Gorai.008G024700 (Gossypium raimondii)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Gorai.008G024700 T071944_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK18009.1
M01158_2.00
Cannabis sativa
NNACACGTGN

NCACGTGTNN
PBM
Lambert et al.(2019)
pTH10272
0.824 0.845
ABF2
M01771_2.00
Arabidopsis thaliana
NNYACGTGTHNNN

NNNDACACGTRNN
PBM
Weirauch et al.(2014)
pTH8103
0.819 0.783
ABF3
M01782_2.00
Arabidopsis thaliana
ACACGTGT

ACACGTGT
PBM
Weirauch et al.(2014)
pTH7240
0.814 0.690
ABF2
M06755_2.00
Arabidopsis thaliana
NNWNNTGMCACGTSWBMH

DKVWSACGTGKCANNWNN
Dap-seq
OMalley et al.(2016)
ABF2_col_v3a
0.819 0.783
ABF3
M09912_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF3_Q2
0.814 0.690
OS08G0471950
M10047_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TRAB1_Q2
0.799 0.717
ABF1
M01772_2.00
Arabidopsis thaliana
NNMCACGTGNN

NNCACGTGKNN
PBM
Weirauch et al.(2014)
pTH8837
0.803 0.796
ABF1
M01773_2.00
Arabidopsis thaliana
NMCACGTGKN

NMCACGTGKN
PBM
Weirauch et al.(2014)
pTH8853
0.803 0.796
ABF4
M01056_2.00
Arabidopsis thaliana
NNMCACGTGKNN

NNMCACGTGKNN
PBM
Sullivan et al.(2014)
pTH7315
0.812 0.810
ABF1
M02656_2.00
Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC

GRHCACGTGGCVVVVVVVV
SELEX
Mathelier et al.(2014)
MA0570.1
0.803 0.796
ABF4
M01057_2.00
Arabidopsis thaliana
NDMYAVNWNN

NNWNBTRKHN
PBM
Sullivan et al.(2014)
pTH7551
0.812 0.810
ABF1
M09906_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_01
0.803 0.796
ABF4
M09911_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF4_Q2
0.812 0.810
ABF1
M09907_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_02
0.803 0.796
ABF1
M09908_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_03
0.803 0.796
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.008G024700.1 bZIP 345 406
Gorai.008G024700.2 bZIP 345 406
Gorai.008G024700.3 bZIP 345 393
Gorai.008G024700.4 bZIP 345 402

