Lus10014066.g (Linum usitatissimum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Lus10014066.g T072037_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK18009.1
M01158_2.00
Cannabis sativa
NNACACGTGN

NCACGTGTNN
PBM
Lambert et al.(2019)
pTH10272
0.822 0.839
ABF4
M01056_2.00
Arabidopsis thaliana
NNMCACGTGKNN

NNMCACGTGKNN
PBM
Sullivan et al.(2014)
pTH7315
0.815 0.726
ABF4
M01057_2.00
Arabidopsis thaliana
NDMYAVNWNN

NNWNBTRKHN
PBM
Sullivan et al.(2014)
pTH7551
0.815 0.726
ABF4
M09911_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF4_Q2
0.815 0.726
OS08G0471950
M10047_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TRAB1_Q2
0.806 0.629
ABF1
M01772_2.00
Arabidopsis thaliana
NNMCACGTGNN

NNCACGTGKNN
PBM
Weirauch et al.(2014)
pTH8837
0.801 0.645
ABF1
M01773_2.00
Arabidopsis thaliana
NMCACGTGKN

NMCACGTGKN
PBM
Weirauch et al.(2014)
pTH8853
0.801 0.645
ABF1
M02656_2.00
Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC

GRHCACGTGGCVVVVVVVV
SELEX
Mathelier et al.(2014)
MA0570.1
0.801 0.645
ABF1
M09906_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_01
0.801 0.645
ABF1
M09907_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_02
0.801 0.645
ABF1
M09908_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_03
0.801 0.645
ABF3
M01782_2.00
Arabidopsis thaliana
ACACGTGT

ACACGTGT
PBM
Weirauch et al.(2014)
pTH7240
0.801 0.597
ABF3
M09912_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF3_Q2
0.801 0.597
ABF2
M01771_2.00
Arabidopsis thaliana
NNYACGTGTHNNN

NNNDACACGTRNN
PBM
Weirauch et al.(2014)
pTH8103
0.800 0.774
ABF2
M06755_2.00
Arabidopsis thaliana
NNWNNTGMCACGTSWBMH

DKVWSACGTGKCANNWNN
Dap-seq
OMalley et al.(2016)
ABF2_col_v3a
0.800 0.774
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10014066 bZIP 341 402

