ENSLOCG00000010117 (Lepisosteus oculatus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSLOCG00000010117 T328277_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hmg20b
M02487_2.00 		Mus musculus
NNATTATWHWN
NWDWATAATNN		 PBM
Weirauch et al.(2014)
pTH8555 		0.566 0.594
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLOCP00000012375 Sox 63 131

Links

Other Sox family TFs
Other Lepisosteus oculatus TFs

163 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000005678 Ailuropoda melanoleuca ENSAMEG00000005678 I 0.566
ENSAMEG00000008348 Ailuropoda melanoleuca ENSAMEG00000008348 I 0.516
ENSAMEG00000010946 Ailuropoda melanoleuca ENSAMEG00000010946 I 0.656
Alligator_sinensis_CCG000441.1 Alligator sinensis Alligator_sinensis_CCG000441.1 I 0.566
Alligator_sinensis_CCG010545.1 Alligator sinensis Alligator_sinensis_CCG010545.1 I 0.525
ENSAPLG00000005528 Anas platyrhynchos ENSAPLG00000005528 I 0.566
ENSAPLG00000015603 Anas platyrhynchos ENSAPLG00000015603 I 0.525
HMG20A Anolis carolinensis ENSACAG00000011520 I 0.525
Afo_R007008 Aptenodytes forsteri Afo_R007008 I 0.525
Afo_R007636 Aptenodytes forsteri Afo_R007636 I 0.566
ENSAMXG00000013048 Astyanax mexicanus ENSAMXG00000013048 I 0.551
ENSAMXG00000017986 Astyanax mexicanus ENSAMXG00000017986 I 0.574
BGIBMGA005325 Bombyx mori BGIBMGA005325 I 0.420
ENSP00000336856-D1 Bos grunniens ENSP00000336856-D1 I 0.516
HMG20A Bos taurus ENSBTAG00000020441 I 0.516
ENSBTAG00000047668 Bos taurus ENSBTAG00000047668 I 0.566
estExt_fgenesh2_pg.C_1350020 Branchiostoma floridae estExt_fgenesh2_pg.C_1350020 I 0.615
estExt_fgenesh2_pg.C_2300011 Branchiostoma floridae estExt_fgenesh2_pg.C_2300011 I 0.559
estExt_fgenesh2_pg.C_2300014 Branchiostoma floridae estExt_fgenesh2_pg.C_2300014 I 0.559
estExt_fgenesh2_pg.C_4800003 Branchiostoma floridae estExt_fgenesh2_pg.C_4800003 I 0.615
Brh_R011859 Buceros rhinoceros Brh_R011859 I 0.525
HMG20B Callithrix jacchus ENSCJAG00000003488 I 0.574
HMG20A Callithrix jacchus ENSCJAG00000011131 I 0.516
Aan_R011684 Calypte anna Aan_R011684 I 0.566
Aan_R011791 Calypte anna Aan_R011791 I 0.525
HMG20A Canis familiaris ENSCAFG00000018061 I 0.516
HMG20B Canis familiaris ENSCAFG00000019215 I 0.566
CapteG191691 Capitella teleta CapteG191691 I 0.484
HMG20B Cavia porcellus ENSCPOG00000010777 I 0.566
HMG20A Cavia porcellus ENSCPOG00000011704 I 0.516
ENSCPOG00000020879 Cavia porcellus ENSCPOG00000020879 I 0.650
Cmyd_10002377 Chelonia mydas Cmyd_10002377 I 0.566
Cmyd_10009674 Chelonia mydas Cmyd_10009674 I 0.564
Cmyd_10010094 Chelonia mydas Cmyd_10010094 I 0.525
ENSCSAG00000011140 Chlorocebus sabaeus ENSCSAG00000011140 I 0.566
ENSCSAG00000014734 Chlorocebus sabaeus ENSCSAG00000014734 I 0.516
HMG20A Choloepus hoffmanni ENSCHOG00000012116 I 0.516
CLEC002862 Cimex lectularius CLEC002862 I 0.424
CGI_10028818 Crassostrea gigas CGI_10028818 I 0.488
hmg20a Danio rerio ENSDARG00000031198 I 0.587
hmg20b Danio rerio ENSDARG00000042045 I 0.574
HMG20A Dasypus novemcinctus ENSDNOG00000034143 I 0.516
YQE_10385 Dendroctonus ponderosae YQE_10385 I 0.455
Hmg20a Dipodomys ordii ENSDORG00000000623 I 0.516
ENSDORG00000012598 Dipodomys ordii ENSDORG00000012598 I 0.566
HMG20A Echinops telfairi ENSETEG00000015812 I 0.516
HMG20A Erinaceus europaeus ENSEEUG00000004472 I 0.516
HMG20A Felis catus ENSFCAG00000022539 I 0.516
