Bra011485 (Brassica rapa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Bra011485 T057434_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS08G0471950
M10047_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TRAB1_Q2 		0.817 0.650
ABF2
M01771_2.00 		Arabidopsis thaliana
NNYACGTGTHNNN
NNNDACACGTRNN		 PBM
Weirauch et al.(2014)
pTH8103 		0.804 0.667
ABF2
M06755_2.00 		Arabidopsis thaliana
NNWNNTGMCACGTSWBMH
DKVWSACGTGKCANNWNN		 Dap-seq
OMalley et al.(2016)
ABF2_col_v3a 		0.804 0.667
PK18009.1
M01158_2.00 		Cannabis sativa
NNACACGTGN
NCACGTGTNN		 PBM
Lambert et al.(2019)
pTH10272 		0.789 0.683
ABF3
M01782_2.00 		Arabidopsis thaliana
ACACGTGT
ACACGTGT		 PBM
Weirauch et al.(2014)
pTH7240 		0.788 0.850
ABF3
M09912_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF3_Q2 		0.788 0.850
ABF4
M01056_2.00 		Arabidopsis thaliana
NNMCACGTGKNN
NNMCACGTGKNN		 PBM
Sullivan et al.(2014)
pTH7315 		0.785 0.633
ABF4
M01057_2.00 		Arabidopsis thaliana
NDMYAVNWNN
NNWNBTRKHN		 PBM
Sullivan et al.(2014)
pTH7551 		0.785 0.633
ABF4
M09911_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF4_Q2 		0.785 0.633
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra011485.1-P bZIP 333 393

Links

Other bZIP family TFs
Other Brassica rapa TFs

211 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10021369.g Linum usitatissimum Lus10021369.g I 0.821
OLONG_000475 Oryza longistaminata OLONG_000475 I 0.819
OGLUM08G18640 Oryza glumaepatula OGLUM08G18640 I 0.819
GSMUA_Achr6G04270_001 Musa acuminata GSMUA_Achr6G04270_001 I 0.819
ONIVA08G19830 Oryza nivara ONIVA08G19830 I 0.819
GRMZM2G157722 Zea mays GRMZM2G157722 I 0.819
Sb06g026410 Sorghum bicolor Sb06g026410 I 0.818
OS08G0471950 Oryza sativa OS08G0471950 D 0.817
OBART08G17810 Oryza barthii OBART08G17810 I 0.816
LjT07K13.110.nd Lotus japonicus LjT07K13.110.nd I 0.815
Eucgr.G01436 Eucalyptus grandis Eucgr.G01436 I 0.815
MDP0000701734 Malus domestica MDP0000701734 I 0.813
Ciclev10001159m.g Citrus clementina Ciclev10001159m.g I 0.812
Gorai.008G024700 Gossypium raimondii Gorai.008G024700 I 0.812
PRUPE_ppa006503mg Prunus persica PRUPE_ppa006503mg I 0.811
Aquca_007_00660 Aquilegia coerulea Aquca_007_00660 I 0.811
GSMUA_Achr5G24570_001 Musa acuminata GSMUA_Achr5G24570_001 I 0.811
Sb08g003760 Sorghum bicolor Sb08g003760 I 0.811
Cucsa.396070 Cucumis sativus Cucsa.396070 I 0.810
Eucgr.F02337 Eucalyptus grandis Eucgr.F02337 I 0.809
Pm005288 Prunus mume Pm005288 I 0.809
GLYMA07G33600 Glycine max GLYMA07G33600 I 0.808
Thhalv10011493m.g Eutrema salsugineum Thhalv10011493m.g I 0.808
LPERR08G14740 Leersia perrieri LPERR08G14740 I 0.806
BGIOSGA028831 Oryza indica BGIOSGA028831 I 0.806
GRMZM2G478417 Zea mays GRMZM2G478417 I 0.806
ORUFI08G19970 Oryza rufipogon ORUFI08G19970 I 0.806
ORGLA08G0211300 Oryza glaberrima ORGLA08G0211300 I 0.806
OPUNC08G15700 Oryza punctata OPUNC08G15700 I 0.806
ABF4 Arabidopsis thaliana AT3G19290 D 0.805
BRADI3G38200 Brachypodium distachyon BRADI3G38200 I 0.805
Cucsa.219780 Cucumis sativus Cucsa.219780 I 0.805
Bo1g007700 Brassica oleracea Bo1g007700 I 0.805
Bo6g006970 Brassica oleracea Bo6g006970 I 0.804
Cagra.10917s0002 Capsella grandiflora Cagra.10917s0002 I 0.804
Carubv10009177m.g Capsella rubella Carubv10009177m.g I 0.804
