Thhalv10012271m.g (Eutrema salsugineum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Thhalv10012271m.g T072661_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ABF1
M01772_2.00 		Arabidopsis thaliana
NNMCACGTGNN
NNCACGTGKNN		 PBM
Weirauch et al.(2014)
pTH8837 		0.853 0.887
ABF1
M01773_2.00 		Arabidopsis thaliana
NMCACGTGKN
NMCACGTGKN		 PBM
Weirauch et al.(2014)
pTH8853 		0.853 0.887
ABF1
M02656_2.00 		Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC
GRHCACGTGGCVVVVVVVV		 SELEX
Mathelier et al.(2014)
MA0570.1 		0.853 0.887
ABF1
M09906_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_01 		0.853 0.887
ABF1
M09907_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_02 		0.853 0.887
ABF1
M09908_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_03 		0.853 0.887
ABF4
M01056_2.00 		Arabidopsis thaliana
NNMCACGTGKNN
NNMCACGTGKNN		 PBM
Sullivan et al.(2014)
pTH7315 		0.834 0.774
ABF4
M01057_2.00 		Arabidopsis thaliana
NDMYAVNWNN
NNWNBTRKHN		 PBM
Sullivan et al.(2014)
pTH7551 		0.834 0.774
ABF4
M09911_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF4_Q2 		0.834 0.774
PK18009.1
M01158_2.00 		Cannabis sativa
NNACACGTGN
NCACGTGTNN		 PBM
Lambert et al.(2019)
pTH10272 		0.832 0.661
ABF3
M01782_2.00 		Arabidopsis thaliana
ACACGTGT
ACACGTGT		 PBM
Weirauch et al.(2014)
pTH7240 		0.806 0.597
ABF3
M09912_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF3_Q2 		0.806 0.597
OS08G0471950
M10047_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TRAB1_Q2 		0.790 0.613
ABF2
M01771_2.00 		Arabidopsis thaliana
NNYACGTGTHNNN
NNNDACACGTRNN		 PBM
Weirauch et al.(2014)
pTH8103 		0.790 0.694
ABF2
M06755_2.00 		Arabidopsis thaliana
NNWNNTGMCACGTSWBMH
DKVWSACGTGKCANNWNN		 Dap-seq
OMalley et al.(2016)
ABF2_col_v3a 		0.790 0.694
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10012271m bZIP 305 366

Links

Other bZIP family TFs
Other Eutrema salsugineum TFs

196 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ABF1 Arabidopsis lyrata fgenesh2_kg.1__4055__AT1G49720.1 I 0.875
Cagra.2481s0016 Capsella grandiflora Cagra.2481s0016 I 0.868
Bra037533 Brassica rapa Bra037533 I 0.855
Bo5g115300 Brassica oleracea Bo5g115300 I 0.855
Bra022409 Brassica rapa Bra022409 I 0.855
Thhalv10020772m.g Eutrema salsugineum Thhalv10020772m.g I 0.855
ABF1 Arabidopsis thaliana AT1G49720 D 0.853
Bostr.19424s0732 Boechera stricta Bostr.19424s0732 I 0.848
ABF4 Arabidopsis lyrata fgenesh2_kg.3__2145__AT3G19290.1 I 0.845
Cagra.4978s0002 Capsella grandiflora Cagra.4978s0002 I 0.845
Carubv10013729m.g Capsella rubella Carubv10013729m.g I 0.845
SapurV1A.0643s0160 Salix purpurea SapurV1A.0643s0160 I 0.838
PGSC0003DMG400006211 Solanum tuberosum PGSC0003DMG400006211 I 0.838
SapurV1A.3185s0030 Salix purpurea SapurV1A.3185s0030 I 0.838
ABF4 Arabidopsis thaliana AT3G19290 D 0.834
Si030114m.g Setaria italica Si030114m.g I 0.834
PK18009.1 Cannabis sativa PK18009.1 D 0.832
Solyc01g108080.2 Solanum lycopersicum Solyc01g108080.2 I 0.830
PGSC0003DMG400025889 Solanum tuberosum PGSC0003DMG400025889 I 0.830
evm.TU.supercontig_62.4 Carica papaya evm.TU.supercontig_62.4 I 0.829
mgf002047m Mimulus guttatus mgf002047m I 0.827
TCM_007074 Theobroma cacao TCM_007074 I 0.827