Links

Other bZIP family TFs
Other Linum usitatissimum TFs

216 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
cassava42745.valid.m1 Manihot esculenta cassava42745.valid.m1 I 0.858
cassava42744.valid.m1 Manihot esculenta cassava42744.valid.m1 I 0.858
cassava42743.valid.m1 Manihot esculenta cassava42743.valid.m1 I 0.858
POPTR_0009s10400 Populus trichocarpa POPTR_0009s10400 I 0.857
Cucsa.219780 Cucumis sativus Cucsa.219780 I 0.851
Cla016272 Citrullus lanatus Cla016272 I 0.851
OB08G24950 Oryza brachyantha OB08G24950 I 0.849
PGSC0003DMG400006211 Solanum tuberosum PGSC0003DMG400006211 I 0.844
LPERR08G14740 Leersia perrieri LPERR08G14740 I 0.844
mgf020824m Mimulus guttatus mgf020824m I 0.842
ORUFI08G19970 Oryza rufipogon ORUFI08G19970 I 0.838
OPUNC08G15700 Oryza punctata OPUNC08G15700 I 0.838
ORGLA08G0211300 Oryza glaberrima ORGLA08G0211300 I 0.838
BGIOSGA028831 Oryza indica BGIOSGA028831 I 0.838
PRUPE_ppa006752mg Prunus persica PRUPE_ppa006752mg I 0.836
PGSC0003DMG400025889 Solanum tuberosum PGSC0003DMG400025889 I 0.836
Thhalv10025203m.g Eutrema salsugineum Thhalv10025203m.g I 0.836
Solyc01g108080.2 Solanum lycopersicum Solyc01g108080.2 I 0.836
Pm021430 Prunus mume Pm021430 I 0.836
gene28250-v1.0-hybrid Fragaria vesca gene28250-v1.0-hybrid I 0.836
mgf002047m Mimulus guttatus mgf002047m I 0.834
Bostr.19424s0732 Boechera stricta Bostr.19424s0732 I 0.834
mgf007524m Mimulus guttatus mgf007524m I 0.834
Gorai.013G044500 Gossypium raimondii Gorai.013G044500 I 0.834
TCM_007074 Theobroma cacao TCM_007074 I 0.834
MDP0000248567 Malus domestica MDP0000248567 I 0.834
mgf014602m Mimulus guttatus mgf014602m I 0.834
Solyc10g050210.1 Solanum lycopersicum Solyc10g050210.1 I 0.829
Si030114m.g Setaria italica Si030114m.g I 0.828
OMERI09G10130 Oryza meridionalis OMERI09G10130 I 0.827
OGLUM09G13130 Oryza glumaepatula OGLUM09G13130 I 0.827
OS09G0456200 Oryza sativa OS09G0456200 I 0.827
ORGLA09G0097200 Oryza glaberrima ORGLA09G0097200 I 0.827
OPUNC09G11090 Oryza punctata OPUNC09G11090 I 0.827
Si013904m.g Setaria italica Si013904m.g I 0.827
BGIOSGA030899 Oryza indica BGIOSGA030899 I 0.827
Pavir.Fa00674 Panicum virgatum Pavir.Fa00674 I 0.825
Thhalv10020772m.g Eutrema salsugineum Thhalv10020772m.g I 0.824
Bra022409 Brassica rapa Bra022409 I 0.824
SapurV1A.0643s0160 Salix purpurea SapurV1A.0643s0160 I 0.824
SapurV1A.3185s0030 Salix purpurea SapurV1A.3185s0030 I 0.824
Bra037533 Brassica rapa Bra037533 I 0.824
Bo5g115300 Brassica oleracea Bo5g115300 I 0.824
cassava32856.m1 Manihot esculenta cassava32856.m1 I 0.823
PK18009.1 Cannabis sativa PK18009.1 D 0.822
Sb07g022965 Sorghum bicolor Sb07g022965 I 0.820
Pavir.Ba02029 Panicum virgatum Pavir.Ba02029 I 0.820
LPERR09G09170 Leersia perrieri LPERR09G09170 I 0.820
Carubv10013729m.g Capsella rubella Carubv10013729m.g I 0.819
ABF4 Arabidopsis lyrata fgenesh2_kg.3__2145__AT3G19290.1 I 0.819
Cagra.4978s0002 Capsella grandiflora Cagra.4978s0002 I 0.819
Gorai.005G237400 Gossypium raimondii Gorai.005G237400 I 0.818
Pavir.J35078 Panicum virgatum Pavir.J35078 I 0.817