HMG20B Felis catus ENSFCAG00000026167 I 0.566
ENSFALG00000010751 Ficedula albicollis ENSFALG00000010751 I 0.525
ENSFALG00000011609 Ficedula albicollis ENSFALG00000011609 I 0.566
ENSGMOG00000011717 Gadus morhua ENSGMOG00000011717 I 0.567
ENSGMOG00000015452 Gadus morhua ENSGMOG00000015452 I 0.555
ENSGALG00000002746 Gallus gallus ENSGALG00000002746 I 0.525
HMG20B Gallus gallus ENSGALG00000027838 I 0.566
hmg20a Gasterosteus aculeatus ENSGACG00000003466 I 0.551
hmg20b Gasterosteus aculeatus ENSGACG00000012785 I 0.558
Gfo_R004366 Geospiza fortis Gfo_R004366 I 0.494
Gfo_R007604 Geospiza fortis Gfo_R007604 I 0.566
HMG20A Gorilla gorilla ENSGGOG00000008439 I 0.516
HMG20B Gorilla gorilla ENSGGOG00000014805 I 0.566
HHAL010521-PA Halyomorpha halys HHAL010521-PA I 0.427
Hsal_13222--XP_625193.1_APIME Harpegnathos saltator Hsal_13222--XP_625193.1_APIME I 0.433
HMEL017569 Heliconius melpomene HMEL017569 I 0.420
HMG20B Homo sapiens ENSG00000064961 I 0.566
HMG20A Homo sapiens ENSG00000140382 I 0.516
XP_002158984.1 Hydra magnipapillata XP_002158984.1 I 0.460
XP_002161760.1 Hydra magnipapillata XP_002161760.1 I 0.460
ENSSTOG00000013818 Ictidomys tridecemlineatus ENSSTOG00000013818 I 0.516
ENSSTOG00000022314 Ictidomys tridecemlineatus ENSSTOG00000022314 I 0.566
ENSLACG00000004599 Latimeria chalumnae ENSLACG00000004599 I 0.571
ENSLACG00000010699 Latimeria chalumnae ENSLACG00000010699 I 0.658
ENSLOCG00000014255 Lepisosteus oculatus ENSLOCG00000014255 I 0.580
LDEC010438 Leptinotarsa decemlineata LDEC010438 I 0.494
LotgiG196090 Lottia gigantea LotgiG196090 I 0.437
LotgiG231408 Lottia gigantea LotgiG231408 I 0.508
HMG20B Loxodonta africana ENSLAFG00000007845 I 0.566
HMG20A Loxodonta africana ENSLAFG00000018273 I 0.516
ENSMMUP00000031974 Macaca fascicularis ENSMMUP00000031974 I 0.446
ENSP00000371133 Macaca fascicularis ENSP00000371133 I 0.516
HMG20A Macaca mulatta ENSMMUG00000007430 I 0.516
ENSMMUG00000028932 Macaca mulatta ENSMMUG00000028932 I 0.446
ENSMEUG00000001270 Macropus eugenii ENSMEUG00000001270 I 0.566
ENSMEUG00000016429 Macropus eugenii ENSMEUG00000016429 I 0.516
HMG20B Meleagris gallopavo ENSMGAG00000001362 I 0.566
HMG20A Meleagris gallopavo ENSMGAG00000003179 I 0.525
MCINX003064 Melitaea cinxia MCINX003064 I 0.439
HMG20A Microcebus murinus ENSMICG00000011025 I 0.516
HMG20B Monodelphis domestica ENSMODG00000006884 I 0.566
HMG20A Monodelphis domestica ENSMODG00000012113 I 0.516
ENSMPUG00000003925 Mustela putorius furo ENSMPUG00000003925 I 0.566
ENSMPUG00000007386 Mustela putorius furo ENSMPUG00000007386 I 0.494
ENSMPUG00000017330 Mustela putorius furo ENSMPUG00000017330 I 0.516
Hmg20b Mus musculus ENSMUSG00000020232 D 0.566
Hmg20a Mus musculus ENSMUSG00000032329 I 0.516
Myotis_brandtii_HMG20A_10005450 Myotis brandtii Myotis_brandtii_HMG20A_10005450 I 0.516
Myotis_brandtii_HMG20B_10016321 Myotis brandtii Myotis_brandtii_HMG20B_10016321 I 0.566
HMG20A Myotis lucifugus ENSMLUG00000011648 I 0.516
HMG20B Myotis lucifugus ENSMLUG00000022392 I 0.566
NV11068 Nasonia vitripennis NV11068 I 0.432
NEMVEDRAFT_v1g105457 Nematostella vectensis NEMVEDRAFT_v1g105457 I 0.536
NEMVEDRAFT_v1g87244 Nematostella vectensis NEMVEDRAFT_v1g87244 I 0.581
ENSNLEG00000008357 Nomascus leucogenys ENSNLEG00000008357 I 0.516
Ocbimv22031259m.g Octopus bimaculoides Ocbimv22031259m.g I 0.472
