I 0.514
ENSMMUP00000031974 Macaca fascicularis ENSMMUP00000031974 I 0.437
ENSP00000371133 Macaca fascicularis ENSP00000371133 I 0.514
HMG20A Macaca mulatta ENSMMUG00000007430 I 0.514
ENSMMUG00000028932 Macaca mulatta ENSMMUG00000028932 I 0.437
ENSMEUG00000001270 Macropus eugenii ENSMEUG00000001270 I 0.557
ENSMEUG00000016429 Macropus eugenii ENSMEUG00000016429 I 0.514
HMG20B Meleagris gallopavo ENSMGAG00000001362 I 0.557
HMG20A Meleagris gallopavo ENSMGAG00000003179 I 0.522
MCINX003064 Melitaea cinxia MCINX003064 I 0.437
HMG20A Microcebus murinus ENSMICG00000011025 I 0.514
HMG20B Monodelphis domestica ENSMODG00000006884 I 0.557
HMG20A Monodelphis domestica ENSMODG00000012113 I 0.514
ENSMPUG00000003925 Mustela putorius furo ENSMPUG00000003925 I 0.557
ENSMPUG00000007386 Mustela putorius furo ENSMPUG00000007386 I 0.502
ENSMPUG00000017330 Mustela putorius furo ENSMPUG00000017330 I 0.514
Hmg20b Mus musculus ENSMUSG00000020232 D 0.557
Hmg20a Mus musculus ENSMUSG00000032329 I 0.514
Myotis_brandtii_HMG20A_10005450 Myotis brandtii Myotis_brandtii_HMG20A_10005450 I 0.514
Myotis_brandtii_HMG20B_10016321 Myotis brandtii Myotis_brandtii_HMG20B_10016321 I 0.557
HMG20A Myotis lucifugus ENSMLUG00000011648 I 0.514
HMG20B Myotis lucifugus ENSMLUG00000022392 I 0.557
NV11068 Nasonia vitripennis NV11068 I 0.438
NEMVEDRAFT_v1g105457 Nematostella vectensis NEMVEDRAFT_v1g105457 I 0.538
NEMVEDRAFT_v1g87244 Nematostella vectensis NEMVEDRAFT_v1g87244 I 0.570
ENSNLEG00000008357 Nomascus leucogenys ENSNLEG00000008357 I 0.514
Ocbimv22031259m.g Octopus bimaculoides Ocbimv22031259m.g I 0.467
ENSONIG00000004838 Oreochromis niloticus ENSONIG00000004838 I 0.524
ENSONIG00000012862 Oreochromis niloticus ENSONIG00000012862 I 0.553
HMG20A Ornithorhynchus anatinus ENSOANG00000009993 I 0.514
HMG20B Ornithorhynchus anatinus ENSOANG00000013515 I 0.557
HMG20A Oryctolagus cuniculus ENSOCUG00000005648 I 0.514
hmg20a Oryzias latipes ENSORLG00000001794 I 0.553
hmg20b Oryzias latipes ENSORLG00000004640 I 0.524
HMG20A Otolemur garnettii ENSOGAG00000006630 I 0.514
HMG20B Otolemur garnettii ENSOGAG00000014171 I 0.557
ENSOARG00000001765 Ovis aries ENSOARG00000001765 I 0.514
ENSOARG00000005838 Ovis aries ENSOARG00000005838 I 0.661
ENSOARG00000012318 Ovis aries ENSOARG00000012318 I 0.557
HMG20A Pan troglodytes ENSPTRG00000007326 I 0.514
ENSPANG00000010575 Papio anubis ENSPANG00000010575 I 0.557
ENSPANG00000015844 Papio anubis ENSPANG00000015844 I 0.514
ENSPSIG00000010923 Pelodiscus sinensis ENSPSIG00000010923 I 0.557
ENSPSIG00000013006 Pelodiscus sinensis ENSPSIG00000013006 I 0.522
ENSPFOG00000003017 Poecilia formosa ENSPFOG00000003017 I 0.524
ENSPFOG00000014087 Poecilia formosa ENSPFOG00000014087 I 0.553
Pvit_01997 Pogona vitticeps Pvit_01997 I 0.522
Pvit_08123 Pogona vitticeps Pvit_08123 I 0.557
ENSPPYG00000006683 Pongo abelii ENSPPYG00000006683 I 0.514
ENSPPYG00000009378 Pongo abelii ENSPPYG00000009378 I 0.557
HMG20B Procavia capensis ENSPCAG00000010772 I 0.557
HMG20A Procavia capensis ENSPCAG00000013879 I 0.514
Hmg20a Rattus norvegicus ENSRNOG00000016905 I 0.514
Hmg20b Rattus norvegicus ENSRNOG00000020601 I 0.557
Sakowv30005216m.g Saccoglossus kowalevskii Sakowv30005216m.g I 0.455
Sakowv30033800m.g Saccoglossus kowalevskii Sakowv30033800m.g I 0.470
ENSSHAG00000007226 Sarcophilus harrisii ENSSHAG00000007226 I 0.557
ENSSHAG00000012311 Sarcophilus harrisii ENSSHAG00000012311 I 0.514
HMG20A Sorex araneus ENSSARG00000012609 I 0.474
SMAR000790 Strigamia maritima SMAR000790 I 0.532
SMAR002604 Strigamia maritima SMAR002604 I 0.415
SPU_004776 Strongylocentrotus purpuratus SPU_004776 I 0.558
SPU_018371 Strongylocentrotus purpuratus SPU_018371 I 0.558
HMG20A Sus scrofa ENSSSCG00000001871 I 0.514
ENSSSCG00000024002 Sus scrofa ENSSSCG00000024002 I 0.514
HMG20B Taeniopygia guttata ENSTGUG00000000169 I 0.557
HMG20A Taeniopygia guttata ENSTGUG00000003690 I 0.522
hmg20a Takifugu rubripes ENSTRUG00000016127 I 0.553
eef2l2 Takifugu rubripes ENSTRUG00000017921 I 0.524
ENSTSYG00000003485 Tarsius syrichta ENSTSYG00000003485 I 0.514
hmg20a Tetraodon nigroviridis ENSTNIG00000008460 I 0.553
hmg20b Tetraodon nigroviridis ENSTNIG00000010630 I 0.524
TriadG23407 Trichoplax adhaerens TriadG23407 I 0.501
HMG20A Tupaia belangeri ENSTBEG00000015283 I 0.514
HMG20A Tursiops truncatus ENSTTRG00000006500 I 0.514
HMG20B Tursiops truncatus ENSTTRG00000008832 I 0.557
Tal_R006697 Tyto alba Tal_R006697 I 0.522
HMG20A Vicugna pacos ENSVPAG00000010013 I 0.514
hmg20b.S Xenopus laevis XB-GENE-17338323 I 0.563
hmg20b.L Xenopus laevis XB-GENE-5809135 I 0.563
hmg20a.L Xenopus laevis XB-GENE-955359 I 0.595
hmg20b Xenopus tropicalis XB-GENE-5809048 I 0.563
hmg20a Xenopus tropicalis XB-GENE-955353 I 0.595
ENSXMAG00000000587 Xiphophorus maculatus ENSXMAG00000000587 I 0.553
ENSXMAG00000012647 Xiphophorus maculatus ENSXMAG00000012647 I 0.524
L798_15457 Zootermopsis nevadensis L798_15457 I 0.475