OS01G0859300 Oryza sativa OS01G0859300 I 0.816
OBART01G37980 Oryza barthii OBART01G37980 I 0.816
OLONG_014546 Oryza longistaminata OLONG_014546 I 0.816
OMERI01G34950 Oryza meridionalis OMERI01G34950 I 0.816
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I 0.816
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I 0.816
ORGLA01G0317900 Oryza glaberrima ORGLA01G0317900 I 0.816
ONIVA04G25730 Oryza nivara ONIVA04G25730 I 0.816
BGIOSGA004837 Oryza indica BGIOSGA004837 I 0.816
OB01G46760 Oryza brachyantha OB01G46760 I 0.816
LPERR01G32620 Leersia perrieri LPERR01G32620 I 0.816
Cagra.2481s0016 Capsella grandiflora Cagra.2481s0016 I 0.816
Bo3g073080 Brassica oleracea Bo3g073080 I 0.816
Lus10027897.g Linum usitatissimum Lus10027897.g I 0.815
GRMZM2G168079 Zea mays GRMZM2G168079 I 0.815
evm.TU.supercontig_62.4 Carica papaya evm.TU.supercontig_62.4 I 0.815
PGSC0003DMG400008011 Solanum tuberosum PGSC0003DMG400008011 I 0.815
ABF4 Arabidopsis thaliana AT3G19290 D 0.815
TRAES3BF111600130CFD_g Triticum aestivum TRAES3BF111600130CFD_g I 0.814
Bo1g114840 Brassica oleracea Bo1g114840 I 0.814
F775_32479 Aegilops tauschii F775_32479 I 0.814
Traes_3AL_FC5523394 Triticum aestivum Traes_3AL_FC5523394 I 0.814
ABF1 Arabidopsis lyrata fgenesh2_kg.1__4055__AT1G49720.1 I 0.814
MLOC_34679 Hordeum vulgare MLOC_34679 I 0.814
MLOC_66546 Hordeum vulgare MLOC_66546 I 0.814
Thhalv10012271m.g Eutrema salsugineum Thhalv10012271m.g I 0.813
PK02169.1 Cannabis sativa PK02169.1 I 0.813
Ciclev10001159m.g Citrus clementina Ciclev10001159m.g I 0.813
GSMUA_Achr9G27130_001 Musa acuminata GSMUA_Achr9G27130_001 I 0.813
orange1.1g025340m.g Citrus sinensis orange1.1g025340m.g I 0.813
Lus10002399.g Linum usitatissimum Lus10002399.g I 0.813
OB09G19140 Oryza brachyantha OB09G19140 I 0.813
Pavir.Fb01750 Panicum virgatum Pavir.Fb01750 I 0.812
Cucsa.241090 Cucumis sativus Cucsa.241090 I 0.812
orange1.1g013197m.g Citrus sinensis orange1.1g013197m.g I 0.812
Ciclev10028435m.g Citrus clementina Ciclev10028435m.g I 0.812
evm.TU.supercontig_49.26 Carica papaya evm.TU.supercontig_49.26 I 0.811
Gorai.008G024700 Gossypium raimondii Gorai.008G024700 I 0.811
TCM_033824 Theobroma cacao TCM_033824 I 0.811
AMTR_s00132p00065700 Amborella trichopoda AMTR_s00132p00065700 I 0.811
orange1.1g021624m.g Citrus sinensis orange1.1g021624m.g I 0.811
30170.m013868 Ricinus communis 30170.m013868 I 0.810
SapurV1A.0878s0160 Salix purpurea SapurV1A.0878s0160 I 0.810
cassava12275.valid.m1 Manihot esculenta cassava12275.valid.m1 I 0.810
Eucgr.F02337 Eucalyptus grandis Eucgr.F02337 I 0.810
cassava42669.valid.m1 Manihot esculenta cassava42669.valid.m1 I 0.810
Solyc11g044560.1 Solanum lycopersicum Solyc11g044560.1 I 0.810
ABF2 Vitis vinifera VIT_18s0001g10450 I 0.810
Eucgr.I01145 Eucalyptus grandis Eucgr.I01145 I 0.810
PGSC0003DMG400022931 Solanum tuberosum PGSC0003DMG400022931 I 0.810
POPTR_0002s12710 Populus trichocarpa POPTR_0002s12710 I 0.810
SapurV1A.0167s0060 Salix purpurea SapurV1A.0167s0060 I 0.810
