Gorai.013G044500 (Gossypium raimondii)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Gorai.013G044500 T071992_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ABF3
M01782_2.00
Arabidopsis thaliana
ACACGTGT

ACACGTGT
PBM
Weirauch et al.(2014)
pTH7240
0.809 0.736
PK18009.1
M01158_2.00
Cannabis sativa
NNACACGTGN

NCACGTGTNN
PBM
Lambert et al.(2019)
pTH10272
0.872 0.855
ABF3
M09912_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF3_Q2
0.809 0.736
ABF4
M01056_2.00
Arabidopsis thaliana
NNMCACGTGKNN

NNMCACGTGKNN
PBM
Sullivan et al.(2014)
pTH7315
0.850 0.758
ABF4
M01057_2.00
Arabidopsis thaliana
NDMYAVNWNN

NNWNBTRKHN
PBM
Sullivan et al.(2014)
pTH7551
0.850 0.758
OS08G0471950
M10047_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TRAB1_Q2
0.806 0.755
ABF4
M09911_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF4_Q2
0.850 0.758
ABF1
M01772_2.00
Arabidopsis thaliana
NNMCACGTGNN

NNCACGTGKNN
PBM
Weirauch et al.(2014)
pTH8837
0.815 0.645
ABF2
M01771_2.00
Arabidopsis thaliana
NNYACGTGTHNNN

NNNDACACGTRNN
PBM
Weirauch et al.(2014)
pTH8103
0.801 0.736
ABF1
M01773_2.00
Arabidopsis thaliana
NMCACGTGKN

NMCACGTGKN
PBM
Weirauch et al.(2014)
pTH8853
0.815 0.645
ABF2
M06755_2.00
Arabidopsis thaliana
NNWNNTGMCACGTSWBMH

DKVWSACGTGKCANNWNN
Dap-seq
OMalley et al.(2016)
ABF2_col_v3a
0.801 0.736
ABF1
M02656_2.00
Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC

GRHCACGTGGCVVVVVVVV
SELEX
Mathelier et al.(2014)
MA0570.1
0.815 0.645
ABF1
M09906_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_01
0.815 0.645
ABF1
M09907_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_02
0.815 0.645
ABF1
M09908_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_03
0.815 0.645
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.013G044500.1 bZIP 328 389
Gorai.013G044500.2 bZIP 328 389
Gorai.013G044500.3 bZIP 328 381
Gorai.013G044500.4 bZIP 328 389
Gorai.013G044500.5 bZIP 328 389
Gorai.013G044500.6 bZIP 328 352

