29801.m003176 (Ricinus communis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 29801.m003176 T070510_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ABF3
M01782_2.00 		Arabidopsis thaliana
ACACGTGT
ACACGTGT		 PBM
Weirauch et al.(2014)
pTH7240 		0.842 0.770
ABF3
M09912_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF3_Q2 		0.842 0.770
ABF4
M01056_2.00 		Arabidopsis thaliana
NNMCACGTGKNN
NNMCACGTGKNN		 PBM
Sullivan et al.(2014)
pTH7315 		0.817 0.672
ABF4
M01057_2.00 		Arabidopsis thaliana
NDMYAVNWNN
NNWNBTRKHN		 PBM
Sullivan et al.(2014)
pTH7551 		0.817 0.672
ABF4
M09911_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF4_Q2 		0.817 0.672
PK18009.1
M01158_2.00 		Cannabis sativa
NNACACGTGN
NCACGTGTNN		 PBM
Lambert et al.(2019)
pTH10272 		0.815 0.689
ABF1
M01772_2.00 		Arabidopsis thaliana
NNMCACGTGNN
NNCACGTGKNN		 PBM
Weirauch et al.(2014)
pTH8837 		0.814 0.623
ABF1
M01773_2.00 		Arabidopsis thaliana
NMCACGTGKN
NMCACGTGKN		 PBM
Weirauch et al.(2014)
pTH8853 		0.814 0.623
ABF1
M02656_2.00 		Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC
GRHCACGTGGCVVVVVVVV		 SELEX
Mathelier et al.(2014)
MA0570.1 		0.814 0.623
ABF1
M09906_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_01 		0.814 0.623
ABF1
M09907_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_02 		0.814 0.623
ABF1
M09908_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_03 		0.814 0.623
OS08G0471950
M10047_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TRAB1_Q2 		0.804 0.623
ABF2
M01771_2.00 		Arabidopsis thaliana
NNYACGTGTHNNN
NNNDACACGTRNN		 PBM
Weirauch et al.(2014)
pTH8103 		0.787 0.623
ABF2
M06755_2.00 		Arabidopsis thaliana
NNWNNTGMCACGTSWBMH
DKVWSACGTGKCANNWNN		 Dap-seq
OMalley et al.(2016)
ABF2_col_v3a 		0.787 0.623
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29801.m003176 bZIP 353 414

Links

Other bZIP family TFs
Other Ricinus communis TFs

217 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VIT_03s0063g00310 Vitis vinifera VIT_03s0063g00310 I 0.851
Bo7g116570 Brassica oleracea Bo7g116570 I 0.849
Gorai.005G237400 Gossypium raimondii Gorai.005G237400 I 0.848
Cagra.1305s0026 Capsella grandiflora Cagra.1305s0026 I 0.842
ABF3 Arabidopsis lyrata fgenesh2_kg.7__705__AT4G34000.1 I 0.842
ABF3 Arabidopsis thaliana AT4G34000 D 0.842
Bostr.7867s1253 Boechera stricta Bostr.7867s1253 I 0.842
Carubv10006251m.g Capsella rubella Carubv10006251m.g I 0.842
GSMUA_Achr5G24570_001 Musa acuminata GSMUA_Achr5G24570_001 I 0.841
Solyc11g044560.1 Solanum lycopersicum Solyc11g044560.1 I 0.833
Bo1g007700 Brassica oleracea Bo1g007700 I 0.833
PGSC0003DMG400022931 Solanum tuberosum PGSC0003DMG400022931 I 0.833
Thhalv10025203m.g Eutrema salsugineum Thhalv10025203m.g I 0.830
Bostr.19424s0732 Boechera stricta Bostr.19424s0732 I 0.828