mgf007524m Mimulus guttatus mgf007524m I 0.827
Gorai.013G044500 Gossypium raimondii Gorai.013G044500 I 0.827
MDP0000248567 Malus domestica MDP0000248567 I 0.827
mgf014602m Mimulus guttatus mgf014602m I 0.827
Solyc10g050210.1 Solanum lycopersicum Solyc10g050210.1 I 0.826
gene28250-v1.0-hybrid Fragaria vesca gene28250-v1.0-hybrid I 0.825
GSMUA_Achr3G22710_001 Musa acuminata GSMUA_Achr3G22710_001 I 0.824
Lus10002399.g Linum usitatissimum Lus10002399.g I 0.824
PGSC0003DMG400022931 Solanum tuberosum PGSC0003DMG400022931 I 0.823
Solyc11g044560.1 Solanum lycopersicum Solyc11g044560.1 I 0.823
Pm021430 Prunus mume Pm021430 I 0.823
PRUPE_ppa006752mg Prunus persica PRUPE_ppa006752mg I 0.823
GSMUA_Achr8G07740_001 Musa acuminata GSMUA_Achr8G07740_001 I 0.821
Pavir.Fa00674 Panicum virgatum Pavir.Fa00674 I 0.818
Cla016272 Citrullus lanatus Cla016272 I 0.818
Cucsa.219780 Cucumis sativus Cucsa.219780 I 0.818
AMTR_s00114p00031980 Amborella trichopoda AMTR_s00114p00031980 I 0.817
Si013904m.g Setaria italica Si013904m.g I 0.817
OPUNC09G11090 Oryza punctata OPUNC09G11090 I 0.816
LPERR09G09170 Leersia perrieri LPERR09G09170 I 0.816
OGLUM09G13130 Oryza glumaepatula OGLUM09G13130 I 0.816
ORGLA09G0097200 Oryza glaberrima ORGLA09G0097200 I 0.816
OS09G0456200 Oryza sativa OS09G0456200 I 0.816
BGIOSGA030899 Oryza indica BGIOSGA030899 I 0.816
OMERI09G10130 Oryza meridionalis OMERI09G10130 I 0.816
POPTR_0009s10400 Populus trichocarpa POPTR_0009s10400 I 0.815
TCM_033824 Theobroma cacao TCM_033824 I 0.814
Thhalv10025203m.g Eutrema salsugineum Thhalv10025203m.g I 0.814
Lus10014066.g Linum usitatissimum Lus10014066.g I 0.813
Bo3g073080 Brassica oleracea Bo3g073080 I 0.813
Gorai.005G237400 Gossypium raimondii Gorai.005G237400 I 0.812
cassava42745.valid.m1 Manihot esculenta cassava42745.valid.m1 I 0.811
cassava42744.valid.m1 Manihot esculenta cassava42744.valid.m1 I 0.811
cassava42743.valid.m1 Manihot esculenta cassava42743.valid.m1 I 0.811
Sb07g022965 Sorghum bicolor Sb07g022965 I 0.810
PGSC0003DMG400008011 Solanum tuberosum PGSC0003DMG400008011 I 0.810
POPTR_0002s12710 Populus trichocarpa POPTR_0002s12710 I 0.809
SapurV1A.0878s0160 Salix purpurea SapurV1A.0878s0160 I 0.809
gene09110-v1.0-hybrid Fragaria vesca gene09110-v1.0-hybrid I 0.809
SapurV1A.0167s0060 Salix purpurea SapurV1A.0167s0060 I 0.809
Eucgr.F02337 Eucalyptus grandis Eucgr.F02337 I 0.809
cassava42669.valid.m1 Manihot esculenta cassava42669.valid.m1 I 0.809
30170.m013868 Ricinus communis 30170.m013868 I 0.809
cassava12275.valid.m1 Manihot esculenta cassava12275.valid.m1 I 0.809
POPTR_0014s02810 Populus trichocarpa POPTR_0014s02810 I 0.809
TRAES3BF111600160CFD_g Triticum aestivum TRAES3BF111600160CFD_g I 0.809
GSMUA_Achr9G27130_001 Musa acuminata GSMUA_Achr9G27130_001 I 0.809
PK02169.1 Cannabis sativa PK02169.1 I 0.808
OS01G0859300 Oryza sativa OS01G0859300 I 0.807
GRMZM2G168079 Zea mays GRMZM2G168079 I 0.807
OMERI01G34950 Oryza meridionalis OMERI01G34950 I 0.807
Pavir.J35078 Panicum virgatum Pavir.J35078 I 0.807
OLONG_014546 Oryza longistaminata OLONG_014546 I 0.807
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I 0.807
OBART01G37980 Oryza barthii OBART01G37980 I 0.807
ORGLA01G0317900 Oryza glaberrima ORGLA01G0317900 I 0.807