Links

Other bZIP family TFs
Other Gossypium raimondii TFs

245 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TCM_007074 Theobroma cacao TCM_007074 I 0.884
MDP0000248567 Malus domestica MDP0000248567 I 0.884
PK18009.1 Cannabis sativa PK18009.1 D 0.872
mgf014602m Mimulus guttatus mgf014602m I 0.865
mgf007524m Mimulus guttatus mgf007524m I 0.865
mgf002047m Mimulus guttatus mgf002047m I 0.865
SapurV1A.3185s0030 Salix purpurea SapurV1A.3185s0030 I 0.860
SapurV1A.0643s0160 Salix purpurea SapurV1A.0643s0160 I 0.860
evm.TU.supercontig_62.4 Carica papaya evm.TU.supercontig_62.4 I 0.851
ABF4 Arabidopsis thaliana AT3G19290 D 0.850
Bostr.19424s0732 Boechera stricta Bostr.19424s0732 I 0.849
TCM_033824 Theobroma cacao TCM_033824 I 0.847
Pm021430 Prunus mume Pm021430 I 0.843
PRUPE_ppa006752mg Prunus persica PRUPE_ppa006752mg I 0.843
gene28250-v1.0-hybrid Fragaria vesca gene28250-v1.0-hybrid I 0.843
Si030114m.g Setaria italica Si030114m.g I 0.840
Cucsa.219780 Cucumis sativus Cucsa.219780 I 0.839
ORGLA09G0097200 Oryza glaberrima ORGLA09G0097200 I 0.839
OPUNC09G11090 Oryza punctata OPUNC09G11090 I 0.839
BGIOSGA030899 Oryza indica BGIOSGA030899 I 0.839
OGLUM09G13130 Oryza glumaepatula OGLUM09G13130 I 0.839
OS09G0456200 Oryza sativa OS09G0456200 I 0.839
Bra037533 Brassica rapa Bra037533 I 0.839
Cla016272 Citrullus lanatus Cla016272 I 0.839
Bo5g115300 Brassica oleracea Bo5g115300 I 0.839
Thhalv10020772m.g Eutrema salsugineum Thhalv10020772m.g I 0.839
OMERI09G10130 Oryza meridionalis OMERI09G10130 I 0.839
Bra022409 Brassica rapa Bra022409 I 0.839
Gorai.005G237400 Gossypium raimondii Gorai.005G237400 I 0.838
Pavir.Fa00674 Panicum virgatum Pavir.Fa00674 I 0.838
Si013904m.g Setaria italica Si013904m.g I 0.837
AMTR_s00114p00031980 Amborella trichopoda AMTR_s00114p00031980 I 0.836
Cagra.4978s0002 Capsella grandiflora Cagra.4978s0002 I 0.834
Carubv10013729m.g Capsella rubella Carubv10013729m.g I 0.834
ABF4 Arabidopsis lyrata fgenesh2_kg.3__2145__AT3G19290.1 I 0.834
Lus10014066.g Linum usitatissimum Lus10014066.g I 0.834
Sb07g022965 Sorghum bicolor Sb07g022965 I 0.833
PGSC0003DMG400006211 Solanum tuberosum PGSC0003DMG400006211 I 0.832
Pavir.Ba02029 Panicum virgatum Pavir.Ba02029 I 0.831
POPTR_0009s10400 Populus trichocarpa POPTR_0009s10400 I 0.831
LPERR09G09170 Leersia perrieri LPERR09G09170 I 0.831
cassava42743.valid.m1 Manihot esculenta cassava42743.valid.m1 I 0.830
Cagra.2481s0016 Capsella grandiflora Cagra.2481s0016 I 0.830
cassava42744.valid.m1 Manihot esculenta cassava42744.valid.m1 I 0.830
cassava42745.valid.m1 Manihot esculenta cassava42745.valid.m1 I 0.830
GSMUA_Achr3G07000_001 Musa acuminata GSMUA_Achr3G07000_001 I 0.830
PGSC0003DMG400008011 Solanum tuberosum PGSC0003DMG400008011 I 0.828
Pavir.Fb01750 Panicum virgatum Pavir.Fb01750 I 0.828
Thhalv10012271m.g Eutrema salsugineum Thhalv10012271m.g I 0.827
ABF1 Arabidopsis lyrata fgenesh2_kg.1__4055__AT1G49720.1 I 0.827
Bo3g073080 Brassica oleracea Bo3g073080 I 0.826
PGSC0003DMG400025889 Solanum tuberosum PGSC0003DMG400025889 I 0.825
Lus10002399.g Linum usitatissimum Lus10002399.g I 0.825
GSMUA_Achr9G27130_001 Musa acuminata GSMUA_Achr9G27130_001 I 0.825
Solyc01g108080.2 Solanum lycopersicum Solyc01g108080.2 I 0.825
PK02169.1 Cannabis sativa PK02169.1 I 0.825
OB08G24950 Oryza brachyantha OB08G24950 I 0.824
evm.TU.supercontig_49.26 Carica papaya evm.TU.supercontig_49.26 I 0.824