Si030114m.g Setaria italica Si030114m.g I 0.826
Pm021430 Prunus mume Pm021430 I 0.824
PRUPE_ppa006752mg Prunus persica PRUPE_ppa006752mg I 0.824
gene28250-v1.0-hybrid Fragaria vesca gene28250-v1.0-hybrid I 0.824
MDP0000248567 Malus domestica MDP0000248567 I 0.823
OGLUM09G13130 Oryza glumaepatula OGLUM09G13130 I 0.823
TCM_007074 Theobroma cacao TCM_007074 I 0.823
Ciclev10028435m.g Citrus clementina Ciclev10028435m.g I 0.823
mgf014602m Mimulus guttatus mgf014602m I 0.823
orange1.1g013197m.g Citrus sinensis orange1.1g013197m.g I 0.823
OMERI09G10130 Oryza meridionalis OMERI09G10130 I 0.823
OPUNC09G11090 Oryza punctata OPUNC09G11090 I 0.823
BGIOSGA030899 Oryza indica BGIOSGA030899 I 0.823
ORGLA09G0097200 Oryza glaberrima ORGLA09G0097200 I 0.823
OS09G0456200 Oryza sativa OS09G0456200 I 0.823
Gorai.013G044500 Gossypium raimondii Gorai.013G044500 I 0.823
mgf007524m Mimulus guttatus mgf007524m I 0.823
mgf002047m Mimulus guttatus mgf002047m I 0.823
SapurV1A.3185s0030 Salix purpurea SapurV1A.3185s0030 I 0.822
SapurV1A.0643s0160 Salix purpurea SapurV1A.0643s0160 I 0.822
evm.TU.supercontig_62.4 Carica papaya evm.TU.supercontig_62.4 I 0.822
Pavir.Da01931 Panicum virgatum Pavir.Da01931 I 0.821
Sb04g034190 Sorghum bicolor Sb04g034190 I 0.821
Si006889m.g Setaria italica Si006889m.g I 0.821
GRMZM2G033413 Zea mays GRMZM2G033413 I 0.821
gene09110-v1.0-hybrid Fragaria vesca gene09110-v1.0-hybrid I 0.820
Gorai.008G024700 Gossypium raimondii Gorai.008G024700 I 0.819
Pavir.Ba02029 Panicum virgatum Pavir.Ba02029 I 0.819
Bo3g073080 Brassica oleracea Bo3g073080 I 0.819
Bo5g115300 Brassica oleracea Bo5g115300 I 0.818
Thhalv10020772m.g Eutrema salsugineum Thhalv10020772m.g I 0.818
Bra022409 Brassica rapa Bra022409 I 0.818
Bra037533 Brassica rapa Bra037533 I 0.818
ABF4 Arabidopsis thaliana AT3G19290 D 0.817
Cucsa.219780 Cucumis sativus Cucsa.219780 I 0.817
Pavir.Fb01750 Panicum virgatum Pavir.Fb01750 I 0.816
LPERR09G09170 Leersia perrieri LPERR09G09170 I 0.816
Pavir.Fa00674 Panicum virgatum Pavir.Fa00674 I 0.815
PK18009.1 Cannabis sativa PK18009.1 D 0.815
ABF1 Arabidopsis thaliana AT1G49720 D 0.814
Pavir.J00256 Panicum virgatum Pavir.J00256 I 0.814
Carubv10013729m.g Capsella rubella Carubv10013729m.g I 0.813
Cagra.4978s0002 Capsella grandiflora Cagra.4978s0002 I 0.813
Si013904m.g Setaria italica Si013904m.g I 0.813
GRMZM2G157722 Zea mays GRMZM2G157722 I 0.813
ABF4 Arabidopsis lyrata fgenesh2_kg.3__2145__AT3G19290.1 I 0.813
GRMZM2G478417 Zea mays GRMZM2G478417 I 0.813
PGSC0003DMG400025889 Solanum tuberosum PGSC0003DMG400025889 I 0.812
Solyc01g108080.2 Solanum lycopersicum Solyc01g108080.2 I 0.812
BRADI3G38200 Brachypodium distachyon BRADI3G38200 I 0.812
OB09G19140 Oryza brachyantha OB09G19140 I 0.812
orange1.1g021624m.g Citrus sinensis orange1.1g021624m.g I 0.812