ENSONIG00000004838 Oreochromis niloticus ENSONIG00000004838 I 0.558
ENSONIG00000012862 Oreochromis niloticus ENSONIG00000012862 I 0.551
HMG20A Ornithorhynchus anatinus ENSOANG00000009993 I 0.516
HMG20B Ornithorhynchus anatinus ENSOANG00000013515 I 0.566
HMG20A Oryctolagus cuniculus ENSOCUG00000005648 I 0.516
hmg20a Oryzias latipes ENSORLG00000001794 I 0.551
hmg20b Oryzias latipes ENSORLG00000004640 I 0.558
HMG20A Otolemur garnettii ENSOGAG00000006630 I 0.516
HMG20B Otolemur garnettii ENSOGAG00000014171 I 0.566
ENSOARG00000001765 Ovis aries ENSOARG00000001765 I 0.516
ENSOARG00000005838 Ovis aries ENSOARG00000005838 I 0.667
ENSOARG00000012318 Ovis aries ENSOARG00000012318 I 0.566
HMG20A Pan troglodytes ENSPTRG00000007326 I 0.516
ENSPANG00000010575 Papio anubis ENSPANG00000010575 I 0.566
ENSPANG00000015844 Papio anubis ENSPANG00000015844 I 0.516
ENSPSIG00000010923 Pelodiscus sinensis ENSPSIG00000010923 I 0.566
ENSPSIG00000013006 Pelodiscus sinensis ENSPSIG00000013006 I 0.525
ENSPFOG00000003017 Poecilia formosa ENSPFOG00000003017 I 0.558
ENSPFOG00000014087 Poecilia formosa ENSPFOG00000014087 I 0.551
Pvit_01997 Pogona vitticeps Pvit_01997 I 0.525
Pvit_08123 Pogona vitticeps Pvit_08123 I 0.566
ENSPPYG00000006683 Pongo abelii ENSPPYG00000006683 I 0.516
ENSPPYG00000009378 Pongo abelii ENSPPYG00000009378 I 0.566
HMG20B Procavia capensis ENSPCAG00000010772 I 0.566
HMG20A Procavia capensis ENSPCAG00000013879 I 0.516
Hmg20a Rattus norvegicus ENSRNOG00000016905 I 0.516
Hmg20b Rattus norvegicus ENSRNOG00000020601 I 0.566
Sakowv30005216m.g Saccoglossus kowalevskii Sakowv30005216m.g I 0.525
Sakowv30033800m.g Saccoglossus kowalevskii Sakowv30033800m.g I 0.490
ENSSHAG00000007226 Sarcophilus harrisii ENSSHAG00000007226 I 0.566
ENSSHAG00000012311 Sarcophilus harrisii ENSSHAG00000012311 I 0.516
HMG20A Sorex araneus ENSSARG00000012609 I 0.476
SMAR000790 Strigamia maritima SMAR000790 I 0.588
SPU_004776 Strongylocentrotus purpuratus SPU_004776 I 0.538
SPU_018371 Strongylocentrotus purpuratus SPU_018371 I 0.538
HMG20A Sus scrofa ENSSSCG00000001871 I 0.516
ENSSSCG00000024002 Sus scrofa ENSSSCG00000024002 I 0.516
HMG20B Taeniopygia guttata ENSTGUG00000000169 I 0.566
HMG20A Taeniopygia guttata ENSTGUG00000003690 I 0.525
hmg20a Takifugu rubripes ENSTRUG00000016127 I 0.551
eef2l2 Takifugu rubripes ENSTRUG00000017921 I 0.565
ENSTSYG00000003485 Tarsius syrichta ENSTSYG00000003485 I 0.516
hmg20a Tetraodon nigroviridis ENSTNIG00000008460 I 0.551
hmg20b Tetraodon nigroviridis ENSTNIG00000010630 I 0.565
TC011144 Tribolium castaneum TC011144 N 0.472
TriadG23407 Trichoplax adhaerens TriadG23407 I 0.498
HMG20A Tupaia belangeri ENSTBEG00000015283 I 0.516
HMG20A Tursiops truncatus ENSTTRG00000006500 I 0.516
HMG20B Tursiops truncatus ENSTTRG00000008832 I 0.566
Tal_R006697 Tyto alba Tal_R006697 I 0.525
HMG20A Vicugna pacos ENSVPAG00000010013 I 0.516
hmg20b.S Xenopus laevis XB-GENE-17338323 I 0.566
hmg20b.L Xenopus laevis XB-GENE-5809135 I 0.566
hmg20a.L Xenopus laevis XB-GENE-955359 I 0.565
hmg20b Xenopus tropicalis XB-GENE-5809048 I 0.566
hmg20a Xenopus tropicalis XB-GENE-955353 I 0.565
ENSXMAG00000000587 Xiphophorus maculatus ENSXMAG00000000587 I 0.551
ENSXMAG00000012647 Xiphophorus maculatus ENSXMAG00000012647 I 0.558
L798_15457 Zootermopsis nevadensis L798_15457 I 0.445