orange1.1g021624m.g Citrus sinensis orange1.1g021624m.g I 0.824
MDP0000296303 Malus domestica MDP0000296303 I 0.824
orange1.1g025340m.g Citrus sinensis orange1.1g025340m.g I 0.823
AMTR_s00132p00065700 Amborella trichopoda AMTR_s00132p00065700 I 0.823
Thhalv10025203m.g Eutrema salsugineum Thhalv10025203m.g I 0.823
BRADI3G38200 Brachypodium distachyon BRADI3G38200 I 0.823
29801.m003176 Ricinus communis 29801.m003176 I 0.823
Ciclev10001159m.g Citrus clementina Ciclev10001159m.g I 0.823
ABF2 Vitis vinifera VIT_18s0001g10450 I 0.822
Gorai.008G024700 Gossypium raimondii Gorai.008G024700 I 0.822
MTR_3g101780 Medicago truncatula MTR_3g101780 I 0.822
30170.m013868 Ricinus communis 30170.m013868 I 0.821
SapurV1A.0167s0060 Salix purpurea SapurV1A.0167s0060 I 0.821
Eucgr.F02337 Eucalyptus grandis Eucgr.F02337 I 0.821
cassava12275.valid.m1 Manihot esculenta cassava12275.valid.m1 I 0.821
cassava42669.valid.m1 Manihot esculenta cassava42669.valid.m1 I 0.821
SapurV1A.0878s0160 Salix purpurea SapurV1A.0878s0160 I 0.821
POPTR_0014s02810 Populus trichocarpa POPTR_0014s02810 I 0.821
POPTR_0002s12710 Populus trichocarpa POPTR_0002s12710 I 0.821
PGSC0003DMG400022931 Solanum tuberosum PGSC0003DMG400022931 I 0.820
Solyc11g044560.1 Solanum lycopersicum Solyc11g044560.1 I 0.820
Ca_01548 Cicer arietinum Ca_01548 I 0.819
GLYMA06G04353 Glycine max GLYMA06G04353 I 0.819
LPERR08G14740 Leersia perrieri LPERR08G14740 I 0.819
GLYMA04G04170 Glycine max GLYMA04G04170 I 0.819
GRMZM2G157722 Zea mays GRMZM2G157722 I 0.818
GRMZM2G478417 Zea mays GRMZM2G478417 I 0.818
Ciclev10028435m.g Citrus clementina Ciclev10028435m.g I 0.817
orange1.1g013197m.g Citrus sinensis orange1.1g013197m.g I 0.817
GSMUA_Achr6G30550_001 Musa acuminata GSMUA_Achr6G30550_001 I 0.817
Bo7g116570 Brassica oleracea Bo7g116570 I 0.817
Cla022926 Citrullus lanatus Cla022926 I 0.816
Solyc10g050210.1 Solanum lycopersicum Solyc10g050210.1 I 0.816
mgf020824m Mimulus guttatus mgf020824m I 0.816
gene09110-v1.0-hybrid Fragaria vesca gene09110-v1.0-hybrid I 0.816
Gorai.009G275700 Gossypium raimondii Gorai.009G275700 I 0.816
GRMZM2G002075 Zea mays GRMZM2G002075 I 0.816
Cucsa.396070 Cucumis sativus Cucsa.396070 I 0.816
OGLUM02G34210 Oryza glumaepatula OGLUM02G34210 I 0.815
OMERI02G32150 Oryza meridionalis OMERI02G32150 I 0.815
Bostr.7867s1253 Boechera stricta Bostr.7867s1253 I 0.815
ABF3 Arabidopsis lyrata fgenesh2_kg.7__705__AT4G34000.1 I 0.815
ORGLA02G0292000 Oryza glaberrima ORGLA02G0292000 I 0.815
ONIVA02G33490 Oryza nivara ONIVA02G33490 I 0.815
ABF3 Arabidopsis thaliana AT4G34000 D 0.815
ORUFI02G35260 Oryza rufipogon ORUFI02G35260 I 0.815
ABF1 Arabidopsis thaliana AT1G49720 D 0.815
BZIP23 Oryza sativa OS02G0766700 I 0.815
Cagra.1305s0026 Capsella grandiflora Cagra.1305s0026 I 0.815
Carubv10006251m.g Capsella rubella Carubv10006251m.g I 0.815
BGIOSGA005551 Oryza indica BGIOSGA005551 I 0.815
Lus10027897.g Linum usitatissimum Lus10027897.g I 0.814
OB09G19140 Oryza brachyantha OB09G19140 I 0.814
Solyc04g078840.2 Solanum lycopersicum Solyc04g078840.2 I 0.813
BGIOSGA028831 Oryza indica BGIOSGA028831 I 0.813
OPUNC08G15700 Oryza punctata OPUNC08G15700 I 0.813
ORUFI08G19970 Oryza rufipogon ORUFI08G19970 I 0.813
Gorai.005G102300 Gossypium raimondii Gorai.005G102300 I 0.813
ORGLA08G0211300 Oryza glaberrima ORGLA08G0211300 I 0.813
MLOC_66546 Hordeum vulgare MLOC_66546 I 0.812