ABF2 Arabidopsis thaliana AT1G45249 D 0.804
Gorai.005G237400 Gossypium raimondii Gorai.005G237400 I 0.804
Gorai.013G044500 Gossypium raimondii Gorai.013G044500 I 0.804
ABF2 Arabidopsis lyrata fgenesh2_kg.1__3804__AT1G45249.1 I 0.804
BRADI4G32090 Brachypodium distachyon BRADI4G32090 I 0.804
Bra040260 Brassica rapa Bra040260 I 0.804
Ca_06458 Cicer arietinum Ca_06458 I 0.803
PGSC0003DMG400022931 Solanum tuberosum PGSC0003DMG400022931 I 0.803
MTR_4g085910 Medicago truncatula MTR_4g085910 I 0.803
ATBZIP27 Arabidopsis thaliana AT2G17770 I 0.803
Gorai.009G212600 Gossypium raimondii Gorai.009G212600 I 0.802
Ciclev10028435m.g Citrus clementina Ciclev10028435m.g I 0.802
Bo7g116570 Brassica oleracea Bo7g116570 I 0.802
Sb10g007090 Sorghum bicolor Sb10g007090 I 0.802
OB09G19140 Oryza brachyantha OB09G19140 I 0.802
orange1.1g013197m.g Citrus sinensis orange1.1g013197m.g I 0.802
Si013904m.g Setaria italica Si013904m.g I 0.801
Bostr.19424s0732 Boechera stricta Bostr.19424s0732 I 0.801
GSMUA_Achr5G05690_001 Musa acuminata GSMUA_Achr5G05690_001 I 0.800
Si030114m.g Setaria italica Si030114m.g I 0.800
MDP0000296303 Malus domestica MDP0000296303 I 0.800
Lus10027897.g Linum usitatissimum Lus10027897.g I 0.800
Sb07g022965 Sorghum bicolor Sb07g022965 I 0.800
OB08G24950 Oryza brachyantha OB08G24950 I 0.800
SapurV1A.3185s0030 Salix purpurea SapurV1A.3185s0030 I 0.800
SapurV1A.0643s0160 Salix purpurea SapurV1A.0643s0160 I 0.800
29801.m003176 Ricinus communis 29801.m003176 I 0.799
MLOC_66546 Hordeum vulgare MLOC_66546 I 0.799
Carubv10013729m.g Capsella rubella Carubv10013729m.g I 0.799
Solyc04g078840.2 Solanum lycopersicum Solyc04g078840.2 I 0.799
GLYMA13G22061 Glycine max GLYMA13G22061 I 0.799
cassava11518.m1 Manihot esculenta cassava11518.m1 I 0.798
GSMUA_Achr6G30550_001 Musa acuminata GSMUA_Achr6G30550_001 I 0.798
Lus10009755.g Linum usitatissimum Lus10009755.g I 0.798
gene09110-v1.0-hybrid Fragaria vesca gene09110-v1.0-hybrid I 0.797
Lus10017049.g Linum usitatissimum Lus10017049.g I 0.797
mgf002176m Mimulus guttatus mgf002176m I 0.797
SELMODRAFT_177659 Selaginella moellendorffii SELMODRAFT_177659 I 0.796
SapurV1A.0167s0060 Salix purpurea SapurV1A.0167s0060 I 0.796
Bo3g073080 Brassica oleracea Bo3g073080 I 0.796
Bo1g114840 Brassica oleracea Bo1g114840 I 0.796
Pavir.J31353 Panicum virgatum Pavir.J31353 I 0.795
Cla022926 Citrullus lanatus Cla022926 I 0.795
ABF3 Arabidopsis thaliana AT4G34000 D 0.795
GLYMA10G08370 Glycine max GLYMA10G08370 I 0.795
SELMODRAFT_266892 Selaginella moellendorffii SELMODRAFT_266892 I 0.795
MTR_3g101780 Medicago truncatula MTR_3g101780 I 0.795
Pavir.Ba02029 Panicum virgatum Pavir.Ba02029 I 0.794
Thhalv10025203m.g Eutrema salsugineum Thhalv10025203m.g I 0.793
AMTR_s00132p00065700 Amborella trichopoda AMTR_s00132p00065700 I 0.793
PGSC0003DMG400008011 Solanum tuberosum PGSC0003DMG400008011 I 0.793
evm.TU.supercontig_49.26 Carica papaya evm.TU.supercontig_49.26 I 0.793
Aquca_072_00142 Aquilegia coerulea Aquca_072_00142 I 0.793
orange1.1g021624m.g Citrus sinensis orange1.1g021624m.g I 0.793
ABI5 Arabidopsis thaliana AT2G36270 D 0.793
DPBF2 Vitis vinifera VIT_06s0080g00340 I 0.793
TCM_033824 Theobroma cacao TCM_033824 I 0.793
VIT_18s0001g04500 Vitis vinifera VIT_18s0001g04500 I 0.792