POPTR_0014s02810 Populus trichocarpa POPTR_0014s02810 I 0.810
ORGLA02G0292000 Oryza glaberrima ORGLA02G0292000 I 0.810
MTR_3g101780 Medicago truncatula MTR_3g101780 I 0.809
GSMUA_Achr5G05690_001 Musa acuminata GSMUA_Achr5G05690_001 I 0.808
Gorai.009G275700 Gossypium raimondii Gorai.009G275700 I 0.808
BRADI3G38200 Brachypodium distachyon BRADI3G38200 I 0.808
GLYMA06G04353 Glycine max GLYMA06G04353 I 0.807
Ca_01548 Cicer arietinum Ca_01548 I 0.807
OGLUM08G18640 Oryza glumaepatula OGLUM08G18640 I 0.807
gene09110-v1.0-hybrid Fragaria vesca gene09110-v1.0-hybrid I 0.807
GLYMA04G04170 Glycine max GLYMA04G04170 I 0.807
GSMUA_Achr6G30550_001 Musa acuminata GSMUA_Achr6G30550_001 I 0.806
Cucsa.385090 Cucumis sativus Cucsa.385090 I 0.806
Sb06g026410 Sorghum bicolor Sb06g026410 I 0.806
OS08G0471950 Oryza sativa OS08G0471950 D 0.806
GRMZM2G478417 Zea mays GRMZM2G478417 I 0.805
OMERI02G32150 Oryza meridionalis OMERI02G32150 I 0.805
ONIVA02G33490 Oryza nivara ONIVA02G33490 I 0.805
BGIOSGA005551 Oryza indica BGIOSGA005551 I 0.805
BZIP23 Oryza sativa OS02G0766700 I 0.805
GRMZM2G157722 Zea mays GRMZM2G157722 I 0.805
OGLUM02G34210 Oryza glumaepatula OGLUM02G34210 I 0.805
ORUFI02G35260 Oryza rufipogon ORUFI02G35260 I 0.805
GSMUA_Achr3G07000_001 Musa acuminata GSMUA_Achr3G07000_001 I 0.805
PRUPE_ppa006503mg Prunus persica PRUPE_ppa006503mg I 0.805
29801.m003176 Ricinus communis 29801.m003176 I 0.804
GRMZM2G002075 Zea mays GRMZM2G002075 I 0.804
ABI5 Populus trichocarpa POPTR_0006s08300 I 0.804
TRIUR3_33995 Triticum urartu TRIUR3_33995 I 0.804
Solyc09g009490.2 Solanum lycopersicum Solyc09g009490.2 I 0.803
Cucsa.396070 Cucumis sativus Cucsa.396070 I 0.803
LjT07K13.110.nd Lotus japonicus LjT07K13.110.nd I 0.803
TRIUR3_31111 Triticum urartu TRIUR3_31111 I 0.802
Bo7g116570 Brassica oleracea Bo7g116570 I 0.802
MLOC_53580 Hordeum vulgare MLOC_53580 N 0.802
Traes_6AL_E8CD2C02B Triticum aestivum Traes_6AL_E8CD2C02B N 0.802
OBART02G33770 Oryza barthii OBART02G33770 I 0.802
Gorai.005G102300 Gossypium raimondii Gorai.005G102300 I 0.801
Cagra.1305s0026 Capsella grandiflora Cagra.1305s0026 I 0.801
GLYMA07G33600 Glycine max GLYMA07G33600 I 0.801
Carubv10006251m.g Capsella rubella Carubv10006251m.g I 0.801
Bostr.7867s1253 Boechera stricta Bostr.7867s1253 I 0.801
ABF1 Arabidopsis thaliana AT1G49720 D 0.801
ABF3 Arabidopsis lyrata fgenesh2_kg.7__705__AT4G34000.1 I 0.801
Cla022926 Citrullus lanatus Cla022926 I 0.801
ABF3 Arabidopsis thaliana AT4G34000 D 0.801
OPUNC01G36800 Oryza punctata OPUNC01G36800 I 0.800
Bra040260 Brassica rapa Bra040260 I 0.800
ABF2 Arabidopsis lyrata fgenesh2_kg.1__3804__AT1G45249.1 I 0.800
ABF2 Arabidopsis thaliana AT1G45249 D 0.800
AMTR_s00114p00031980 Amborella trichopoda AMTR_s00114p00031980 I 0.800
MDP0000296303 Malus domestica MDP0000296303 I 0.800
Solyc04g078840.2 Solanum lycopersicum Solyc04g078840.2 I 0.800
Bo6g006970 Brassica oleracea Bo6g006970 I 0.800
Bo1g007700 Brassica oleracea Bo1g007700 I 0.800
Thhalv10011493m.g Eutrema salsugineum Thhalv10011493m.g I 0.800