GSMUA_Achr3G22710_001 Musa acuminata GSMUA_Achr3G22710_001 I 0.811
TRIUR3_26781 Triticum urartu TRIUR3_26781 I 0.811
GSMUA_Achr5G05690_001 Musa acuminata GSMUA_Achr5G05690_001 I 0.810
Bo1g007700 Brassica oleracea Bo1g007700 I 0.810
GLYMA07G33600 Glycine max GLYMA07G33600 I 0.810
Eucgr.G01436 Eucalyptus grandis Eucgr.G01436 I 0.810
OBART02G33770 Oryza barthii OBART02G33770 I 0.810
Sb06g026410 Sorghum bicolor Sb06g026410 I 0.809
Ca_06458 Cicer arietinum Ca_06458 I 0.808
MTR_4g085910 Medicago truncatula MTR_4g085910 I 0.808
ORUFI12G20810 Oryza rufipogon ORUFI12G20810 I 0.807
Carubv10009177m.g Capsella rubella Carubv10009177m.g I 0.807
Cagra.10917s0002 Capsella grandiflora Cagra.10917s0002 I 0.807
ABF2 Arabidopsis lyrata fgenesh2_kg.1__3804__AT1G45249.1 I 0.807
BZIP46 Oryza sativa OS06G0211200 I 0.807
OGLUM08G18640 Oryza glumaepatula OGLUM08G18640 I 0.807
GSMUA_Achr8G07740_001 Musa acuminata GSMUA_Achr8G07740_001 I 0.807
Bra040260 Brassica rapa Bra040260 I 0.807
Thhalv10011493m.g Eutrema salsugineum Thhalv10011493m.g I 0.807
ABF2 Arabidopsis thaliana AT1G45249 D 0.807
Bo6g006970 Brassica oleracea Bo6g006970 I 0.807
VIT_03s0063g00310 Vitis vinifera VIT_03s0063g00310 I 0.806
Sb04g034190 Sorghum bicolor Sb04g034190 I 0.806
LjT07K13.110.nd Lotus japonicus LjT07K13.110.nd I 0.806
Bo1g114840 Brassica oleracea Bo1g114840 I 0.806
GSMUA_Achr5G24570_001 Musa acuminata GSMUA_Achr5G24570_001 I 0.806
OS08G0471950 Oryza sativa OS08G0471950 D 0.806
ONIVA08G19830 Oryza nivara ONIVA08G19830 I 0.805
OLONG_000475 Oryza longistaminata OLONG_000475 I 0.805
OBART08G17810 Oryza barthii OBART08G17810 I 0.805
TRAES3BF111600160CFD_g Triticum aestivum TRAES3BF111600160CFD_g I 0.804
GSMUA_Achr6G04270_001 Musa acuminata GSMUA_Achr6G04270_001 I 0.804
Bra011485 Brassica rapa Bra011485 I 0.804
PRUPE_ppa006503mg Prunus persica PRUPE_ppa006503mg I 0.803
OMERI01G34950 Oryza meridionalis OMERI01G34950 I 0.802
LPERR01G32620 Leersia perrieri LPERR01G32620 I 0.802
OB01G46760 Oryza brachyantha OB01G46760 I 0.802
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I 0.802
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I 0.802
ONIVA04G25730 Oryza nivara ONIVA04G25730 I 0.802
OLONG_014546 Oryza longistaminata OLONG_014546 I 0.802
Gorai.009G212600 Gossypium raimondii Gorai.009G212600 I 0.802
OBART01G37980 Oryza barthii OBART01G37980 I 0.802
ORGLA01G0317900 Oryza glaberrima ORGLA01G0317900 I 0.802
BGIOSGA004837 Oryza indica BGIOSGA004837 I 0.802
OS01G0859300 Oryza sativa OS01G0859300 I 0.802
Pavir.J35078 Panicum virgatum Pavir.J35078 I 0.802
Pm005288 Prunus mume Pm005288 I 0.802
GRMZM2G168079 Zea mays GRMZM2G168079 I 0.802
OLONG_001053 Oryza longistaminata OLONG_001053 I 0.801
MDP0000701734 Malus domestica MDP0000701734 I 0.801
F775_32479 Aegilops tauschii F775_32479 I 0.800
29625.m000702 Ricinus communis 29625.m000702 I 0.800
Lus10014194.g Linum usitatissimum Lus10014194.g I 0.800
TRAES3BF111600130CFD_g Triticum aestivum TRAES3BF111600130CFD_g I 0.800
Carubv10009399m.g Capsella rubella Carubv10009399m.g I 0.800
Bostr.26675s0197 Boechera stricta Bostr.26675s0197 I 0.800
Bra018800 Brassica rapa Bra018800 I 0.800
Traes_3AL_FC5523394 Triticum aestivum Traes_3AL_FC5523394 I 0.800
Bo6g018480 Brassica oleracea Bo6g018480 I 0.800
TRAES3BF099600130CFD_g Triticum aestivum TRAES3BF099600130CFD_g I 0.800
MLOC_34679 Hordeum vulgare MLOC_34679 I 0.800
Lus10022720.g Linum usitatissimum Lus10022720.g I 0.800