MDP0000248567 Malus domestica MDP0000248567 I 0.792
Ca_01548 Cicer arietinum Ca_01548 I 0.792
TCM_007074 Theobroma cacao TCM_007074 I 0.792
PGSC0003DMG400002660 Solanum tuberosum PGSC0003DMG400002660 I 0.792
GLYMA06G04353 Glycine max GLYMA06G04353 I 0.792
GLYMA04G04170 Glycine max GLYMA04G04170 I 0.792
orange1.1g037676m.g Citrus sinensis orange1.1g037676m.g I 0.791
orange1.1g025340m.g Citrus sinensis orange1.1g025340m.g I 0.791
Gorai.002G240500 Gossypium raimondii Gorai.002G240500 I 0.791
TRIUR3_26781 Triticum urartu TRIUR3_26781 I 0.791
Pm026185 Prunus mume Pm026185 I 0.791
SELMODRAFT_443424 Selaginella moellendorffii SELMODRAFT_443424 I 0.791
OPUNC05G18710 Oryza punctata OPUNC05G18710 I 0.791
Bo6g018480 Brassica oleracea Bo6g018480 I 0.791
ABF1 Arabidopsis thaliana AT1G49720 D 0.791
ABF2 Vitis vinifera VIT_18s0001g10450 I 0.790
cassava42669.valid.m1 Manihot esculenta cassava42669.valid.m1 I 0.790
30170.m013868 Ricinus communis 30170.m013868 I 0.790
POPTR_0002s12710 Populus trichocarpa POPTR_0002s12710 I 0.790
cassava12275.valid.m1 Manihot esculenta cassava12275.valid.m1 I 0.790
ABI5 Populus trichocarpa POPTR_0006s08300 I 0.790
SapurV1A.0878s0160 Salix purpurea SapurV1A.0878s0160 I 0.790
SELMODRAFT_94516 Selaginella moellendorffii SELMODRAFT_94516 I 0.790
SELMODRAFT_91900 Selaginella moellendorffii SELMODRAFT_91900 I 0.790
TCM_022574 Theobroma cacao TCM_022574 I 0.790
POPTR_0014s02810 Populus trichocarpa POPTR_0014s02810 I 0.790
PK02169.1 Cannabis sativa PK02169.1 I 0.790
BGIOSGA022536 Oryza indica BGIOSGA022536 I 0.789
Bostr.12302s0127 Boechera stricta Bostr.12302s0127 I 0.789
ONIVA06G08350 Oryza nivara ONIVA06G08350 I 0.789
mgf020824m Mimulus guttatus mgf020824m I 0.789
OPUNC06G06690 Oryza punctata OPUNC06G06690 I 0.789
GLYMA19G37910 Glycine max GLYMA19G37910 I 0.789
PK18009.1 Cannabis sativa PK18009.1 D 0.789
OMERI06G08210 Oryza meridionalis OMERI06G08210 I 0.789
OBART01G37980 Oryza barthii OBART01G37980 I 0.789
OB06G16510 Oryza brachyantha OB06G16510 I 0.789
OBART06G07070 Oryza barthii OBART06G07070 I 0.789
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I 0.789
OGLUM06G07500 Oryza glumaepatula OGLUM06G07500 I 0.789
LPERR06G06440 Leersia perrieri LPERR06G06440 I 0.789
BGIOSGA040605 Oryza indica BGIOSGA040605 I 0.789
ONIVA04G25730 Oryza nivara ONIVA04G25730 I 0.789
chr1.CM0010.310.nd Lotus japonicus chr1.CM0010.310.nd I 0.789
ORGLA06G0066000 Oryza glaberrima ORGLA06G0066000 I 0.789
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I 0.789
TRIUR3_29638 Triticum urartu TRIUR3_29638 I 0.789
Cagra.1305s0026 Capsella grandiflora Cagra.1305s0026 I 0.788
Carubv10006251m.g Capsella rubella Carubv10006251m.g I 0.788
mgf015092m Mimulus guttatus mgf015092m I 0.788
ABF3 Arabidopsis lyrata fgenesh2_kg.7__705__AT4G34000.1 I 0.788
Bostr.7867s1253 Boechera stricta Bostr.7867s1253 I 0.788
mgf002047m Mimulus guttatus mgf002047m I 0.788
mgf007524m Mimulus guttatus mgf007524m I 0.788
mgf014602m Mimulus guttatus mgf014602m I 0.788
Cucsa.385090 Cucumis sativus Cucsa.385090 I 0.787
Ciclev10028635m.g Citrus clementina Ciclev10028635m.g I 0.787
SELMODRAFT_428822 Selaginella moellendorffii SELMODRAFT_428822 I 0.787
VIT_03s0063g00310 Vitis vinifera VIT_03s0063g00310 I 0.787