GSMUA_Achr9G27130_001 Musa acuminata GSMUA_Achr9G27130_001 I 0.812
Eucgr.G01436 Eucalyptus grandis Eucgr.G01436 I 0.811
cassava42744.valid.m1 Manihot esculenta cassava42744.valid.m1 I 0.811
MTR_3g101780 Medicago truncatula MTR_3g101780 I 0.811
PK02169.1 Cannabis sativa PK02169.1 I 0.811
cassava42745.valid.m1 Manihot esculenta cassava42745.valid.m1 I 0.811
cassava42743.valid.m1 Manihot esculenta cassava42743.valid.m1 I 0.811
PGSC0003DMG400006211 Solanum tuberosum PGSC0003DMG400006211 I 0.811
GSMUA_Achr6G30550_001 Musa acuminata GSMUA_Achr6G30550_001 I 0.811
GSMUA_Achr5G05690_001 Musa acuminata GSMUA_Achr5G05690_001 I 0.810
BZIP46 Oryza sativa OS06G0211200 I 0.810
Sb07g022965 Sorghum bicolor Sb07g022965 I 0.810
ORUFI12G20810 Oryza rufipogon ORUFI12G20810 I 0.810
Lus10027897.g Linum usitatissimum Lus10027897.g I 0.810
ABF2 Vitis vinifera VIT_18s0001g10450 I 0.810
AMTR_s00132p00065700 Amborella trichopoda AMTR_s00132p00065700 I 0.809
Cagra.2481s0016 Capsella grandiflora Cagra.2481s0016 I 0.809
OB08G24950 Oryza brachyantha OB08G24950 I 0.809
MLOC_66546 Hordeum vulgare MLOC_66546 I 0.809
MDP0000296303 Malus domestica MDP0000296303 I 0.809
29625.m000702 Ricinus communis 29625.m000702 I 0.808
Solyc04g078840.2 Solanum lycopersicum Solyc04g078840.2 I 0.808
Ca_01548 Cicer arietinum Ca_01548 I 0.808
evm.TU.supercontig_49.26 Carica papaya evm.TU.supercontig_49.26 I 0.808
Cla016272 Citrullus lanatus Cla016272 I 0.808
OPUNC08G15700 Oryza punctata OPUNC08G15700 I 0.808
LPERR08G14740 Leersia perrieri LPERR08G14740 I 0.808
ORGLA08G0211300 Oryza glaberrima ORGLA08G0211300 I 0.808
Lus10022720.g Linum usitatissimum Lus10022720.g I 0.808
PGSC0003DMG400008011 Solanum tuberosum PGSC0003DMG400008011 I 0.808
Lus10014194.g Linum usitatissimum Lus10014194.g I 0.808
ORUFI08G19970 Oryza rufipogon ORUFI08G19970 I 0.808
BGIOSGA028831 Oryza indica BGIOSGA028831 I 0.808
GLYMA04G04170 Glycine max GLYMA04G04170 I 0.808
GLYMA06G04353 Glycine max GLYMA06G04353 I 0.808
ABF1 Arabidopsis lyrata fgenesh2_kg.1__4055__AT1G49720.1 I 0.807
orange1.1g025340m.g Citrus sinensis orange1.1g025340m.g I 0.807
Ciclev10001159m.g Citrus clementina Ciclev10001159m.g I 0.807
POPTR_0009s10400 Populus trichocarpa POPTR_0009s10400 I 0.807
OGLUM08G18640 Oryza glumaepatula OGLUM08G18640 I 0.806
SapurV1A.0878s0160 Salix purpurea SapurV1A.0878s0160 I 0.806
SapurV1A.0167s0060 Salix purpurea SapurV1A.0167s0060 I 0.806
POPTR_0002s12710 Populus trichocarpa POPTR_0002s12710 I 0.806
Carubv10009399m.g Capsella rubella Carubv10009399m.g I 0.806
Sb06g026410 Sorghum bicolor Sb06g026410 I 0.806
POPTR_0014s02810 Populus trichocarpa POPTR_0014s02810 I 0.806
30170.m013868 Ricinus communis 30170.m013868 I 0.806
cassava42669.valid.m1 Manihot esculenta cassava42669.valid.m1 I 0.806