Sb08g003760 Sorghum bicolor Sb08g003760 I 0.799
Pavir.J00256 Panicum virgatum Pavir.J00256 I 0.799
SapurV1A.0374s0070 Salix purpurea SapurV1A.0374s0070 I 0.798
POPTR_0009s16610 Populus trichocarpa POPTR_0009s16610 I 0.798
30055.m001548 Ricinus communis 30055.m001548 I 0.797
LPERR06G06440 Leersia perrieri LPERR06G06440 I 0.797
Cucsa.385090 Cucumis sativus Cucsa.385090 I 0.797
OMERI06G08210 Oryza meridionalis OMERI06G08210 I 0.797
OPUNC06G06690 Oryza punctata OPUNC06G06690 I 0.797
OB06G16510 Oryza brachyantha OB06G16510 I 0.797
cassava16074.m1 Manihot esculenta cassava16074.m1 I 0.797
BGIOSGA040605 Oryza indica BGIOSGA040605 I 0.797
ONIVA06G08350 Oryza nivara ONIVA06G08350 I 0.797
ORGLA06G0066000 Oryza glaberrima ORGLA06G0066000 I 0.797
OGLUM06G07500 Oryza glumaepatula OGLUM06G07500 I 0.797
BRADI4G32090 Brachypodium distachyon BRADI4G32090 I 0.797
OBART06G07070 Oryza barthii OBART06G07070 I 0.797
BGIOSGA022536 Oryza indica BGIOSGA022536 I 0.797
ABI5 Arabidopsis thaliana AT2G36270 D 0.796
Si017618m.g Setaria italica Si017618m.g I 0.796
cassava32856.m1 Manihot esculenta cassava32856.m1 I 0.796
Aquca_007_00660 Aquilegia coerulea Aquca_007_00660 I 0.795
LPERR02G27610 Leersia perrieri LPERR02G27610 I 0.795
OB02G40680 Oryza brachyantha OB02G40680 I 0.795
Pavir.Da01931 Panicum virgatum Pavir.Da01931 I 0.794
GRMZM2G033413 Zea mays GRMZM2G033413 I 0.794
Si006889m.g Setaria italica Si006889m.g I 0.794
Eucgr.I01145 Eucalyptus grandis Eucgr.I01145 I 0.793
Cucsa.241090 Cucumis sativus Cucsa.241090 I 0.793
Bostr.12302s0127 Boechera stricta Bostr.12302s0127 I 0.792
SELMODRAFT_443424 Selaginella moellendorffii SELMODRAFT_443424 I 0.792
Lus10021369.g Linum usitatissimum Lus10021369.g I 0.791
cassava11518.m1 Manihot esculenta cassava11518.m1 I 0.791
TCM_022574 Theobroma cacao TCM_022574 I 0.791
GLYMA13G22061 Glycine max GLYMA13G22061 I 0.790
ABI5 Populus trichocarpa POPTR_0006s08300 I 0.790
GLYMA10G08370 Glycine max GLYMA10G08370 I 0.790
mgf002176m Mimulus guttatus mgf002176m I 0.790
TRIUR3_33995 Triticum urartu TRIUR3_33995 I 0.790
Lus10009755.g Linum usitatissimum Lus10009755.g I 0.790
SELMODRAFT_266892 Selaginella moellendorffii SELMODRAFT_266892 I 0.788
Sb10g007090 Sorghum bicolor Sb10g007090 I 0.788
Lus10017049.g Linum usitatissimum Lus10017049.g I 0.788
Lus10006489.g Linum usitatissimum Lus10006489.g I 0.788
TRIUR3_31111 Triticum urartu TRIUR3_31111 I 0.788
OPUNC01G36800 Oryza punctata OPUNC01G36800 I 0.787
Pm001315 Prunus mume Pm001315 I 0.787
TCM_034992 Theobroma cacao TCM_034992 I 0.786
Ca_00791 Cicer arietinum Ca_00791 I 0.786
MTR_7g104480 Medicago truncatula MTR_7g104480 I 0.786
DPBF2 Vitis vinifera VIT_06s0080g00340 I 0.785
cassava17300.m1 Manihot esculenta cassava17300.m1 I 0.785
Pavir.J31353 Panicum virgatum Pavir.J31353 I 0.784
Solyc09g009490.2 Solanum lycopersicum Solyc09g009490.2 I 0.784
OPUNC05G18710 Oryza punctata OPUNC05G18710 I 0.783
Aquca_072_00142 Aquilegia coerulea Aquca_072_00142 I 0.783
OS03G0322700 Oryza sativa OS03G0322700 I 0.783
Gorai.010G045600 Gossypium raimondii Gorai.010G045600 N 0.782
Gorai.002G240500 Gossypium raimondii Gorai.002G240500 I 0.782
mgf015092m Mimulus guttatus mgf015092m I 0.782
evm.TU.supercontig_5.28 Carica papaya evm.TU.supercontig_5.28 I 0.782
Gorai.006G155600 Gossypium raimondii Gorai.006G155600 I 0.782
PGSC0003DMG400002660 Solanum tuberosum PGSC0003DMG400002660 I 0.782