Links

Other bZIP family TFs
Other Gossypium raimondii TFs

218 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Ca_06458 Cicer arietinum Ca_06458 I 0.843
MTR_4g085910 Medicago truncatula MTR_4g085910 I 0.843
Pavir.Fb01750 Panicum virgatum Pavir.Fb01750 I 0.839
Bo3g073080 Brassica oleracea Bo3g073080 I 0.838
Pavir.Ba02029 Panicum virgatum Pavir.Ba02029 I 0.837
Gorai.005G237400 Gossypium raimondii Gorai.005G237400 I 0.834
Bo1g114840 Brassica oleracea Bo1g114840 I 0.832
GSMUA_Achr9G27130_001 Musa acuminata GSMUA_Achr9G27130_001 I 0.829
BRADI3G38200 Brachypodium distachyon BRADI3G38200 I 0.827
GLYMA07G33600 Glycine max GLYMA07G33600 I 0.826
Solyc11g044560.1 Solanum lycopersicum Solyc11g044560.1 I 0.826
PGSC0003DMG400022931 Solanum tuberosum PGSC0003DMG400022931 I 0.826
Cla022926 Citrullus lanatus Cla022926 I 0.825
Cucsa.396070 Cucumis sativus Cucsa.396070 I 0.825
LPERR09G09170 Leersia perrieri LPERR09G09170 I 0.825
Eucgr.G01436 Eucalyptus grandis Eucgr.G01436 I 0.824
Pavir.Fa00674 Panicum virgatum Pavir.Fa00674 I 0.824
PK18009.1 Cannabis sativa PK18009.1 D 0.824
Bo6g018480 Brassica oleracea Bo6g018480 I 0.824
OPUNC09G11090 Oryza punctata OPUNC09G11090 I 0.823
OS09G0456200 Oryza sativa OS09G0456200 I 0.823
Si013904m.g Setaria italica Si013904m.g I 0.823
OGLUM09G13130 Oryza glumaepatula OGLUM09G13130 I 0.823
BGIOSGA030899 Oryza indica BGIOSGA030899 I 0.823
OMERI09G10130 Oryza meridionalis OMERI09G10130 I 0.823
ORGLA09G0097200 Oryza glaberrima ORGLA09G0097200 I 0.823
mgf002047m Mimulus guttatus mgf002047m I 0.822
mgf007524m Mimulus guttatus mgf007524m I 0.822
GSMUA_Achr6G30550_001 Musa acuminata GSMUA_Achr6G30550_001 I 0.822
Gorai.013G044500 Gossypium raimondii Gorai.013G044500 I 0.822
TCM_007074 Theobroma cacao TCM_007074 I 0.822
mgf014602m Mimulus guttatus mgf014602m I 0.822
MDP0000248567 Malus domestica MDP0000248567 I 0.822
orange1.1g013197m.g Citrus sinensis orange1.1g013197m.g I 0.821
POPTR_0009s10400 Populus trichocarpa POPTR_0009s10400 I 0.821
Si030114m.g Setaria italica Si030114m.g I 0.821
Ciclev10028435m.g Citrus clementina Ciclev10028435m.g I 0.821
Pm005288 Prunus mume Pm005288 I 0.821
cassava42745.valid.m1 Manihot esculenta cassava42745.valid.m1 I 0.821
SapurV1A.3185s0030 Salix purpurea SapurV1A.3185s0030 I 0.821
SapurV1A.0643s0160 Salix purpurea SapurV1A.0643s0160 I 0.821
cassava42743.valid.m1 Manihot esculenta cassava42743.valid.m1 I 0.821
cassava42744.valid.m1 Manihot esculenta cassava42744.valid.m1 I 0.821
GSMUA_Achr6G04270_001 Musa acuminata GSMUA_Achr6G04270_001 I 0.820
Carubv10009177m.g Capsella rubella Carubv10009177m.g I 0.819
29801.m003176 Ricinus communis 29801.m003176 I 0.819
Cagra.10917s0002 Capsella grandiflora Cagra.10917s0002 I 0.819
Bo6g006970 Brassica oleracea Bo6g006970 I 0.819
Thhalv10011493m.g Eutrema salsugineum Thhalv10011493m.g I 0.819
PRUPE_ppa006752mg Prunus persica PRUPE_ppa006752mg I 0.819
ABF2 Arabidopsis lyrata fgenesh2_kg.1__3804__AT1G45249.1 I 0.819
ABF2 Arabidopsis thaliana AT1G45249 D 0.819
