Bo1g117490 (Brassica oleracea)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 Bo1g117490 T343723_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TB1
M01312_2.00 		Oryza sativa
GGSCCCCCYM
KRGGGGGSCC		 PBM
Lambert et al.(2019)
pTH8740 		0.828 0.404
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo1g117490.1 TCP 150 311

Links

Other TCP family TFs
Other Brassica oleracea TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_01923 Aegilops tauschii F775_01923 I 0.847
BRC1 Arabidopsis lyrata scaffold_302193.1 N 0.957
BRC1 Arabidopsis thaliana AT3G18550 I 0.963
Bostr.19424s0807 Boechera stricta Bostr.19424s0807 I 0.949
Bo3g071560 Brassica oleracea Bo3g071560 I 0.961
Bo5g117410 Brassica oleracea Bo5g117410 N 0.958
Bra001710 Brassica rapa Bra001710 I 0.965
Bra037579 Brassica rapa Bra037579 I 0.982
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.958
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.958
evm.TU.supercontig_13.48 Carica papaya evm.TU.supercontig_13.48 N 0.889
Cla019282 Citrullus lanatus Cla019282 N 0.848
Cla018797 Citrullus lanatus Cla018797 N 0.853
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.832
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.832
Cucsa.113660 Cucumis sativus Cucsa.113660 N 0.877
Cucsa.198860 Cucumis sativus Cucsa.198860 N 0.864
Eucgr.K02654 Eucalyptus grandis Eucgr.K02654 I 0.823
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.837
Thhalv10021948m.g Eutrema salsugineum Thhalv10021948m.g N 0.967
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.867
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.868
GLYMA06G23410 Glycine max GLYMA06G23410 N 0.853
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.844
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.862
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.863
MLOC_4614 Hordeum vulgare MLOC_4614 I 0.830
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I 0.852
MDP0000224810 Malus domestica MDP0000224810 N 0.835
MDP0000219838 Malus domestica MDP0000219838 N 0.836
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.838
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.848
MTR_4g111935 Medicago truncatula MTR_4g111935 I 0.866
OBART03G31290 Oryza barthii OBART03G31290 I 0.829
ORGLA03G0289500 Oryza glaberrima ORGLA03G0289500 I 0.829
OGLUM03G31540 Oryza glumaepatula OGLUM03G31540 I 0.828
BGIOSGA013417 Oryza indica BGIOSGA013417 I 0.828
OMERI03G27910 Oryza meridionalis OMERI03G27910 I 0.829
ONIVA03G32600 Oryza nivara ONIVA03G32600 I 0.828
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.848
OPUNC08G13710 Oryza punctata OPUNC08G13710 I 0.826
ORUFI03G32570 Oryza rufipogon ORUFI03G32570 I 0.828
TB1 Oryza sativa OS03G0706500 D 0.828
Pavir.Fa00870 Panicum virgatum Pavir.Fa00870 I 0.832
Pavir.Ib04362 Panicum virgatum Pavir.Ib04362 I 0.827
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.832
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.825
30174.m008721 Ricinus communis 30174.m008721 I 0.838
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.829
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.825
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.829
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.829
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.824
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.822
TCM_012252 Theobroma cacao TCM_012252 I 0.879
Traes_5BL_19F383CC71 Triticum aestivum Traes_5BL_19F383CC71 I 0.833
TRIUR3_20728 Triticum urartu TRIUR3_20728 I 0.836
GRMZM2G055024 Zea mays GRMZM2G055024 I 0.830