TRIUR3_26781 Triticum urartu TRIUR3_26781 I 0.799
Sb08g003760 Sorghum bicolor Sb08g003760 I 0.799
TRAES3BF099600130CFD_g Triticum aestivum TRAES3BF099600130CFD_g I 0.798
TCM_022574 Theobroma cacao TCM_022574 I 0.798
Si017618m.g Setaria italica Si017618m.g I 0.797
Carubv10009177m.g Capsella rubella Carubv10009177m.g I 0.796
GSMUA_Achr3G22710_001 Musa acuminata GSMUA_Achr3G22710_001 I 0.796
Cagra.10917s0002 Capsella grandiflora Cagra.10917s0002 I 0.796
evm.TU.supercontig_5.28 Carica papaya evm.TU.supercontig_5.28 I 0.796
Sb04g034190 Sorghum bicolor Sb04g034190 I 0.795
GLYMA10G08370 Glycine max GLYMA10G08370 I 0.795
Gorai.009G212600 Gossypium raimondii Gorai.009G212600 I 0.795
OB02G40680 Oryza brachyantha OB02G40680 I 0.795
Lus10021369.g Linum usitatissimum Lus10021369.g I 0.795
OLONG_001053 Oryza longistaminata OLONG_001053 I 0.795
GSMUA_Achr8G07740_001 Musa acuminata GSMUA_Achr8G07740_001 I 0.794
TRAES3BF111600160CFD_g Triticum aestivum TRAES3BF111600160CFD_g I 0.794
GSMUA_Achr6G04270_001 Musa acuminata GSMUA_Achr6G04270_001 I 0.794
OLONG_000475 Oryza longistaminata OLONG_000475 I 0.793
ONIVA08G19830 Oryza nivara ONIVA08G19830 I 0.793
Pm005288 Prunus mume Pm005288 I 0.792
mgf002176m Mimulus guttatus mgf002176m I 0.791
29625.m000702 Ricinus communis 29625.m000702 I 0.791
Lus10022720.g Linum usitatissimum Lus10022720.g I 0.790
cassava16074.m1 Manihot esculenta cassava16074.m1 I 0.790
GLYMA13G22061 Glycine max GLYMA13G22061 I 0.790
Eucgr.G01436 Eucalyptus grandis Eucgr.G01436 I 0.790
Lus10014194.g Linum usitatissimum Lus10014194.g I 0.790
MTR_7g104480 Medicago truncatula MTR_7g104480 I 0.790
Lus10009755.g Linum usitatissimum Lus10009755.g I 0.790
Ca_00791 Cicer arietinum Ca_00791 I 0.790
30055.m001548 Ricinus communis 30055.m001548 I 0.789
cassava11518.m1 Manihot esculenta cassava11518.m1 I 0.789
SapurV1A.0374s0070 Salix purpurea SapurV1A.0374s0070 I 0.788
GSMUA_Achr5G24570_001 Musa acuminata GSMUA_Achr5G24570_001 I 0.788
Pavir.J00256 Panicum virgatum Pavir.J00256 I 0.788
ABI5 Arabidopsis thaliana AT2G36270 D 0.788
VIT_03s0063g00310 Vitis vinifera VIT_03s0063g00310 I 0.788
POPTR_0009s16610 Populus trichocarpa POPTR_0009s16610 I 0.788
Sb10g007090 Sorghum bicolor Sb10g007090 I 0.787
Bo6g018480 Brassica oleracea Bo6g018480 I 0.787
LPERR02G27610 Leersia perrieri LPERR02G27610 I 0.787
Bra011485 Brassica rapa Bra011485 I 0.786
OPUNC05G18710 Oryza punctata OPUNC05G18710 I 0.785
Traes_3DL_E21790878 Triticum aestivum Traes_3DL_E21790878 I 0.784
F775_19301 Aegilops tauschii F775_19301 I 0.784
MDP0000701734 Malus domestica MDP0000701734 I 0.784
Pavir.J31353 Panicum virgatum Pavir.J31353 I 0.784
DPBF2 Vitis vinifera VIT_06s0080g00340 I 0.784
GRMZM2G132868 Zea mays GRMZM2G132868 I 0.782
Gorai.002G240500 Gossypium raimondii Gorai.002G240500 I 0.782
Pavir.J06257 Panicum virgatum Pavir.J06257 I 0.782
PGSC0003DMG400002660 Solanum tuberosum PGSC0003DMG400002660 I 0.782
Pavir.J36143 Panicum virgatum Pavir.J36143 I 0.782
Aquca_072_00142 Aquilegia coerulea Aquca_072_00142 I 0.782