gene28250-v1.0-hybrid Fragaria vesca gene28250-v1.0-hybrid I 0.819
Bra040260 Brassica rapa Bra040260 I 0.819
Pm021430 Prunus mume Pm021430 I 0.819
ABI5 Arabidopsis thaliana AT2G36270 D 0.818
OBART02G33770 Oryza barthii OBART02G33770 I 0.817
Solyc01g108080.2 Solanum lycopersicum Solyc01g108080.2 I 0.817
PGSC0003DMG400025889 Solanum tuberosum PGSC0003DMG400025889 I 0.817
PGSC0003DMG400006211 Solanum tuberosum PGSC0003DMG400006211 I 0.817
BRADI4G32090 Brachypodium distachyon BRADI4G32090 I 0.816
Carubv10009399m.g Capsella rubella Carubv10009399m.g I 0.816
OB08G24950 Oryza brachyantha OB08G24950 I 0.815
orange1.1g021624m.g Citrus sinensis orange1.1g021624m.g I 0.815
PGSC0003DMG400008011 Solanum tuberosum PGSC0003DMG400008011 I 0.815
PK02169.1 Cannabis sativa PK02169.1 I 0.815
evm.TU.supercontig_62.4 Carica papaya evm.TU.supercontig_62.4 I 0.815
OB09G19140 Oryza brachyantha OB09G19140 I 0.815
evm.TU.supercontig_49.26 Carica papaya evm.TU.supercontig_49.26 I 0.815
AMTR_s00132p00065700 Amborella trichopoda AMTR_s00132p00065700 I 0.815
Ciclev10001159m.g Citrus clementina Ciclev10001159m.g I 0.814
Thhalv10020772m.g Eutrema salsugineum Thhalv10020772m.g I 0.814
Bo5g115300 Brassica oleracea Bo5g115300 I 0.814
Carubv10006251m.g Capsella rubella Carubv10006251m.g I 0.814
Lus10027897.g Linum usitatissimum Lus10027897.g I 0.814
orange1.1g025340m.g Citrus sinensis orange1.1g025340m.g I 0.814
ABF3 Arabidopsis lyrata fgenesh2_kg.7__705__AT4G34000.1 I 0.814
Cagra.1305s0026 Capsella grandiflora Cagra.1305s0026 I 0.814
ABF3 Arabidopsis thaliana AT4G34000 D 0.814
MLOC_66546 Hordeum vulgare MLOC_66546 I 0.814
Bra022409 Brassica rapa Bra022409 I 0.814
Bra037533 Brassica rapa Bra037533 I 0.814
MDP0000701734 Malus domestica MDP0000701734 I 0.814
Bostr.7867s1253 Boechera stricta Bostr.7867s1253 I 0.814
cassava12275.valid.m1 Manihot esculenta cassava12275.valid.m1 I 0.813
cassava42669.valid.m1 Manihot esculenta cassava42669.valid.m1 I 0.813
POPTR_0014s02810 Populus trichocarpa POPTR_0014s02810 I 0.813
POPTR_0002s12710 Populus trichocarpa POPTR_0002s12710 I 0.813
30170.m013868 Ricinus communis 30170.m013868 I 0.813
SapurV1A.0167s0060 Salix purpurea SapurV1A.0167s0060 I 0.813
SapurV1A.0878s0160 Salix purpurea SapurV1A.0878s0160 I 0.813
Eucgr.F02337 Eucalyptus grandis Eucgr.F02337 I 0.813
MTR_3g101780 Medicago truncatula MTR_3g101780 I 0.813
TCM_022574 Theobroma cacao TCM_022574 I 0.813
Cucsa.219780 Cucumis sativus Cucsa.219780 I 0.812
mgf020824m Mimulus guttatus mgf020824m I 0.812
TRIUR3_26781 Triticum urartu TRIUR3_26781 I 0.812
Cla016272 Citrullus lanatus Cla016272 I 0.812
Lus10002399.g Linum usitatissimum Lus10002399.g I 0.812
Bra011485 Brassica rapa Bra011485 I 0.812
ABF4 Arabidopsis thaliana AT3G19290 D 0.812
VIT_03s0063g00310 Vitis vinifera VIT_03s0063g00310 I 0.812
GLYMA06G04353 Glycine max GLYMA06G04353 I 0.811
GLYMA04G04170 Glycine max GLYMA04G04170 I 0.811
Ca_01548 Cicer arietinum Ca_01548 I 0.811
Sb07g022965 Sorghum bicolor Sb07g022965 I 0.811
Lus10014066.g Linum usitatissimum Lus10014066.g I 0.811