Eucgr.F02337 Eucalyptus grandis Eucgr.F02337 I 0.806
cassava12275.valid.m1 Manihot esculenta cassava12275.valid.m1 I 0.806
Thhalv10012271m.g Eutrema salsugineum Thhalv10012271m.g I 0.806
LjT07K13.110.nd Lotus japonicus LjT07K13.110.nd I 0.805
GSMUA_Achr3G07000_001 Musa acuminata GSMUA_Achr3G07000_001 I 0.805
OLONG_001053 Oryza longistaminata OLONG_001053 I 0.805
Lus10014066.g Linum usitatissimum Lus10014066.g I 0.804
Cucsa.396070 Cucumis sativus Cucsa.396070 I 0.804
Cla022926 Citrullus lanatus Cla022926 I 0.804
OS08G0471950 Oryza sativa OS08G0471950 D 0.804
Lus10002399.g Linum usitatissimum Lus10002399.g I 0.804
MTR_4g085910 Medicago truncatula MTR_4g085910 I 0.802
GRMZM2G002075 Zea mays GRMZM2G002075 I 0.801
PRUPE_ppa006503mg Prunus persica PRUPE_ppa006503mg I 0.801
TCM_033824 Theobroma cacao TCM_033824 I 0.801
Bostr.26675s0197 Boechera stricta Bostr.26675s0197 I 0.800
mgf020824m Mimulus guttatus mgf020824m I 0.800
Pm001315 Prunus mume Pm001315 I 0.799
Bra011485 Brassica rapa Bra011485 I 0.799
Sb08g003760 Sorghum bicolor Sb08g003760 I 0.799
AMTR_s00114p00031980 Amborella trichopoda AMTR_s00114p00031980 I 0.799
OBART02G33770 Oryza barthii OBART02G33770 I 0.798
ABI5 Arabidopsis thaliana AT2G36270 D 0.798
Ca_06458 Cicer arietinum Ca_06458 I 0.798
Gorai.009G275700 Gossypium raimondii Gorai.009G275700 I 0.797
OLONG_000475 Oryza longistaminata OLONG_000475 I 0.797
Gorai.005G102300 Gossypium raimondii Gorai.005G102300 I 0.797
ONIVA08G19830 Oryza nivara ONIVA08G19830 I 0.797
Gorai.009G212600 Gossypium raimondii Gorai.009G212600 I 0.797
ORGLA02G0292000 Oryza glaberrima ORGLA02G0292000 I 0.796
Si017618m.g Setaria italica Si017618m.g I 0.796
Solyc10g050210.1 Solanum lycopersicum Solyc10g050210.1 I 0.795
Pm005288 Prunus mume Pm005288 I 0.794
OBART08G17810 Oryza barthii OBART08G17810 I 0.794
GLYMA07G33600 Glycine max GLYMA07G33600 I 0.794
Lus10017049.g Linum usitatissimum Lus10017049.g I 0.794
TCM_022574 Theobroma cacao TCM_022574 I 0.793
Thhalv10011493m.g Eutrema salsugineum Thhalv10011493m.g I 0.793
Si001731m.g Setaria italica Si001731m.g I 0.792
BZIP23 Oryza sativa OS02G0766700 I 0.791
TCM_034992 Theobroma cacao TCM_034992 I 0.791
Carubv10009177m.g Capsella rubella Carubv10009177m.g I 0.791
ORUFI02G35260 Oryza rufipogon ORUFI02G35260 I 0.791
OMERI02G32150 Oryza meridionalis OMERI02G32150 I 0.791
BGIOSGA005551 Oryza indica BGIOSGA005551 I 0.791
OGLUM02G34210 Oryza glumaepatula OGLUM02G34210 I 0.791
Cagra.10917s0002 Capsella grandiflora Cagra.10917s0002 I 0.791
ONIVA02G33490 Oryza nivara ONIVA02G33490 I 0.791
cassava16074.m1 Manihot esculenta cassava16074.m1 I 0.790
POPTR_0009s16610 Populus trichocarpa POPTR_0009s16610 I 0.790
SapurV1A.0374s0070 Salix purpurea SapurV1A.0374s0070 I 0.790
TRIUR3_29638 Triticum urartu TRIUR3_29638 I 0.790