Pavir.Ba02029 Panicum virgatum Pavir.Ba02029 I 0.807
BGIOSGA004837 Oryza indica BGIOSGA004837 I 0.807
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I 0.807
OB01G46760 Oryza brachyantha OB01G46760 I 0.807
LPERR01G32620 Leersia perrieri LPERR01G32620 I 0.807
ONIVA04G25730 Oryza nivara ONIVA04G25730 I 0.807
GLYMA06G04353 Glycine max GLYMA06G04353 I 0.806
GLYMA04G04170 Glycine max GLYMA04G04170 I 0.806
Ciclev10001159m.g Citrus clementina Ciclev10001159m.g I 0.806
Ca_01548 Cicer arietinum Ca_01548 I 0.806
29801.m003176 Ricinus communis 29801.m003176 I 0.806
ABF3 Arabidopsis thaliana AT4G34000 D 0.806
Bostr.7867s1253 Boechera stricta Bostr.7867s1253 I 0.806
Cagra.1305s0026 Capsella grandiflora Cagra.1305s0026 I 0.806
ABF2 Vitis vinifera VIT_18s0001g10450 I 0.806
ABF3 Arabidopsis lyrata fgenesh2_kg.7__705__AT4G34000.1 I 0.806
Carubv10006251m.g Capsella rubella Carubv10006251m.g I 0.806
evm.TU.supercontig_49.26 Carica papaya evm.TU.supercontig_49.26 I 0.806
orange1.1g025340m.g Citrus sinensis orange1.1g025340m.g I 0.806
orange1.1g021624m.g Citrus sinensis orange1.1g021624m.g I 0.806
AMTR_s00132p00065700 Amborella trichopoda AMTR_s00132p00065700 I 0.806
TRAES3BF099600130CFD_g Triticum aestivum TRAES3BF099600130CFD_g I 0.805
MLOC_34679 Hordeum vulgare MLOC_34679 I 0.805
orange1.1g013197m.g Citrus sinensis orange1.1g013197m.g I 0.805
Traes_3AL_FC5523394 Triticum aestivum Traes_3AL_FC5523394 I 0.805
TRAES3BF111600130CFD_g Triticum aestivum TRAES3BF111600130CFD_g I 0.805
Ciclev10028435m.g Citrus clementina Ciclev10028435m.g I 0.805
F775_32479 Aegilops tauschii F775_32479 I 0.805
Gorai.009G275700 Gossypium raimondii Gorai.009G275700 I 0.804
VIT_03s0063g00310 Vitis vinifera VIT_03s0063g00310 I 0.804
Bo6g018480 Brassica oleracea Bo6g018480 I 0.804
Lus10022720.g Linum usitatissimum Lus10022720.g I 0.804
Lus10014194.g Linum usitatissimum Lus10014194.g I 0.804
Bra018800 Brassica rapa Bra018800 I 0.804
MTR_3g101780 Medicago truncatula MTR_3g101780 I 0.804
mgf020824m Mimulus guttatus mgf020824m I 0.803
OPUNC01G36800 Oryza punctata OPUNC01G36800 I 0.803
Gorai.008G024700 Gossypium raimondii Gorai.008G024700 I 0.803
29625.m000702 Ricinus communis 29625.m000702 I 0.803
Bo1g007700 Brassica oleracea Bo1g007700 I 0.803
LPERR02G27610 Leersia perrieri LPERR02G27610 I 0.802
OB08G24950 Oryza brachyantha OB08G24950 I 0.802
GSMUA_Achr3G07000_001 Musa acuminata GSMUA_Achr3G07000_001 I 0.801
Gorai.005G102300 Gossypium raimondii Gorai.005G102300 I 0.800
ORGLA02G0292000 Oryza glaberrima ORGLA02G0292000 I 0.800
Pavir.Fb01750 Panicum virgatum Pavir.Fb01750 I 0.800
Lus10027897.g Linum usitatissimum Lus10027897.g I 0.800
MDP0000296303 Malus domestica MDP0000296303 I 0.800
Bo7g116570 Brassica oleracea Bo7g116570 I 0.800
TRIUR3_33995 Triticum urartu TRIUR3_33995 I 0.799
Carubv10009399m.g Capsella rubella Carubv10009399m.g I 0.799
GSMUA_Achr6G30550_001 Musa acuminata GSMUA_Achr6G30550_001 I 0.799
MLOC_66546 Hordeum vulgare MLOC_66546 I 0.798
GRMZM2G002075 Zea mays GRMZM2G002075 I 0.798
Si017618m.g Setaria italica Si017618m.g I 0.798
LPERR08G14740 Leersia perrieri LPERR08G14740 I 0.797
OB09G19140 Oryza brachyantha OB09G19140 I 0.797
ORUFI02G35260 Oryza rufipogon ORUFI02G35260 I 0.796