TCM_033824 Theobroma cacao TCM_033824 I 0.811
ABF2 Vitis vinifera VIT_18s0001g10450 I 0.811
GSMUA_Achr5G05690_001 Musa acuminata GSMUA_Achr5G05690_001 I 0.810
GSMUA_Achr5G24570_001 Musa acuminata GSMUA_Achr5G24570_001 I 0.810
Bostr.19424s0732 Boechera stricta Bostr.19424s0732 I 0.809
Bo7g116570 Brassica oleracea Bo7g116570 I 0.808
Thhalv10025203m.g Eutrema salsugineum Thhalv10025203m.g I 0.807
OLONG_000475 Oryza longistaminata OLONG_000475 I 0.806
GRMZM2G157722 Zea mays GRMZM2G157722 I 0.806
GSMUA_Achr3G07000_001 Musa acuminata GSMUA_Achr3G07000_001 I 0.806
ONIVA08G19830 Oryza nivara ONIVA08G19830 I 0.806
Solyc04g078840.2 Solanum lycopersicum Solyc04g078840.2 I 0.805
GRMZM2G478417 Zea mays GRMZM2G478417 I 0.805
LPERR08G14740 Leersia perrieri LPERR08G14740 I 0.805
BGIOSGA028831 Oryza indica BGIOSGA028831 I 0.805
OPUNC08G15700 Oryza punctata OPUNC08G15700 I 0.805
ORUFI08G19970 Oryza rufipogon ORUFI08G19970 I 0.805
ABF1 Arabidopsis thaliana AT1G49720 D 0.805
ORGLA08G0211300 Oryza glaberrima ORGLA08G0211300 I 0.805
Bostr.26675s0197 Boechera stricta Bostr.26675s0197 I 0.805
gene09110-v1.0-hybrid Fragaria vesca gene09110-v1.0-hybrid I 0.804
Carubv10013729m.g Capsella rubella Carubv10013729m.g I 0.804
Bostr.12302s0127 Boechera stricta Bostr.12302s0127 I 0.804
Cagra.4978s0002 Capsella grandiflora Cagra.4978s0002 I 0.804
Gorai.005G102300 Gossypium raimondii Gorai.005G102300 I 0.804
SELMODRAFT_443424 Selaginella moellendorffii SELMODRAFT_443424 I 0.804
ABF4 Arabidopsis lyrata fgenesh2_kg.3__2145__AT3G19290.1 I 0.804
SapurV1A.0374s0070 Salix purpurea SapurV1A.0374s0070 I 0.803
GRMZM2G002075 Zea mays GRMZM2G002075 I 0.803
OBART08G17810 Oryza barthii OBART08G17810 I 0.803
Thhalv10012271m.g Eutrema salsugineum Thhalv10012271m.g I 0.803
ABF1 Arabidopsis lyrata fgenesh2_kg.1__4055__AT1G49720.1 I 0.803
LjT07K13.110.nd Lotus japonicus LjT07K13.110.nd I 0.803
POPTR_0009s16610 Populus trichocarpa POPTR_0009s16610 I 0.803
Solyc10g050210.1 Solanum lycopersicum Solyc10g050210.1 I 0.802
cassava16074.m1 Manihot esculenta cassava16074.m1 I 0.802
ONIVA06G08350 Oryza nivara ONIVA06G08350 I 0.801
ONIVA02G33490 Oryza nivara ONIVA02G33490 I 0.801
OMERI06G08210 Oryza meridionalis OMERI06G08210 I 0.801
OPUNC06G06690 Oryza punctata OPUNC06G06690 I 0.801
ORGLA02G0292000 Oryza glaberrima ORGLA02G0292000 I 0.801
OMERI02G32150 Oryza meridionalis OMERI02G32150 I 0.801
ORUFI02G35260 Oryza rufipogon ORUFI02G35260 I 0.801
BZIP23 Oryza sativa OS02G0766700 I 0.801
ORGLA06G0066000 Oryza glaberrima ORGLA06G0066000 I 0.801
OB06G16510 Oryza brachyantha OB06G16510 I 0.801
BGIOSGA040605 Oryza indica BGIOSGA040605 I 0.801
BGIOSGA022536 Oryza indica BGIOSGA022536 I 0.801
BGIOSGA005551 Oryza indica BGIOSGA005551 I 0.801
Bo1g007700 Brassica oleracea Bo1g007700 I 0.801
LPERR06G06440 Leersia perrieri LPERR06G06440 I 0.801
OGLUM02G34210 Oryza glumaepatula OGLUM02G34210 I 0.801
OBART06G07070 Oryza barthii OBART06G07070 I 0.801
OS08G0471950 Oryza sativa OS08G0471950 D 0.801