GRMZM2G002075 Zea mays GRMZM2G002075 I 0.787
Pavir.Fb01750 Panicum virgatum Pavir.Fb01750 I 0.787
SapurV1A.0374s0070 Salix purpurea SapurV1A.0374s0070 I 0.787
Sb03g040510 Sorghum bicolor Sb03g040510 I 0.786
Si001731m.g Setaria italica Si001731m.g I 0.786
Lus10014066.g Linum usitatissimum Lus10014066.g I 0.786
MDP0000740787 Malus domestica MDP0000740787 I 0.786
Traes_4DL_F38ED7FB6 Triticum aestivum Traes_4DL_F38ED7FB6 I 0.785
BGIOSGA030899 Oryza indica BGIOSGA030899 I 0.785
TRIUR3_15490 Triticum urartu TRIUR3_15490 I 0.785
Gorai.009G275700 Gossypium raimondii Gorai.009G275700 I 0.785
ABF4 Arabidopsis lyrata fgenesh2_kg.3__2145__AT3G19290.1 I 0.785
POPTR_0009s16610 Populus trichocarpa POPTR_0009s16610 I 0.785
PRUPE_ppa006752mg Prunus persica PRUPE_ppa006752mg I 0.785
Bra018800 Brassica rapa Bra018800 I 0.785
Traes_4AS_F9C171219 Triticum aestivum Traes_4AS_F9C171219 I 0.785
Traes_4BL_4C9A415F3 Triticum aestivum Traes_4BL_4C9A415F3 I 0.785
Lus10022720.g Linum usitatissimum Lus10022720.g I 0.785
Lus10014194.g Linum usitatissimum Lus10014194.g I 0.785
Cla016272 Citrullus lanatus Cla016272 I 0.785
Cagra.4978s0002 Capsella grandiflora Cagra.4978s0002 I 0.785
OGLUM09G13130 Oryza glumaepatula OGLUM09G13130 I 0.785
Carubv10009399m.g Capsella rubella Carubv10009399m.g I 0.785
30055.m001548 Ricinus communis 30055.m001548 I 0.785
OMERI09G10130 Oryza meridionalis OMERI09G10130 I 0.785
OPUNC09G11090 Oryza punctata OPUNC09G11090 I 0.785
cassava16074.m1 Manihot esculenta cassava16074.m1 I 0.785
29625.m000702 Ricinus communis 29625.m000702 I 0.785
ORGLA09G0097200 Oryza glaberrima ORGLA09G0097200 I 0.785
OS09G0456200 Oryza sativa OS09G0456200 I 0.785
gene28250-v1.0-hybrid Fragaria vesca gene28250-v1.0-hybrid I 0.785
Pm021430 Prunus mume Pm021430 I 0.785
MLOC_61490 Hordeum vulgare MLOC_61490 I 0.785
GLYMA04G14840 Glycine max GLYMA04G14840 I 0.784
cassava17300.m1 Manihot esculenta cassava17300.m1 I 0.784
EEL Arabidopsis thaliana AT2G41070 I 0.784
Thhalv10017050m.g Eutrema salsugineum Thhalv10017050m.g I 0.784
Bostr.9345s0024 Boechera stricta Bostr.9345s0024 I 0.784
OBART02G33770 Oryza barthii OBART02G33770 I 0.784
Bo4g012940 Brassica oleracea Bo4g012940 I 0.784
EEL Arabidopsis lyrata fgenesh2_kg.4__2235__AT2G41070.2 I 0.784
cassava42745.valid.m1 Manihot esculenta cassava42745.valid.m1 I 0.783
cassava42743.valid.m1 Manihot esculenta cassava42743.valid.m1 I 0.783
cassava32856.m1 Manihot esculenta cassava32856.m1 I 0.783
cassava42744.valid.m1 Manihot esculenta cassava42744.valid.m1 I 0.783
Cagra.1642s0072 Capsella grandiflora Cagra.1642s0072 I 0.783
Carubv10023893m.g Capsella rubella Carubv10023893m.g I 0.783
PGSC0003DMG400007208 Solanum tuberosum PGSC0003DMG400007208 I 0.783
Aquca_009_00009 Aquilegia coerulea Aquca_009_00009 I 0.783
Pavir.Fa00674 Panicum virgatum Pavir.Fa00674 I 0.783
Thhalv10020772m.g Eutrema salsugineum Thhalv10020772m.g I 0.782
Bostr.26675s0197 Boechera stricta Bostr.26675s0197 I 0.782
TCM_044596 Theobroma cacao TCM_044596 I 0.782
Solyc11g044560.1 Solanum lycopersicum Solyc11g044560.1 I 0.782
GLYMA06G47220 Glycine max GLYMA06G47220 I 0.782
Bra037533 Brassica rapa Bra037533 I 0.782
Bra022409 Brassica rapa Bra022409 I 0.782
Bo5g115300 Brassica oleracea Bo5g115300 I 0.782