BZIP23 Oryza sativa OS02G0766700 I 0.796
OGLUM02G34210 Oryza glumaepatula OGLUM02G34210 I 0.796
OMERI02G32150 Oryza meridionalis OMERI02G32150 I 0.796
BGIOSGA005551 Oryza indica BGIOSGA005551 I 0.796
ONIVA02G33490 Oryza nivara ONIVA02G33490 I 0.796
Cla022926 Citrullus lanatus Cla022926 I 0.795
cassava32856.m1 Manihot esculenta cassava32856.m1 I 0.795
Cucsa.396070 Cucumis sativus Cucsa.396070 I 0.795
TRIUR3_26781 Triticum urartu TRIUR3_26781 I 0.795
GRMZM2G157722 Zea mays GRMZM2G157722 I 0.795
Solyc04g078840.2 Solanum lycopersicum Solyc04g078840.2 I 0.795
Bostr.26675s0197 Boechera stricta Bostr.26675s0197 I 0.795
GRMZM2G478417 Zea mays GRMZM2G478417 I 0.795
Eucgr.I01145 Eucalyptus grandis Eucgr.I01145 I 0.794
OLONG_001053 Oryza longistaminata OLONG_001053 I 0.794
Pavir.J00256 Panicum virgatum Pavir.J00256 I 0.793
Sb04g034190 Sorghum bicolor Sb04g034190 I 0.793
BRADI3G38200 Brachypodium distachyon BRADI3G38200 I 0.793
TRIUR3_31111 Triticum urartu TRIUR3_31111 I 0.793
Cucsa.241090 Cucumis sativus Cucsa.241090 I 0.792
GSMUA_Achr5G24570_001 Musa acuminata GSMUA_Achr5G24570_001 I 0.792
Pm001315 Prunus mume Pm001315 I 0.792
OGLUM08G18640 Oryza glumaepatula OGLUM08G18640 I 0.791
GSMUA_Achr5G05690_001 Musa acuminata GSMUA_Achr5G05690_001 I 0.791
Bo1g114840 Brassica oleracea Bo1g114840 I 0.791
OS08G0471950 Oryza sativa OS08G0471950 D 0.790
ORGLA08G0211300 Oryza glaberrima ORGLA08G0211300 I 0.790
Bo6g006970 Brassica oleracea Bo6g006970 I 0.790
Bra040260 Brassica rapa Bra040260 I 0.790
ABF2 Arabidopsis lyrata fgenesh2_kg.1__3804__AT1G45249.1 I 0.790
ORUFI08G19970 Oryza rufipogon ORUFI08G19970 I 0.790
Thhalv10011493m.g Eutrema salsugineum Thhalv10011493m.g I 0.790
OPUNC08G15700 Oryza punctata OPUNC08G15700 I 0.790
ABF2 Arabidopsis thaliana AT1G45249 D 0.790
BGIOSGA028831 Oryza indica BGIOSGA028831 I 0.790
PRUPE_ppa006503mg Prunus persica PRUPE_ppa006503mg I 0.789
Gorai.009G212600 Gossypium raimondii Gorai.009G212600 I 0.789
LjT07K13.110.nd Lotus japonicus LjT07K13.110.nd I 0.788
TCM_034992 Theobroma cacao TCM_034992 I 0.788
Sb06g026410 Sorghum bicolor Sb06g026410 I 0.788
GSMUA_Achr9G08900_001 Musa acuminata GSMUA_Achr9G08900_001 N 0.787
MTR_7g104480 Medicago truncatula MTR_7g104480 I 0.786
Carubv10009177m.g Capsella rubella Carubv10009177m.g I 0.786
Cagra.10917s0002 Capsella grandiflora Cagra.10917s0002 I 0.786
GLYMA13G22061 Glycine max GLYMA13G22061 I 0.785
Lus10021369.g Linum usitatissimum Lus10021369.g I 0.785
ABI5 Arabidopsis thaliana AT2G36270 D 0.784
Ca_00791 Cicer arietinum Ca_00791 I 0.784
GSMUA_Achr2G20490_001 Musa acuminata GSMUA_Achr2G20490_001 I 0.784
Cucsa.385090 Cucumis sativus Cucsa.385090 I 0.784
cassava11518.m1 Manihot esculenta cassava11518.m1 I 0.784
Lus10009755.g Linum usitatissimum Lus10009755.g I 0.783
OBART02G33770 Oryza barthii OBART02G33770 I 0.783
Solyc09g009490.2 Solanum lycopersicum Solyc09g009490.2 I 0.783
Lus10017049.g Linum usitatissimum Lus10017049.g I 0.782
Sb08g003760 Sorghum bicolor Sb08g003760 I 0.782
GRMZM2G033413 Zea mays GRMZM2G033413 I 0.782
cassava17300.m1 Manihot esculenta cassava17300.m1 I 0.782
Pavir.Da01931 Panicum virgatum Pavir.Da01931 I 0.782
Si006889m.g Setaria italica Si006889m.g I 0.782