OGLUM06G07500 Oryza glumaepatula OGLUM06G07500 I 0.801
Eucgr.I01145 Eucalyptus grandis Eucgr.I01145 I 0.801
30055.m001548 Ricinus communis 30055.m001548 I 0.801
Pavir.J00256 Panicum virgatum Pavir.J00256 I 0.800
OGLUM08G18640 Oryza glumaepatula OGLUM08G18640 I 0.800
Cla017970 Citrullus lanatus Cla017970 I 0.800
Sb06g026410 Sorghum bicolor Sb06g026410 I 0.800
Cagra.2481s0016 Capsella grandiflora Cagra.2481s0016 I 0.800
PRUPE_ppa006503mg Prunus persica PRUPE_ppa006503mg I 0.800
Bra018800 Brassica rapa Bra018800 I 0.800
Gorai.009G275700 Gossypium raimondii Gorai.009G275700 I 0.799
Sb03g040510 Sorghum bicolor Sb03g040510 I 0.799
mgf015092m Mimulus guttatus mgf015092m I 0.799
MDP0000296303 Malus domestica MDP0000296303 I 0.799
Aquca_007_00660 Aquilegia coerulea Aquca_007_00660 I 0.799
Si017618m.g Setaria italica Si017618m.g I 0.798
Sb04g034190 Sorghum bicolor Sb04g034190 I 0.797
TRIUR3_29638 Triticum urartu TRIUR3_29638 I 0.796
Si006889m.g Setaria italica Si006889m.g I 0.795
Gorai.009G212600 Gossypium raimondii Gorai.009G212600 I 0.795
AMTR_s00114p00031980 Amborella trichopoda AMTR_s00114p00031980 I 0.795
Pavir.Da01931 Panicum virgatum Pavir.Da01931 I 0.795
Si001731m.g Setaria italica Si001731m.g I 0.795
OB02G40680 Oryza brachyantha OB02G40680 I 0.795
GRMZM2G033413 Zea mays GRMZM2G033413 I 0.795
OLONG_001053 Oryza longistaminata OLONG_001053 I 0.795
BZIP46 Oryza sativa OS06G0211200 I 0.794
ORUFI12G20810 Oryza rufipogon ORUFI12G20810 I 0.794
SELMODRAFT_266892 Selaginella moellendorffii SELMODRAFT_266892 I 0.793
LPERR02G27610 Leersia perrieri LPERR02G27610 I 0.791
Sb08g003760 Sorghum bicolor Sb08g003760 I 0.791
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I 0.790
Lus10017049.g Linum usitatissimum Lus10017049.g I 0.790
ONIVA04G25730 Oryza nivara ONIVA04G25730 I 0.790
Lus10021369.g Linum usitatissimum Lus10021369.g I 0.790
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I 0.790
OBART01G37980 Oryza barthii OBART01G37980 I 0.790
GLYMA10G08370 Glycine max GLYMA10G08370 I 0.788
cassava32856.m1 Manihot esculenta cassava32856.m1 I 0.788
cassava11518.m1 Manihot esculenta cassava11518.m1 I 0.788
GLYMA13G22061 Glycine max GLYMA13G22061 I 0.788
29625.m000702 Ricinus communis 29625.m000702 I 0.788
Lus10014194.g Linum usitatissimum Lus10014194.g I 0.788
Lus10009755.g Linum usitatissimum Lus10009755.g I 0.788
ABI5 Populus trichocarpa POPTR_0006s08300 I 0.788
Lus10022720.g Linum usitatissimum Lus10022720.g I 0.788
mgf002176m Mimulus guttatus mgf002176m I 0.787
Pm026185 Prunus mume Pm026185 I 0.787
Cucsa.385090 Cucumis sativus Cucsa.385090 I 0.787
DPBF2 Vitis vinifera VIT_06s0080g00340 I 0.786
Cucsa.241090 Cucumis sativus Cucsa.241090 I 0.786
SELMODRAFT_177659 Selaginella moellendorffii SELMODRAFT_177659 I 0.784
BRADI3G00300 Brachypodium distachyon BRADI3G00300 I 0.784
SELMODRAFT_91900 Selaginella moellendorffii SELMODRAFT_91900 I 0.782
SELMODRAFT_94516 Selaginella moellendorffii SELMODRAFT_94516 I 0.782
Gorai.002G240500 Gossypium raimondii Gorai.002G240500 I 0.782