30055.m001548 Ricinus communis 30055.m001548 I 0.790
OB02G40680 Oryza brachyantha OB02G40680 I 0.790
Sb10g007090 Sorghum bicolor Sb10g007090 I 0.789
TRIUR3_26781 Triticum urartu TRIUR3_26781 I 0.789
GSMUA_Achr6G04270_001 Musa acuminata GSMUA_Achr6G04270_001 I 0.789
GLYMA13G22061 Glycine max GLYMA13G22061 I 0.789
BRADI4G32090 Brachypodium distachyon BRADI4G32090 I 0.789
Lus10009755.g Linum usitatissimum Lus10009755.g I 0.788
GSMUA_Achr3G22710_001 Musa acuminata GSMUA_Achr3G22710_001 I 0.788
Sb03g040510 Sorghum bicolor Sb03g040510 I 0.788
cassava11518.m1 Manihot esculenta cassava11518.m1 I 0.788
F775_32479 Aegilops tauschii F775_32479 I 0.787
ABF2 Arabidopsis lyrata fgenesh2_kg.1__3804__AT1G45249.1 I 0.787
Bo6g018480 Brassica oleracea Bo6g018480 I 0.787
mgf002176m Mimulus guttatus mgf002176m I 0.787
TRAES3BF111600160CFD_g Triticum aestivum TRAES3BF111600160CFD_g I 0.787
ABF2 Arabidopsis thaliana AT1G45249 D 0.787
TRIUR3_31111 Triticum urartu TRIUR3_31111 I 0.787
Bra040260 Brassica rapa Bra040260 I 0.787
TRAES3BF111600130CFD_g Triticum aestivum TRAES3BF111600130CFD_g I 0.787
Bo6g006970 Brassica oleracea Bo6g006970 I 0.787
MLOC_34679 Hordeum vulgare MLOC_34679 I 0.787
TRAES3BF099600130CFD_g Triticum aestivum TRAES3BF099600130CFD_g I 0.787
Bo1g114840 Brassica oleracea Bo1g114840 I 0.787
Traes_3AL_FC5523394 Triticum aestivum Traes_3AL_FC5523394 I 0.787
LPERR01G32620 Leersia perrieri LPERR01G32620 I 0.785
BGIOSGA004837 Oryza indica BGIOSGA004837 I 0.785
GSMUA_Achr8G07740_001 Musa acuminata GSMUA_Achr8G07740_001 I 0.785
OLONG_014546 Oryza longistaminata OLONG_014546 I 0.785
OB01G46760 Oryza brachyantha OB01G46760 I 0.785
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I 0.785
OS01G0859300 Oryza sativa OS01G0859300 I 0.785
ABI5 Populus trichocarpa POPTR_0006s08300 I 0.785
ONIVA04G25730 Oryza nivara ONIVA04G25730 I 0.785
ORGLA01G0317900 Oryza glaberrima ORGLA01G0317900 I 0.785
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I 0.785
OMERI01G34950 Oryza meridionalis OMERI01G34950 I 0.785
OBART01G37980 Oryza barthii OBART01G37980 I 0.785
Pavir.J35078 Panicum virgatum Pavir.J35078 I 0.784
SELMODRAFT_266892 Selaginella moellendorffii SELMODRAFT_266892 I 0.784
GRMZM2G168079 Zea mays GRMZM2G168079 I 0.784
Bra018800 Brassica rapa Bra018800 I 0.784
Aquca_072_00142 Aquilegia coerulea Aquca_072_00142 I 0.783
DPBF2 Vitis vinifera VIT_06s0080g00340 I 0.783
mgf015092m Mimulus guttatus mgf015092m I 0.783
MLOC_20326 Hordeum vulgare MLOC_20326 N 0.783
TRIUR3_23754 Triticum urartu TRIUR3_23754 N 0.783
Lus10006489.g Linum usitatissimum Lus10006489.g I 0.783
Traes_7DS_C6A3C10A6 Triticum aestivum Traes_7DS_C6A3C10A6 N 0.783
Pavir.J31353 Panicum virgatum Pavir.J31353 I 0.782
VIT_18s0001g04500 Vitis vinifera VIT_18s0001g04500 I 0.782